MELO3C034632 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034632
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr06: 20384519 .. 20384754 (+)
RNA-Seq Expression	MELO3C034632
Synteny	MELO3C034632

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGATTGGGCGAACGTTGAAGTGTGGGCGGAGGCGAAATAGTTGGCCGACGTTGAACCGTCAGCGGATAACACACGGTCAACGGAAGACGGACGATCGGCGGAAGTTCGTTCGACCGCGGGCAGAAGAGAAATCGAATGTGGGCGACGGTAAATTGAGGCGGAAGAATATTGGAAGAATATTGGAAGGGGTTGAGAACTCACTGGTTGTTGGAAGAATATTGGGCAGGAAAATAA

mRNA sequence

GAAGATTGGGCGAACGTTGAAGTGTGGGCGGAGGCGAAATAGTTGGCCGACGTTGAACCGTCAGCGGATAACACACGGTCAACGGAAGACGGACGATCGGCGGAAGTTCGTTCGACCGCGGGCAGAAGAGAAATCGAATGTGGGCGACGGTAAATTGAGGTGGAAGGGGTTGAGAACTCACTGGTTGTTGGAAGAATATTGGGCAGGAAAATAA

Coding sequence (CDS)

AAGATTGGGCGAACGTTGAAGTGTGGGCGGAGGCGAAATAGTTGGCCGACGTTGAACCGTCAGCGGATAACACACGGTCAACGGAAGACGGACGATCGGCGGAAGTTCGTTCGACCGCGGGCAGAAGAGAAATCGAATGTGGGCGACGGTAAATTGAGGTGGAAGGGGTTGAGAACTCACTGGTTGTTGGAAGAATATTGGGCAGGAAAATAA

Protein sequence

KIGRTLKCGRRRNSWPTLNRQRITHGQRKTDDRRKFVRPRAEEKSNVGDGKLRWKGLRTHWLLEEYWAGK

Homology

[Close]

BLAST of MELO3C034632 vs. NCBI nr
Match: TYK06520.1 (hypothetical protein E5676_scaffold70G00550 [Cucumis melo var. makuwa])

HSP 1 Score: 83.2 bits (204), Expect = 9.9e-13
Identity = 41/50 (82.00%), Postives = 44/50 (88.00%), Query Frame = 0


Query: 9  GRRRNSWPTLNRQRITHGQRKTDDRRKFVRPRAEEKSNVGDGKLRWKGLR 59
          GRRRNSWPTLNR+R THG+RKTDDRRKFVR RAEEKSNVGDGK   K +R
Sbjct: 7  GRRRNSWPTLNRRRKTHGERKTDDRRKFVRSRAEEKSNVGDGKSGRKNIR 56

[Close]

BLAST of MELO3C034632 vs. NCBI nr
Match: KAA0034864.1 (hypothetical protein E6C27_scaffold515G00300 [Cucumis melo var. makuwa])

HSP 1 Score: 75.9 bits (185), Expect = 1.6e-10
Identity = 38/53 (71.70%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 9  GRRRNSWPTLNRQRITHGQRKTDDRRKFVRPRAEEKSNVGDGKLRWKGLRTHW 62
          GRRRNSWPTLNR+R THGQ+KTD RRK V+P+AEEKSNVGDGK    G   +W
Sbjct: 3  GRRRNSWPTLNRRRKTHGQQKTDGRRKSVQPQAEEKSNVGDGK---SGQTANW 52

[Close]

BLAST of MELO3C034632 vs. NCBI nr
Match: KAA0036897.1 (hypothetical protein E6C27_scaffold1480G00210 [Cucumis melo var. makuwa] >KAA0064938.1 hypothetical protein E6C27_scaffold82G002560 [Cucumis melo var. makuwa] >KAA0066623.1 hypothetical protein E6C27_scaffold979G00400 [Cucumis melo var. makuwa])

HSP 1 Score: 75.5 bits (184), Expect = 2.1e-10
Identity = 38/53 (71.70%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 9  GRRRNSWPTLNRQRITHGQRKTDDRRKFVRPRAEEKSNVGDGKLRWKGLRTHW 62
          GRRRNSWPTLNR+R THGQ+KTD RRK V+P+AEEKSNV DGK    G  T+W
Sbjct: 3  GRRRNSWPTLNRRRKTHGQQKTDGRRKSVQPQAEEKSNVSDGK---SGQTTNW 52

[Close]

BLAST of MELO3C034632 vs. NCBI nr
Match: TYK14189.1 (hypothetical protein E5676_scaffold5G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 72.8 bits (177), Expect = 1.3e-09
Identity = 37/53 (69.81%), Postives = 42/53 (79.25%), Query Frame = 0


Query: 9  GRRRNSWPTLNRQRITHGQRKTDDRRKFVRPRAEEKSNVGDGKLRWKGLRTHW 62
          GRRRNSWPTLNR+R TH Q+KTD RRK V+P+AEEKSNV DGK    G  T+W
Sbjct: 3  GRRRNSWPTLNRRRKTHDQQKTDGRRKSVQPQAEEKSNVSDGK---SGQTTNW 52

[Close]

BLAST of MELO3C034632 vs. ExPASy TrEMBL
Match: A0A5D3C5A5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold70G00550 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.8e-13
Identity = 41/50 (82.00%), Postives = 44/50 (88.00%), Query Frame = 0


Query: 9  GRRRNSWPTLNRQRITHGQRKTDDRRKFVRPRAEEKSNVGDGKLRWKGLR 59
          GRRRNSWPTLNR+R THG+RKTDDRRKFVR RAEEKSNVGDGK   K +R
Sbjct: 7  GRRRNSWPTLNRRRKTHGERKTDDRRKFVRSRAEEKSNVGDGKSGRKNIR 56

[Close]

BLAST of MELO3C034632 vs. ExPASy TrEMBL
Match: A0A5A7SUD8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold515G00300 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 7.6e-11
Identity = 38/53 (71.70%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 9  GRRRNSWPTLNRQRITHGQRKTDDRRKFVRPRAEEKSNVGDGKLRWKGLRTHW 62
          GRRRNSWPTLNR+R THGQ+KTD RRK V+P+AEEKSNVGDGK    G   +W
Sbjct: 3  GRRRNSWPTLNRRRKTHGQQKTDGRRKSVQPQAEEKSNVGDGK---SGQTANW 52

[Close]

BLAST of MELO3C034632 vs. ExPASy TrEMBL
Match: A0A5A7VBF1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1480G00210 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.0e-10
Identity = 38/53 (71.70%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 9  GRRRNSWPTLNRQRITHGQRKTDDRRKFVRPRAEEKSNVGDGKLRWKGLRTHW 62
          GRRRNSWPTLNR+R THGQ+KTD RRK V+P+AEEKSNV DGK    G  T+W
Sbjct: 3  GRRRNSWPTLNRRRKTHGQQKTDGRRKSVQPQAEEKSNVSDGK---SGQTTNW 52

[Close]

BLAST of MELO3C034632 vs. ExPASy TrEMBL
Match: A0A5D3CVA7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00050 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.5e-10
Identity = 37/53 (69.81%), Postives = 42/53 (79.25%), Query Frame = 0


Query: 9  GRRRNSWPTLNRQRITHGQRKTDDRRKFVRPRAEEKSNVGDGKLRWKGLRTHW 62
          GRRRNSWPTLNR+R TH Q+KTD RRK V+P+AEEKSNV DGK    G  T+W
Sbjct: 3  GRRRNSWPTLNRRRKTHDQQKTDGRRKSVQPQAEEKSNVSDGK---SGQTTNW 52

The following BLAST results are available for this feature:

BLAST of MELO3C034632 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK06520.1	9.9e-13	82.00	hypothetical protein E5676_scaffold70G00550 [Cucumis melo var. makuwa]	[more]
KAA0034864.1	1.6e-10	71.70	hypothetical protein E6C27_scaffold515G00300 [Cucumis melo var. makuwa]	[more]
KAA0036897.1	2.1e-10	71.70	hypothetical protein E6C27_scaffold1480G00210 [Cucumis melo var. makuwa] >KAA006...	[more]
TYK14189.1	1.3e-09	69.81	hypothetical protein E5676_scaffold5G00050 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C034632 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C034632 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C5A5	4.8e-13	82.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SUD8	7.6e-11	71.70	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7VBF1	1.0e-10	71.70	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CVA7	6.5e-10	69.81	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C034632 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..44

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034632.1	MELO3C034632.1	mRNA