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MELO3C034623 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACTCCATGTATTTTTTCTAATTTCTCATTCTCAGTATGTCAACCTCAAATCGTGCCCCGAGACATGTTTGGACGAAGGAGGAGGAGGGAACTCTTGTGGAATGTTTAATGGAGCTAGTGTCAATGGGGGGATGGAAATCAGATAATGGTACGTTCCGCCCAGGATACCTTGCGCAGTTGGTACGCATGATGGCGGAGAAACTACCTGGATGTCAGGTACGAGCAACAACTGTAATTGATTGTAGGATCAAGACACTGAAGCAAACGTTCTAGGCCATTGCCGAAATGCGGGGCTCAGCATGCAGTGGCTTTGGGTGGAATGATGAAGAGAAATGTATCGTTGCGGAGAATGAATTATTTGATAATTGGGTTAGGGTATGGAATATAATTTAAACGTGACACAACGTTCACAATGTACATTTAGTTAACAATTTTTCAATTAGTACTCATACGTGATTTTTTTTGTGCCCGCAGTCGCATCCTGCAGCGAAGGGACTCCTGAACAAACCATTCCCGTATTACGACGAACTTACATATGTATTCGGTCGCGATAGGGCGACCAGTCGGTTCGCTGAGACATTCGCGGACGTGGGGTCTAACGAGCCTGGTGGCAGATATGATAGATTTGATATGGGGGATGGAAACGAGGACTTCCTGCCCGTGTACAGCCAGGGAATTGACCTCTCGCAGGACGATGTACATGCATCCCGACCTTCTCGCGCTTCAGAGGGTAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGAGCTTGAAGCGATACATCTGGCGCTCGACCAAATAAACGAGCAACTCAGGCAGATTGCGGAATGGCCAGCACGCAACCTTGCAAATGACAACCACGTGCGCACGGAATTTTTCCGCATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGGGTGTTATTGAAAAGGCATCTTTTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGCCTGAGGATGAGAGGGAGGGATTCTGTAGAGTCCTCCTACGAGACATAGAGAGA ACTCCATGTATTTTTTCTAATTTCTCATTCTCAGTATGTCAACCTCAAATCGTGCCCCGAGACATGTTTGGACGAAGGAGGAGGAGGGAACTCTTGTGGAATGTTTAATGGAGCTAGTGTCAATGGGGGGATGGAAATCAGATAATGGTACGTTCCGCCCAGGATACCTTGCGCAGTTGGTACGCATGATGGCGGAGAAACTACCTGGATGTCAGGTACGAGCAACAACTGTAATTGATTGTAGGATCAAGACACTGAAGCAAACGTTCTAGGCCATTGCCGAAATGCGGGGCTCAGCATGCAGTGGCTTTGGGTGGAATGATGAAGAGAAATGTATCGTTGCGGAGAATGAATTATTTGATAATTGGGTTAGGTCGCATCCTGCAGCGAAGGGACTCCTGAACAAACCATTCCCGTATTACGACGAACTTACATATGTATTCGGTCGCGATAGGGCGACCAGTCGGTTCGCTGAGACATTCGCGGACGTGGGGTCTAACGAGCCTGGTGGCAGATATGATAGATTTGATATGGGGGATGGAAACGAGGACTTCCTGCCCGTGTACAGCCAGGGAATTGACCTCTCGCAGGACGATGTACATGCATCCCGACCTTCTCGCGCTTCAGAGGGTAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGAGCTTGAAGCGATACATCTGGCGCTCGACCAAATAAACGAGCAACTCAGGCAGATTGCGGAATGGCCAGCACGCAACCTTGCAAATGACAACCACGTGCGCACGGAATTTTTCCGCATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGGGTGTTATTGAAAAGGCATCTTTTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGCCTGAGGATGAGAGGGAGGGATTCTGTAGAGTCCTCCTACGAGACATAGAGAGA ATGCGGGGCTCAGCATGCAGTGGCTTTGGGTGGAATGATGAAGAGAAATGTATCGTTGCGGAGAATGAATTATTTGATAATTGGGTTAGGTCGCATCCTGCAGCGAAGGGACTCCTGAACAAACCATTCCCGTATTACGACGAACTTACATATGTATTCGGTCGCGATAGGGCGACCAGTCGGTTCGCTGAGACATTCGCGGACGTGGGGTCTAACGAGCCTGGTGGCAGATATGATAGATTTGATATGGGGGATGGAAACGAGGACTTCCTGCCCGTGTACAGCCAGGGAATTGACCTCTCGCAGGACGATGTACATGCATCCCGACCTTCTCGCGCTTCAGAGGGTAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGAGCTTGAAGCGATACATCTGGCGCTCGACCAAATAAACGAGCAACTCAGGCAGATTGCGGAATGGCCAGCACGCAACCTTGCAAATGACAACCACGTGCGCACGGAATTTTTCCGCATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGGGTGTTATTGAAAAGGCATCTTTTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGCCTGAGGATGAGAGGGAGGGATTCTGTAGAGTCCTCCTACGAGACATAGAGAGA MRGSACSGFGWNDEEKCIVAENELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATSRFAETFADVGSNEPGGRYDRFDMGDGNEDFLPVYSQGIDLSQDDVHASRPSRASEGRTGSSGSKRKRGSQRDFELEAIHLALDQINEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRVLLKRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER Homology
BLAST of MELO3C034623 vs. NCBI nr
Match: TYK10915.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK15088.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 435.6 bits (1119), Expect = 2.5e-118 Identity = 212/223 (95.07%), Postives = 215/223 (96.41%), Query Frame = 0
BLAST of MELO3C034623 vs. NCBI nr
Match: KAA0032766.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 435.6 bits (1119), Expect = 2.5e-118 Identity = 212/223 (95.07%), Postives = 215/223 (96.41%), Query Frame = 0
BLAST of MELO3C034623 vs. NCBI nr
Match: TYK21395.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK24245.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 435.6 bits (1119), Expect = 2.5e-118 Identity = 212/223 (95.07%), Postives = 215/223 (96.41%), Query Frame = 0
BLAST of MELO3C034623 vs. NCBI nr
Match: KAA0038975.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 434.5 bits (1116), Expect = 5.6e-118 Identity = 211/223 (94.62%), Postives = 215/223 (96.41%), Query Frame = 0
BLAST of MELO3C034623 vs. NCBI nr
Match: KAA0033744.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0044866.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0046274.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0049705.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0057135.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 434.5 bits (1116), Expect = 5.6e-118 Identity = 211/223 (94.62%), Postives = 215/223 (96.41%), Query Frame = 0
BLAST of MELO3C034623 vs. ExPASy TrEMBL
Match: A0A5D3DCZ1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00020 PE=4 SV=1) HSP 1 Score: 435.6 bits (1119), Expect = 1.2e-118 Identity = 212/223 (95.07%), Postives = 215/223 (96.41%), Query Frame = 0
BLAST of MELO3C034623 vs. ExPASy TrEMBL
Match: A0A5D3CHA0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00970 PE=4 SV=1) HSP 1 Score: 435.6 bits (1119), Expect = 1.2e-118 Identity = 212/223 (95.07%), Postives = 215/223 (96.41%), Query Frame = 0
BLAST of MELO3C034623 vs. ExPASy TrEMBL
Match: A0A5A7SRU1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold708G00100 PE=4 SV=1) HSP 1 Score: 435.6 bits (1119), Expect = 1.2e-118 Identity = 212/223 (95.07%), Postives = 215/223 (96.41%), Query Frame = 0
BLAST of MELO3C034623 vs. ExPASy TrEMBL
Match: A0A5A7TRV1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold153G00290 PE=4 SV=1) HSP 1 Score: 434.5 bits (1116), Expect = 2.7e-118 Identity = 211/223 (94.62%), Postives = 215/223 (96.41%), Query Frame = 0
BLAST of MELO3C034623 vs. ExPASy TrEMBL
Match: A0A5A7TC56 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00560 PE=4 SV=1) HSP 1 Score: 434.5 bits (1116), Expect = 2.7e-118 Identity = 211/223 (94.62%), Postives = 215/223 (96.41%), Query Frame = 0
BLAST of MELO3C034623 vs. TAIR 10
Match: AT5G27260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 49.3 bits (116), Expect = 4.7e-06 Identity = 22/62 (35.48%), Postives = 35/62 (56.45%), Query Frame = 0
BLAST of MELO3C034623 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 48.5 bits (114), Expect = 8.0e-06 Identity = 14/56 (25.00%), Postives = 35/56 (62.50%), Query Frame = 0
BLAST of MELO3C034623 vs. TAIR 10
Match: AT1G30140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27260.1); Has 313 Blast hits to 256 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 295; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 48.1 bits (113), Expect = 1.0e-05 Identity = 20/62 (32.26%), Postives = 37/62 (59.68%), Query Frame = 0
BLAST of MELO3C034623 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). ) HSP 1 Score: 46.6 bits (109), Expect = 3.0e-05 Identity = 14/47 (29.79%), Postives = 31/47 (65.96%), Query Frame = 0
BLAST of MELO3C034623 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). ) HSP 1 Score: 46.6 bits (109), Expect = 3.0e-05 Identity = 14/47 (29.79%), Postives = 31/47 (65.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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