MELO3C034641 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034641
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	TSA1-like protein
Location	chr04: 12319323 .. 12319510 (-)
RNA-Seq Expression	MELO3C034641
Synteny	MELO3C034641

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAAGGAGATTGAGAGCAAGAACAAAGAATATGAGTTGGTCCAAAGTAAATACGAGTTTCCGAGTCGTGACAATCTTACTCATGATTCCTTGGTCGACCAAGACAAGATTGAGGTTGATCTTAAAGGATTTGGGAAGTGGAAGGAAACAATCAAGTCGAAGAATATGAGGAGTGAGATTCAATA

mRNA sequence

ATGAGGAAGGAGATTGAGAGCAAGAACAAAGAATATGAGTTGGTCCAAAGTAAATACGAGTTTCCGAGTCGTGACAATCTTACTCATGATTCCTTGGTCGACCAAGACAAGATTGAGGTTGATCTTAAAGGATTTGGGAAGTGGAAGGAAACAATCAAGTCGAAGAATATGAGGAGTGAGATTCAATA

Coding sequence (CDS)

ATGAGGAAGGAGATTGAGAGCAAGAACAAAGAATATGAGTTGGTCCAAAGTAAATACGAGTTTCCGAGTCGTGACAATCTTACTCATGATTCCTTGGTCGACCAAGACAAGATTGAGGTTGATCTTAAAGGATTTGGGAAGTGGAAGGAAACAATCAAGTCGAAGAATATGAGGAGTGAGATTCAA

Protein sequence

MRKEIESKNKEYELVQSKYEFPSRDNLTHDSLVDQDKIEVDLKGFGKWKETIKSKNMRSEIQ

Homology

[Close]

BLAST of MELO3C034641 vs. NCBI nr
Match: TYJ98037.1 (TSA1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 124.8 bits (312), Expect = 2.6e-25
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MRKEIESKNKEYELVQSKYEFPSRDNLTHDSLVDQDKIEVDLKGFGKWKETIKSKNMRSE 60
          MRKEIESKNKEYELVQSKYEFPSRDNLTHDSLVDQDKIEVDLKGFGKWKETIKSKNMRSE
Sbjct: 13 MRKEIESKNKEYELVQSKYEFPSRDNLTHDSLVDQDKIEVDLKGFGKWKETIKSKNMRSE 72

Query: 61 IQ 63
          IQ
Sbjct: 73 IQ 74

[Close]

BLAST of MELO3C034641 vs. NCBI nr
Match: KAA0048522.1 (TSA1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 92.0 bits (227), Expect = 1.9e-15
Identity = 47/60 (78.33%), Postives = 53/60 (88.33%), Query Frame = 0


Query: 1  MRKEIESKNKEYELVQSKYEFPSRDNLTHDSLVDQDKIEVDLKGFGKWKETI-KSKNMRS 60
          MRKEIESKNKEYE++QSKYEF   DNLTHDS+VDQDKIEVD KGFGKWK+TI +SK M +
Sbjct: 1  MRKEIESKNKEYEILQSKYEFLRLDNLTHDSMVDQDKIEVDPKGFGKWKKTIEESKEMEN 60

[Close]

BLAST of MELO3C034641 vs. NCBI nr
Match: TYK28313.1 (TSA1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 92.0 bits (227), Expect = 1.9e-15
Identity = 47/60 (78.33%), Postives = 53/60 (88.33%), Query Frame = 0


Query: 1  MRKEIESKNKEYELVQSKYEFPSRDNLTHDSLVDQDKIEVDLKGFGKWKETI-KSKNMRS 60
          MRKEIESKNKEYE++QSKYEF   DNLTHDS+VDQDKIEVD KGFGKWK+TI +SK M +
Sbjct: 1  MRKEIESKNKEYEILQSKYEFLRLDNLTHDSMVDQDKIEVDPKGFGKWKKTIEESKEMEN 60

[Close]

BLAST of MELO3C034641 vs. NCBI nr
Match: XP_031739615.1 (TSA1-like protein [Cucumis sativus])

HSP 1 Score: 91.3 bits (225), Expect = 3.2e-15
Identity = 47/63 (74.60%), Postives = 52/63 (82.54%), Query Frame = 0


Query: 1   MRKEIESKNKEYELVQSKYEFPSRDNLTHDSLVDQDKIEVDLKGFGKWKETIKS-KNMRS 60
           MRKEIESKNKEYEL+QSKYEF   DNLTH S+V+QDK+EVD KGFGKWKE  +  K M S
Sbjct: 58  MRKEIESKNKEYELLQSKYEFLRLDNLTHKSMVEQDKVEVDPKGFGKWKERFEELKEMES 117

Query: 61  EIQ 63
           EIQ
Sbjct: 118 EIQ 120

[Close]

BLAST of MELO3C034641 vs. NCBI nr
Match: KAE8649201.1 (hypothetical protein Csa_014777 [Cucumis sativus])

HSP 1 Score: 91.3 bits (225), Expect = 3.2e-15
Identity = 47/63 (74.60%), Postives = 52/63 (82.54%), Query Frame = 0


Query: 1   MRKEIESKNKEYELVQSKYEFPSRDNLTHDSLVDQDKIEVDLKGFGKWKETIKS-KNMRS 60
           MRKEIESKNKEYEL+QSKYEF   DNLTH S+V+QDK+EVD KGFGKWKE  +  K M S
Sbjct: 58  MRKEIESKNKEYELLQSKYEFLRLDNLTHKSMVEQDKVEVDPKGFGKWKERFEELKEMES 117

Query: 61  EIQ 63
           EIQ
Sbjct: 118 EIQ 120

[Close]

BLAST of MELO3C034641 vs. ExPASy TrEMBL
Match: A0A5D3BFY9 (TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold487G00700 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-25
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MRKEIESKNKEYELVQSKYEFPSRDNLTHDSLVDQDKIEVDLKGFGKWKETIKSKNMRSE 60
          MRKEIESKNKEYELVQSKYEFPSRDNLTHDSLVDQDKIEVDLKGFGKWKETIKSKNMRSE
Sbjct: 13 MRKEIESKNKEYELVQSKYEFPSRDNLTHDSLVDQDKIEVDLKGFGKWKETIKSKNMRSE 72

Query: 61 IQ 63
          IQ
Sbjct: 73 IQ 74

[Close]

BLAST of MELO3C034641 vs. ExPASy TrEMBL
Match: A0A5D3DX93 (TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001380 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 9.1e-16
Identity = 47/60 (78.33%), Postives = 53/60 (88.33%), Query Frame = 0


Query: 1  MRKEIESKNKEYELVQSKYEFPSRDNLTHDSLVDQDKIEVDLKGFGKWKETI-KSKNMRS 60
          MRKEIESKNKEYE++QSKYEF   DNLTHDS+VDQDKIEVD KGFGKWK+TI +SK M +
Sbjct: 1  MRKEIESKNKEYEILQSKYEFLRLDNLTHDSMVDQDKIEVDPKGFGKWKKTIEESKEMEN 60

[Close]

BLAST of MELO3C034641 vs. ExPASy TrEMBL
Match: A0A5A7TYB0 (TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G001430 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 9.1e-16
Identity = 47/60 (78.33%), Postives = 53/60 (88.33%), Query Frame = 0


Query: 1  MRKEIESKNKEYELVQSKYEFPSRDNLTHDSLVDQDKIEVDLKGFGKWKETI-KSKNMRS 60
          MRKEIESKNKEYE++QSKYEF   DNLTHDS+VDQDKIEVD KGFGKWK+TI +SK M +
Sbjct: 1  MRKEIESKNKEYEILQSKYEFLRLDNLTHDSMVDQDKIEVDPKGFGKWKKTIEESKEMEN 60

[Close]

BLAST of MELO3C034641 vs. ExPASy TrEMBL
Match: A0A0A0KYB9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G051390 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.6e-15
Identity = 47/63 (74.60%), Postives = 52/63 (82.54%), Query Frame = 0


Query: 1   MRKEIESKNKEYELVQSKYEFPSRDNLTHDSLVDQDKIEVDLKGFGKWKETIKS-KNMRS 60
           MRKEIESKNKEYEL+QSKYEF   DNLTH S+V+QDK+EVD KGFGKWKE  +  K M S
Sbjct: 52  MRKEIESKNKEYELLQSKYEFLRLDNLTHKSMVEQDKVEVDPKGFGKWKERFEELKEMES 111

Query: 61  EIQ 63
           EIQ
Sbjct: 112 EIQ 114

[Close]

BLAST of MELO3C034641 vs. ExPASy TrEMBL
Match: A0A5A7TUZ5 (TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00230 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.5e-15
Identity = 48/63 (76.19%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 1  MRKEIESKNKEYELVQSKYEFPSRDNLTHDSLVDQDKIEVDLKGFGKWKETI-KSKNMRS 60
          MRKEIESKNKEYEL+QSKYEF   D+LTHDS+VD+DKIEVD KGFGK KE I +S+ M S
Sbjct: 1  MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVDRKGFGKRKEPIEESRKMES 60

Query: 61 EIQ 63
          EIQ
Sbjct: 61 EIQ 63

The following BLAST results are available for this feature:

BLAST of MELO3C034641 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98037.1	2.6e-25	100.00	TSA1-like protein [Cucumis melo var. makuwa]	[more]
KAA0048522.1	1.9e-15	78.33	TSA1-like protein [Cucumis melo var. makuwa]	[more]
TYK28313.1	1.9e-15	78.33	TSA1-like protein [Cucumis melo var. makuwa]	[more]
XP_031739615.1	3.2e-15	74.60	TSA1-like protein [Cucumis sativus]	[more]
KAE8649201.1	3.2e-15	74.60	hypothetical protein Csa_014777 [Cucumis sativus]	[more]

BLAST of MELO3C034641 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C034641 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BFY9	1.3e-25	100.00	TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold487G00...	[more]
A0A5D3DX93	9.1e-16	78.33	TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00...	[more]
A0A5A7TYB0	9.1e-16	78.33	TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G001...	[more]
A0A0A0KYB9	1.6e-15	74.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G051390 PE=4 SV=1	[more]
A0A5A7TUZ5	4.5e-15	76.19	TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00...	[more]

BLAST of MELO3C034641 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034641.1	MELO3C034641.1	mRNA