MELO3C034521 (gene) Melon (DHL92) v4

Overview
NameMELO3C034521
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr10: 22844462 .. 22845158 (-)
RNA-Seq ExpressionMELO3C034521
SyntenyMELO3C034521
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAAACCCCCTTCGTTCCATAAATGGAGTCAATTTTGGGAGTAAATGTGAAGCTCACGACCCTATAACCTAAACGTGGGGTTTTGGGTCTCTTCGTCTAATTCAGTAGTGACTGTGAGATTGTGAAGAAATGAAATCAGGGATTTCGTCTTCTTCAGTTGAAGCTTTGAGGAACGGAGGAGAAGGAATCGCCTCCGCCCTATCTTCTTCCGATCACTCTCGCTTGTTGCTTGCCAATAGACCTCCCAGGTACTTTCTTCTCTCTCTTCTCTCTCTTCTCTCCCTTCATTCTCTTTGGATTAAACCCTCTCATACGCCTTCATTGGTGTCGGGGCTGACAGCACTGCCTCCTGCCTATGAATTCCTTTGATTTTCTTTCATTTTACTGCATTCACTACAAGGGTTGAAGGGATTTATTGAAATTTTTAAGAGACTAGTCTCAATTTGACAACTCGACCGCCGGACAGGTTCCGATATCCCTCTCCCTTTTAGGTTGCCATAACGAAGAAAAAGAGTGCCAAGAAACAAAACACACCCTTCCCTTTTGGTTTGAATCTATCAAACTTGATCAACTATTTATGACTAATCCTAATGCAGGGGAGCTCCTAATAGACTTGAGCCCTTTAATTCTAGTTTCCAGCATCAATATATAAATGCTTCTGGATCGATTAAACATGTAATTTTAACCTTGAAAACAA

mRNA sequence

CCAAACCCCCTTCGTTCCATAAATGGAGTCAATTTTGGGAGTAAATGTGAAGCTCACGACCCTATAACCTAAACGTGGGGTTTTGGGTCTCTTCGTCTAATTCAGTAGTGACTGTGAGATTGTGAAGAAATGAAATCAGGGATTTCGTCTTCTTCAGTTGAAGCTTTGAGGAACGGAGGAGAAGGAATCGCCTCCGCCCTATCTTCTTCCGATCACTCTCGCTTGTTGCTTGCCAATAGACCTCCCAGGGGAGCTCCTAATAGACTTGAGCCCTTTAATTCTAGTTTCCAGCATCAATATATAAATGCTTCTGGATCGATTAAACATGTAATTTTAACCTTGAAAACAA

Coding sequence (CDS)

ATGAAATCAGGGATTTCGTCTTCTTCAGTTGAAGCTTTGAGGAACGGAGGAGAAGGAATCGCCTCCGCCCTATCTTCTTCCGATCACTCTCGCTTGTTGCTTGCCAATAGACCTCCCAGGGGAGCTCCTAATAGACTTGAGCCCTTTAATTCTAGTTTCCAGCATCAATATATAAATGCTTCTGGATCGATTAAACATGTAATTTTAACCTTGAAAACA

Protein sequence

MKSGISSSSVEALRNGGEGIASALSSSDHSRLLLANRPPRGAPNRLEPFNSSFQHQYINASGSIKHVILTLKT
Homology
[Close]
BLAST of MELO3C034521 vs. NCBI nr
Match: KGN51411.1 (hypothetical protein Csa_007923 [Cucumis sativus])

HSP 1 Score: 64.7 bits (156), Expect = 3.8e-07
Identity = 35/40 (87.50%), Postives = 36/40 (90.00%), Query Frame = 0 

Query: 1  MKSGISSSSVEALRNGGEGIASALSSSDHSRLLLANRPPR 41
          MKSGISSSSVEALRN GEGIAS+LSS DHSR LLA RPPR
Sbjct: 1  MKSGISSSSVEALRNKGEGIASSLSSYDHSRFLLATRPPR 40

[Close]
BLAST of MELO3C034521 vs. NCBI nr
Match: XP_038893067.1 (uncharacterized protein LOC120081950 [Benincasa hispida])

HSP 1 Score: 64.7 bits (156), Expect = 3.8e-07
Identity = 35/40 (87.50%), Postives = 36/40 (90.00%), Query Frame = 0 

Query: 1  MKSGISSSSVEALRNGGEGIASALSSSDHSRLLLANRPPR 41
          MKSG+SSSSVE LRN GEGIASALSSSD SRLLLA RPPR
Sbjct: 1  MKSGVSSSSVEVLRNRGEGIASALSSSDQSRLLLATRPPR 40

[Close]
BLAST of MELO3C034521 vs. NCBI nr
Match: XP_022956291.1 (uncharacterized protein LOC111458016 [Cucurbita moschata])

HSP 1 Score: 54.3 bits (129), Expect = 5.1e-04
Identity = 33/40 (82.50%), Postives = 33/40 (82.50%), Query Frame = 0 

Query: 1  MKSGISSSSVEALRNGGEGIASALSSSDHSRLLLANRPPR 41
          MKS    SSVEALRN GEGIASALSSSD SRLLLA RPPR
Sbjct: 1  MKSAALPSSVEALRN-GEGIASALSSSDQSRLLLATRPPR 39

[Close]
BLAST of MELO3C034521 vs. NCBI nr
Match: XP_023540347.1 (uncharacterized protein LOC111800746 [Cucurbita pepo subsp. pepo] >KAG6597021.1 hypothetical protein SDJN03_10201, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028499.1 hypothetical protein SDJN02_09680 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 54.3 bits (129), Expect = 5.1e-04
Identity = 33/40 (82.50%), Postives = 33/40 (82.50%), Query Frame = 0 

Query: 1  MKSGISSSSVEALRNGGEGIASALSSSDHSRLLLANRPPR 41
          MKS    SSVEALRN GEGIASALSSSD SRLLLA RPPR
Sbjct: 1  MKSAALPSSVEALRN-GEGIASALSSSDQSRLLLATRPPR 39

[Close]
BLAST of MELO3C034521 vs. ExPASy TrEMBL
Match: A0A0A0KUK2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G529450 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.8e-07
Identity = 35/40 (87.50%), Postives = 36/40 (90.00%), Query Frame = 0 

Query: 1  MKSGISSSSVEALRNGGEGIASALSSSDHSRLLLANRPPR 41
          MKSGISSSSVEALRN GEGIAS+LSS DHSR LLA RPPR
Sbjct: 1  MKSGISSSSVEALRNKGEGIASSLSSYDHSRFLLATRPPR 40

[Close]
BLAST of MELO3C034521 vs. ExPASy TrEMBL
Match: A0A6J1GW53 (uncharacterized protein LOC111458016 OS=Cucurbita moschata OX=3662 GN=LOC111458016 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.5e-04
Identity = 33/40 (82.50%), Postives = 33/40 (82.50%), Query Frame = 0 

Query: 1  MKSGISSSSVEALRNGGEGIASALSSSDHSRLLLANRPPR 41
          MKS    SSVEALRN GEGIASALSSSD SRLLLA RPPR
Sbjct: 1  MKSAALPSSVEALRN-GEGIASALSSSDQSRLLLATRPPR 39

[Close]
BLAST of MELO3C034521 vs. ExPASy TrEMBL
Match: A0A6J1I9S5 (uncharacterized protein LOC111472885 OS=Cucurbita maxima OX=3661 GN=LOC111472885 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 9.4e-04
Identity = 32/40 (80.00%), Postives = 33/40 (82.50%), Query Frame = 0 

Query: 1  MKSGISSSSVEALRNGGEGIASALSSSDHSRLLLANRPPR 41
          MKS    SSVEALR+ GEGIASALSSSD SRLLLA RPPR
Sbjct: 1  MKSAALPSSVEALRS-GEGIASALSSSDQSRLLLATRPPR 39

The following BLAST results are available for this feature:
BLAST of MELO3C034521 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN51411.13.8e-0787.50hypothetical protein Csa_007923 [Cucumis sativus][more]
XP_038893067.13.8e-0787.50uncharacterized protein LOC120081950 [Benincasa hispida][more]
XP_022956291.15.1e-0482.50uncharacterized protein LOC111458016 [Cucurbita moschata][more]
XP_023540347.15.1e-0482.50uncharacterized protein LOC111800746 [Cucurbita pepo subsp. pepo] >KAG6597021.1 ... [more]
BLAST of MELO3C034521 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034521 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUK21.8e-0787.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G529450 PE=4 SV=1[more]
A0A6J1GW532.5e-0482.50uncharacterized protein LOC111458016 OS=Cucurbita moschata OX=3662 GN=LOC1114580... [more]
A0A6J1I9S59.4e-0480.00uncharacterized protein LOC111472885 OS=Cucurbita maxima OX=3661 GN=LOC111472885... [more]
BLAST of MELO3C034521 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034521.1MELO3C034521.1mRNA