MELO3C034656 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034656
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	ATP-dependent Clp protease ATP-binding subunit ClpC
Location	chr11: 8207496 .. 8207711 (-)
RNA-Seq Expression	MELO3C034656
Synteny	MELO3C034656

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTATAACCTTGGATATGGGCCTTCTTGTAACTGGCACAAAATATCGTGGGGAGTTTGAAGAAAGATTAAAGAAACTGATGGAGGAAATAAAAAAAAGTGATGAAATAATTCTATTTATTGATGAGGTGCATACATTAATTGGAGCAGGGGCTGCAGAAGGAGCTATTGATGCAGCAAACATATTAAAACCTGCCCTTGCAAGGGGTGAACTGCAG

mRNA sequence

GTTATAACCTTGGATATGGGCCTTCTTGTAACTGGCACAAAATATCGTGGGGAGTTTGAAGAAAGATTAAAGAAACTGATGGAGGAAATAAAAAAAAGTGATGAAATAATTCTATTTATTGATGAGGTGCATACATTAATTGGAGCAGGGGCTGCAGAAGGAGCTATTGATGCAGCAAACATATTAAAACCTGCCCTTGCAAGGGGTGAACTGCAG

Coding sequence (CDS)

ATGGGCCTTCTTGTAACTGGCACAAAATATCGTGGGGAGTTTGAAGAAAGATTAAAGAAACTGATGGAGGAAATAAAAAAAAGTGATGAAATAATTCTATTTATTGATGAGGTGCATACATTAATTGGAGCAGGGGCTGCAGAAGGAGCTATTGATGCAGCAAACATATTAAAACCTGCCCTTGCAAGGGGTGAACTGCAG

Protein sequence

MGLLVTGTKYRGEFEERLKKLMEEIKKSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQ

Homology

[Close]

BLAST of MELO3C034656 vs. NCBI nr
Match: KAA0066397.1 (chaperone protein ClpC [Cucumis melo var. makuwa] >TYK00888.1 chaperone protein ClpC [Cucumis melo var. makuwa])

HSP 1 Score: 129.4 bits (324), Expect = 1.1e-26
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MGLLVTGTKYRGEFEERLKKLMEEIKKSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 60
          MGLLVTGTKYRGEFEERLKKLMEEIKKSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA
Sbjct: 28 MGLLVTGTKYRGEFEERLKKLMEEIKKSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 87

Query: 61 LARGELQ 68
          LARGELQ
Sbjct: 88 LARGELQ 94

[Close]

BLAST of MELO3C034656 vs. NCBI nr
Match: KAF5807089.1 (putative ClpA/B family, UVR domain, AAA+ ATPase domain, Clp ATPase [Helianthus annuus])

HSP 1 Score: 125.9 bits (315), Expect = 1.3e-25
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1   MGLLVTGTKYRGEFEERLKKLMEEIKKSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 60
           MGLLV GTKYRGEFEERLKKLMEEIK+SDEIILFIDEVHTLIGAGAAEGAIDAANILKPA
Sbjct: 106 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 165

Query: 61  LARGELQ 68
           LARGELQ
Sbjct: 166 LARGELQ 172

[Close]

BLAST of MELO3C034656 vs. NCBI nr
Match: VAI29239.1 (unnamed protein product [Triticum turgidum subsp. durum])

HSP 1 Score: 125.9 bits (315), Expect = 1.3e-25
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1   MGLLVTGTKYRGEFEERLKKLMEEIKKSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 60
           MGLLV GTKYRGEFEERLKKLMEEIK+SDEIILFIDEVHTLIGAGAAEGAIDAANILKPA
Sbjct: 306 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 365

Query: 61  LARGELQ 68
           LARGELQ
Sbjct: 366 LARGELQ 372

[Close]

BLAST of MELO3C034656 vs. NCBI nr
Match: KAF5932772.1 (hypothetical protein HYC85_028943 [Camellia sinensis])

HSP 1 Score: 125.9 bits (315), Expect = 1.3e-25
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1   MGLLVTGTKYRGEFEERLKKLMEEIKKSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 60
           MGLLV GTKYRGEFEERLKKLMEEIK+SDEIILFIDEVHTLIGAGAAEGAIDAANILKPA
Sbjct: 374 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 433

Query: 61  LARGELQ 68
           LARGELQ
Sbjct: 434 LARGELQ 440

[Close]

BLAST of MELO3C034656 vs. NCBI nr
Match: XP_009337515.1 (PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic-like [Pyrus x bretschneideri] >XP_009337516.1 PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic-like [Pyrus x bretschneideri])

HSP 1 Score: 125.9 bits (315), Expect = 1.3e-25
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1   MGLLVTGTKYRGEFEERLKKLMEEIKKSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 60
           MGLLV GTKYRGEFEERLKKLMEEIK+SDEIILFIDEVHTLIGAGAAEGAIDAANILKPA
Sbjct: 335 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 394

Query: 61  LARGELQ 68
           LARGELQ
Sbjct: 395 LARGELQ 401

[Close]

BLAST of MELO3C034656 vs. ExPASy Swiss-Prot
Match: P31541 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CD4A PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.7e-28
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1   MGLLVTGTKYRGEFEERLKKLMEEIKKSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 60
           MGLLV GTKYRGEFEERLKKLMEEIK+SDEIILFIDEVHTLIGAGAAEGAIDAANILKPA
Sbjct: 338 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 397

Query: 61  LARGELQ 68
           LARGELQ
Sbjct: 398 LARGELQ 404

[Close]

BLAST of MELO3C034656 vs. ExPASy Swiss-Prot
Match: P31542 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CD4B PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.7e-28
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1   MGLLVTGTKYRGEFEERLKKLMEEIKKSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 60
           MGLLV GTKYRGEFEERLKKLMEEIK+SDEIILFIDEVHTLIGAGAAEGAIDAANILKPA
Sbjct: 336 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 395

Query: 61  LARGELQ 68
           LARGELQ
Sbjct: 396 LARGELQ 402

[Close]

BLAST of MELO3C034656 vs. ExPASy Swiss-Prot
Match: Q2QVG9 (Chaperone protein ClpC2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CLPC2 PE=2 SV=2)

HSP 1 Score: 125.9 bits (315), Expect = 1.7e-28
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1   MGLLVTGTKYRGEFEERLKKLMEEIKKSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 60
           MGLLV GTKYRGEFEERLKKLMEEIK+SDEIILFIDEVHTLIGAGAAEGAIDAANILKPA
Sbjct: 333 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 392

Query: 61  LARGELQ 68
           LARGELQ
Sbjct: 393 LARGELQ 399

[Close]

BLAST of MELO3C034656 vs. ExPASy Swiss-Prot
Match: Q9FI56 (Chaperone protein ClpC1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPC1 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 3.7e-28
Identity = 64/67 (95.52%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1   MGLLVTGTKYRGEFEERLKKLMEEIKKSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 60
           MGLLV GTKYRGEFEERLKKLMEEI++SDEIILFIDEVHTLIGAGAAEGAIDAANILKPA
Sbjct: 338 MGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 397

Query: 61  LARGELQ 68
           LARGELQ
Sbjct: 398 LARGELQ 404

[Close]

BLAST of MELO3C034656 vs. ExPASy Swiss-Prot
Match: Q9SXJ7 (Chaperone protein ClpC2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPC2 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 3.7e-28
Identity = 64/67 (95.52%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1   MGLLVTGTKYRGEFEERLKKLMEEIKKSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 60
           MGLLV GTKYRGEFEERLKKLMEEI++SDEIILFIDEVHTLIGAGAAEGAIDAANILKPA
Sbjct: 359 MGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 418

Query: 61  LARGELQ 68
           LARGELQ
Sbjct: 419 LARGELQ 425

[Close]

BLAST of MELO3C034656 vs. ExPASy TrEMBL
Match: A0A5A7VH27 (Chaperone protein ClpC OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00470 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 5.6e-27
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MGLLVTGTKYRGEFEERLKKLMEEIKKSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 60
          MGLLVTGTKYRGEFEERLKKLMEEIKKSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA
Sbjct: 28 MGLLVTGTKYRGEFEERLKKLMEEIKKSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 87

Query: 61 LARGELQ 68
          LARGELQ
Sbjct: 88 LARGELQ 94

[Close]

BLAST of MELO3C034656 vs. ExPASy TrEMBL
Match: A0A1B6PCG3 (Uncharacterized protein OS=Sorghum bicolor OX=4558 GN=SORBI_3008G081900 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.2e-26
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1   MGLLVTGTKYRGEFEERLKKLMEEIKKSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 60
           MGLLV GTKYRGEFEERLKKLMEEIK+SDEIILFIDEVHTLIGAGAAEGAIDAANILKPA
Sbjct: 335 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 394

Query: 61  LARGELQ 68
           LARGELQ
Sbjct: 395 LARGELQ 401

[Close]

BLAST of MELO3C034656 vs. ExPASy TrEMBL
Match: K3Z3M1 (Uncharacterized protein OS=Setaria italica OX=4555 GN=101758343 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.2e-26
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1   MGLLVTGTKYRGEFEERLKKLMEEIKKSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 60
           MGLLV GTKYRGEFEERLKKLMEEIK+SDEIILFIDEVHTLIGAGAAEGAIDAANILKPA
Sbjct: 335 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 394

Query: 61  LARGELQ 68
           LARGELQ
Sbjct: 395 LARGELQ 401

[Close]

BLAST of MELO3C034656 vs. ExPASy TrEMBL
Match: A0A1S3VVE4 (chaperone protein ClpC, chloroplastic OS=Vigna radiata var. radiata OX=3916 GN=LOC106778859 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.2e-26
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1   MGLLVTGTKYRGEFEERLKKLMEEIKKSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 60
           MGLLV GTKYRGEFEERLKKLMEEIK+SDEIILFIDEVHTLIGAGAAEGAIDAANILKPA
Sbjct: 336 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 395

Query: 61  LARGELQ 68
           LARGELQ
Sbjct: 396 LARGELQ 402

[Close]

BLAST of MELO3C034656 vs. ExPASy TrEMBL
Match: M5WCY0 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G143300 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.2e-26
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1   MGLLVTGTKYRGEFEERLKKLMEEIKKSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 60
           MGLLV GTKYRGEFEERLKKLMEEIK+SDEIILFIDEVHTLIGAGAAEGAIDAANILKPA
Sbjct: 335 MGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 394

Query: 61  LARGELQ 68
           LARGELQ
Sbjct: 395 LARGELQ 401

[Close]

BLAST of MELO3C034656 vs. TAIR 10
Match: AT3G48870.1 (Clp ATPase )

HSP 1 Score: 124.8 bits (312), Expect = 2.6e-29
Identity = 64/67 (95.52%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1   MGLLVTGTKYRGEFEERLKKLMEEIKKSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 60
           MGLLV GTKYRGEFEERLKKLMEEI++SDEIILFIDEVHTLIGAGAAEGAIDAANILKPA
Sbjct: 359 MGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 418

Query: 61  LARGELQ 68
           LARGELQ
Sbjct: 419 LARGELQ 425

[Close]

BLAST of MELO3C034656 vs. TAIR 10
Match: AT3G48870.2 (Clp ATPase )

HSP 1 Score: 124.8 bits (312), Expect = 2.6e-29
Identity = 64/67 (95.52%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1   MGLLVTGTKYRGEFEERLKKLMEEIKKSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 60
           MGLLV GTKYRGEFEERLKKLMEEI++SDEIILFIDEVHTLIGAGAAEGAIDAANILKPA
Sbjct: 328 MGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 387

Query: 61  LARGELQ 68
           LARGELQ
Sbjct: 388 LARGELQ 394

[Close]

BLAST of MELO3C034656 vs. TAIR 10
Match: AT5G50920.1 (CLPC homologue 1 )

HSP 1 Score: 124.8 bits (312), Expect = 2.6e-29
Identity = 64/67 (95.52%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1   MGLLVTGTKYRGEFEERLKKLMEEIKKSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 60
           MGLLV GTKYRGEFEERLKKLMEEI++SDEIILFIDEVHTLIGAGAAEGAIDAANILKPA
Sbjct: 338 MGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA 397

Query: 61  LARGELQ 68
           LARGELQ
Sbjct: 398 LARGELQ 404

[Close]

BLAST of MELO3C034656 vs. TAIR 10
Match: AT5G15450.1 (casein lytic proteinase B3 )

HSP 1 Score: 89.7 bits (221), Expect = 9.4e-19
Identity = 42/68 (61.76%), Postives = 56/68 (82.35%), Query Frame = 0


Query: 1   MGLLVTGTKYRGEFEERLKKLMEEIKKSD-EIILFIDEVHTLIGAGAAEGAIDAANILKP 60
           MG L+ G KYRGEFE+RLK +++E+  S+ +IILFIDE+HT++GAGA  GA+DA N+LKP
Sbjct: 318 MGALIAGAKYRGEFEDRLKAVLKEVTDSEGQIILFIDEIHTVVGAGATNGAMDAGNLLKP 377

Query: 61  ALARGELQ 68
            L RGEL+
Sbjct: 378 MLGRGELR 385

[Close]

BLAST of MELO3C034656 vs. TAIR 10
Match: AT1G74310.1 (heat shock protein 101 )

HSP 1 Score: 87.0 bits (214), Expect = 6.1e-18
Identity = 40/68 (58.82%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 1   MGLLVTGTKYRGEFEERLKKLMEEIKKSD-EIILFIDEVHTLIGAGAAEGAIDAANILKP 60
           MG LV G KYRGEFEERLK +++E++ ++ ++ILFIDE+H ++GAG  EG++DAAN+ KP
Sbjct: 243 MGALVAGAKYRGEFEERLKSVLKEVEDAEGKVILFIDEIHLVLGAGKTEGSMDAANLFKP 302

Query: 61  ALARGELQ 68
            LARG+L+
Sbjct: 303 MLARGQLR 310

The following BLAST results are available for this feature:

BLAST of MELO3C034656 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0066397.1	1.1e-26	100.00	chaperone protein ClpC [Cucumis melo var. makuwa] >TYK00888.1 chaperone protein ...	[more]
KAF5807089.1	1.3e-25	97.01	putative ClpA/B family, UVR domain, AAA+ ATPase domain, Clp ATPase [Helianthus a...	[more]
VAI29239.1	1.3e-25	97.01	unnamed protein product [Triticum turgidum subsp. durum]	[more]
KAF5932772.1	1.3e-25	97.01	hypothetical protein HYC85_028943 [Camellia sinensis]	[more]
XP_009337515.1	1.3e-25	97.01	PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chl...	[more]

BLAST of MELO3C034656 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P31541	1.7e-28	97.01	ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic ...	[more]
P31542	1.7e-28	97.01	ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic ...	[more]
Q2QVG9	1.7e-28	97.01	Chaperone protein ClpC2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9FI56	3.7e-28	95.52	Chaperone protein ClpC1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPC1 ...	[more]
Q9SXJ7	3.7e-28	95.52	Chaperone protein ClpC2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPC2 ...	[more]

BLAST of MELO3C034656 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VH27	5.6e-27	100.00	Chaperone protein ClpC OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold6...	[more]
A0A1B6PCG3	6.2e-26	97.01	Uncharacterized protein OS=Sorghum bicolor OX=4558 GN=SORBI_3008G081900 PE=3 SV=...	[more]
K3Z3M1	6.2e-26	97.01	Uncharacterized protein OS=Setaria italica OX=4555 GN=101758343 PE=3 SV=1	[more]
A0A1S3VVE4	6.2e-26	97.01	chaperone protein ClpC, chloroplastic OS=Vigna radiata var. radiata OX=3916 GN=L...	[more]
M5WCY0	6.2e-26	97.01	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G143300 PE=3 SV=1	[more]

BLAST of MELO3C034656 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48870.1	2.6e-29	95.52	Clp ATPase	[more]
AT3G48870.2	2.6e-29	95.52	Clp ATPase	[more]
AT5G50920.1	2.6e-29	95.52	CLPC homologue 1	[more]
AT5G15450.1	9.4e-19	61.76	casein lytic proteinase B3	[more]
AT1G74310.1	6.1e-18	58.82	heat shock protein 101	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 11..31
None	No IPR available	PANTHER	PTHR11638:SF169	ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPA HOMOLOG CD4B, CHLOROPLASTIC	coord: 1..67
None	No IPR available	PANTHER	PTHR11638	ATP-DEPENDENT CLP PROTEASE	coord: 1..67
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 8..62 e-value: 3.5E-7 score: 30.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..67 e-value: 2.8E-24 score: 87.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 4..65
IPR018368	ClpA/B, conserved site 1	PROSITE	PS00870	CLPAB_1	coord: 52..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034656.1	MELO3C034656.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity