MELO3C034528 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034528
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	NBS-LRR type resistance protein
Location	chr10: 23478411 .. 23479313 (+)
RNA-Seq Expression	MELO3C034528
Synteny	MELO3C034528

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCTTCTCACCTACTCATGATTCAAATGCAAACCTTCTCACATCGAACTTGAACAGCAACCTAGGTCTATAAACTAGATACAATTTGTGTAGGTAACGATGACACATGATTTGCGTCAATGTAAGGGTATTGATGACAATATATTGGTGTCGAGTTATAGATAACGGCGATATATTTATTGCATCAAGGTAAAGGTATTAATGACACAATTTTAGTGTCATCTAAACATATTTAAGGGCACGTTTTTCAAAGTTTCGTTAAATAACCTTTCTTGATAGTGGCTTCAATGACGCAAAAAATTATGTCGTTGAAAGTCATTAAGACATAAAATTTGTGTCATTAAAGTCGTTTTTAGAACGACAGTACAAGCTCGTTGAGAGAAAAGAGGAGTCGATCAATCGTGTGGAGTTGTTCCGGGAAACATACGTTCGAGCTGGGACGTTCGTGCCGCAGGCCGCAGAGGATGCGCATGTAAGTTATGCCCTTATTAATTATCTTCTTTCATTATATATTTTTTGCGCATTACCTAACATAGTTTTTAAATTTTTGTAGAATAAAATGCTGGAACTCCAATTCTAGCCTACCCCAGAGGGTAGTCAGCCATTCTCTGAGGATGAGATATGCGATCAGGTGTTGGGTAGATGACCAGGCTACTCAAAAGGCCTTGGTTGGGGATCCAAGCCGAAGACCTGTAGGACGACGAGTGCGAGCAGTTCATCGACATCTTGTTCGCAGTCCACACAAAAAGAGATTGAATTACAAGCTAAACTTAATGAAGTTTTGGAACGGATTAAAGTACAAGATAGAAATCACCAAGTGTTAGCTTCACAAGTGGAAACAATGAAAAAGATGATAGAAGAATTAACTCGTGCACAACAGGGACCACCACGTGATCCCTAG

mRNA sequence

ATGACCTTCTCACCTACTCATGATTCAAATGCAAACCTTCTCACATCGAACTTGAACAGCAACCTAGAACGACAGTACAAGCTCGTTGAGAGAAAAGAGGAGTCGATCAATCGTGTGGAGTTGTTCCGGGAAACATACGTTCGAGCTGGGACGTTCGTGCCGCAGGCCGCAGAGGATGCGCATCCTACCCCAGAGGGTAGTCAGCCATTCTCTGAGGATGAGATATGCGATCAGGTGTTGGGTAGATGACCAGGCTACTCAAAAGGCCTTGGTTGGGGATCCAAGCCGAAGACCTGTAGGACGACGAGTGCGAGCAGTTCATCGACATCTTGTTCGCAGTCCACACAAAAAGAGATTGAATTACAAGCTAAACTTAATGAAGTTTTGGAACGGATTAAAGTACAAGATAGAAATCACCAAGTGTTAGCTTCACAAGTGGAAACAATGAAAAAGATGATAGAAGAATTAACTCGTGCACAACAGGGACCACCACGTGATCCCTAG

Coding sequence (CDS)

ATGCGCATCCTACCCCAGAGGGTAGTCAGCCATTCTCTGAGGATGAGATATGCGATCAGGTGTTGGGTAGATGACCAGGCTACTCAAAAGGCCTTGGTTGGGGATCCAAGCCGAAGACCTGTAGGACGACGAGTGCGAGCAGTTCATCGACATCTTGTTCGCAGTCCACACAAAAAGAGATTGAATTACAAGCTAAACTTAATGAAGTTTTGGAACGGATTAAAGTACAAGATAGAAATCACCAAGTGTTAG

Protein sequence

MRILPQRVVSHSLRMRYAIRCWVDDQATQKALVGDPSRRPVGRRVRAVHRHLVRSPHKKRLNYKLNLMKFWNGLKYKIEITKC

Homology

[Close]

BLAST of MELO3C034528 vs. NCBI nr
Match: KAA0048671.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 148.3 bits (373), Expect = 3.0e-32
Identity = 71/79 (89.87%), Postives = 73/79 (92.41%), Query Frame = 0


Query: 4   LPQRVVSHSLRMRYAIRCWVDDQATQKALVGDPSRRPVGRRVRAVHRHLVRSPHKKRLNY 63
           LPQRVVSHSLRMRYAIRCWVDDQATQKALVGDPSRRP  R+V+AV RH VRSPHKKRLNY
Sbjct: 46  LPQRVVSHSLRMRYAIRCWVDDQATQKALVGDPSRRPAERQVQAVRRHFVRSPHKKRLNY 105

Query: 64  KLNLMKFWNGLKYKIEITK 83
           KLN MK WNGLKYKIEITK
Sbjct: 106 KLNFMKLWNGLKYKIEITK 124

[Close]

BLAST of MELO3C034528 vs. NCBI nr
Match: TYK02447.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 147.5 bits (371), Expect = 5.1e-32
Identity = 71/79 (89.87%), Postives = 73/79 (92.41%), Query Frame = 0


Query: 4  LPQRVVSHSLRMRYAIRCWVDDQATQKALVGDPSRRPVGRRVRAVHRHLVRSPHKKRLNY 63
          LPQRVVSHSLRMRYAIRCWVDD ATQKALVGDPSRRPV RRV+AV RHL+RSP KKRLNY
Sbjct: 13 LPQRVVSHSLRMRYAIRCWVDDHATQKALVGDPSRRPVERRVQAVRRHLIRSPQKKRLNY 72

Query: 64 KLNLMKFWNGLKYKIEITK 83
          KLN MK WNGLKYKIEITK
Sbjct: 73 KLNFMKLWNGLKYKIEITK 91

[Close]

BLAST of MELO3C034528 vs. NCBI nr
Match: KAA0062115.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 145.6 bits (366), Expect = 1.9e-31
Identity = 71/79 (89.87%), Postives = 72/79 (91.14%), Query Frame = 0


Query: 4   LPQRVVSHSLRMRYAIRCWVDDQATQKALVGDPSRRPVGRRVRAVHRHLVRSPHKKRLNY 63
           LPQRVVSHSLRMRYAIRCWVDDQA QKALVGDPSRRPV RRV+AV RHLVRSP KKRLNY
Sbjct: 341 LPQRVVSHSLRMRYAIRCWVDDQAAQKALVGDPSRRPVERRVQAVRRHLVRSPQKKRLNY 400

Query: 64  KLNLMKFWNGLKYKIEITK 83
           KLN  K WNGLKYKIEITK
Sbjct: 401 KLNFKKLWNGLKYKIEITK 419

[Close]

BLAST of MELO3C034528 vs. NCBI nr
Match: TYK05099.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 144.1 bits (362), Expect = 5.6e-31
Identity = 71/79 (89.87%), Postives = 72/79 (91.14%), Query Frame = 0


Query: 4   LPQRVVSHSLRMRYAIRCWVDDQATQKALVGDPSRRPVGRRVRAVHRHLVRSPHKKRLNY 63
           LPQRVVSHSLRMRYAIR WVDDQATQKALVGDPSRRP  RRV+AV RHLVRSP KKRLNY
Sbjct: 46  LPQRVVSHSLRMRYAIRYWVDDQATQKALVGDPSRRPAERRVQAVRRHLVRSPQKKRLNY 105

Query: 64  KLNLMKFWNGLKYKIEITK 83
           KLN MK WNGLKYKIEITK
Sbjct: 106 KLNFMKLWNGLKYKIEITK 124

[Close]

BLAST of MELO3C034528 vs. NCBI nr
Match: KAA0043579.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK19765.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 144.1 bits (362), Expect = 5.6e-31
Identity = 69/78 (88.46%), Postives = 72/78 (92.31%), Query Frame = 0


Query: 4   LPQRVVSHSLRMRYAIRCWVDDQATQKALVGDPSRRPVGRRVRAVHRHLVRSPHKKRLNY 63
           LPQRVVSHSLRMRYAIRCW+DDQATQKALVGDPSRRPV RRV+AV RHL+RS  KKRLNY
Sbjct: 58  LPQRVVSHSLRMRYAIRCWIDDQATQKALVGDPSRRPVKRRVQAVRRHLIRSSQKKRLNY 117

Query: 64  KLNLMKFWNGLKYKIEIT 82
           KLN MK WNGLKYKIEIT
Sbjct: 118 KLNFMKLWNGLKYKIEIT 135

[Close]

BLAST of MELO3C034528 vs. ExPASy TrEMBL
Match: A0A5A7U512 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold670G00200 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.4e-32
Identity = 71/79 (89.87%), Postives = 73/79 (92.41%), Query Frame = 0


Query: 4   LPQRVVSHSLRMRYAIRCWVDDQATQKALVGDPSRRPVGRRVRAVHRHLVRSPHKKRLNY 63
           LPQRVVSHSLRMRYAIRCWVDDQATQKALVGDPSRRP  R+V+AV RH VRSPHKKRLNY
Sbjct: 46  LPQRVVSHSLRMRYAIRCWVDDQATQKALVGDPSRRPAERQVQAVRRHFVRSPHKKRLNY 105

Query: 64  KLNLMKFWNGLKYKIEITK 83
           KLN MK WNGLKYKIEITK
Sbjct: 106 KLNFMKLWNGLKYKIEITK 124

[Close]

BLAST of MELO3C034528 vs. ExPASy TrEMBL
Match: A0A5D3BSP0 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1738G00560 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.4e-32
Identity = 71/79 (89.87%), Postives = 73/79 (92.41%), Query Frame = 0


Query: 4  LPQRVVSHSLRMRYAIRCWVDDQATQKALVGDPSRRPVGRRVRAVHRHLVRSPHKKRLNY 63
          LPQRVVSHSLRMRYAIRCWVDD ATQKALVGDPSRRPV RRV+AV RHL+RSP KKRLNY
Sbjct: 13 LPQRVVSHSLRMRYAIRCWVDDHATQKALVGDPSRRPVERRVQAVRRHLIRSPQKKRLNY 72

Query: 64 KLNLMKFWNGLKYKIEITK 83
          KLN MK WNGLKYKIEITK
Sbjct: 73 KLNFMKLWNGLKYKIEITK 91

[Close]

BLAST of MELO3C034528 vs. ExPASy TrEMBL
Match: A0A5A7V882 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004710 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 9.3e-32
Identity = 71/79 (89.87%), Postives = 72/79 (91.14%), Query Frame = 0


Query: 4   LPQRVVSHSLRMRYAIRCWVDDQATQKALVGDPSRRPVGRRVRAVHRHLVRSPHKKRLNY 63
           LPQRVVSHSLRMRYAIRCWVDDQA QKALVGDPSRRPV RRV+AV RHLVRSP KKRLNY
Sbjct: 341 LPQRVVSHSLRMRYAIRCWVDDQAAQKALVGDPSRRPVERRVQAVRRHLVRSPQKKRLNY 400

Query: 64  KLNLMKFWNGLKYKIEITK 83
           KLN  K WNGLKYKIEITK
Sbjct: 401 KLNFKKLWNGLKYKIEITK 419

[Close]

BLAST of MELO3C034528 vs. ExPASy TrEMBL
Match: A0A5A7TQY0 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1286G00050 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.7e-31
Identity = 69/78 (88.46%), Postives = 72/78 (92.31%), Query Frame = 0


Query: 4   LPQRVVSHSLRMRYAIRCWVDDQATQKALVGDPSRRPVGRRVRAVHRHLVRSPHKKRLNY 63
           LPQRVVSHSLRMRYAIRCW+DDQATQKALVGDPSRRPV RRV+AV RHL+RS  KKRLNY
Sbjct: 58  LPQRVVSHSLRMRYAIRCWIDDQATQKALVGDPSRRPVKRRVQAVRRHLIRSSQKKRLNY 117

Query: 64  KLNLMKFWNGLKYKIEIT 82
           KLN MK WNGLKYKIEIT
Sbjct: 118 KLNFMKLWNGLKYKIEIT 135

[Close]

BLAST of MELO3C034528 vs. ExPASy TrEMBL
Match: A0A5D3C3Z9 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1769G00020 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.7e-31
Identity = 71/79 (89.87%), Postives = 72/79 (91.14%), Query Frame = 0


Query: 4   LPQRVVSHSLRMRYAIRCWVDDQATQKALVGDPSRRPVGRRVRAVHRHLVRSPHKKRLNY 63
           LPQRVVSHSLRMRYAIR WVDDQATQKALVGDPSRRP  RRV+AV RHLVRSP KKRLNY
Sbjct: 46  LPQRVVSHSLRMRYAIRYWVDDQATQKALVGDPSRRPAERRVQAVRRHLVRSPQKKRLNY 105

Query: 64  KLNLMKFWNGLKYKIEITK 83
           KLN MK WNGLKYKIEITK
Sbjct: 106 KLNFMKLWNGLKYKIEITK 124

The following BLAST results are available for this feature:

BLAST of MELO3C034528 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048671.1	3.0e-32	89.87	NBS-LRR type resistance protein [Cucumis melo var. makuwa]	[more]
TYK02447.1	5.1e-32	89.87	NBS-LRR type resistance protein [Cucumis melo var. makuwa]	[more]
KAA0062115.1	1.9e-31	89.87	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYK05099.1	5.6e-31	89.87	NBS-LRR type resistance protein [Cucumis melo var. makuwa]	[more]
KAA0043579.1	5.6e-31	88.46	NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK19765.1 NBS-LRR t...	[more]

BLAST of MELO3C034528 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C034528 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U512	1.4e-32	89.87	NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3BSP0	2.4e-32	89.87	NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7V882	9.3e-32	89.87	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5A7TQY0	2.7e-31	88.46	NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3C3Z9	2.7e-31	89.87	NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of MELO3C034528 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034528.1	MELO3C034528.1	mRNA