MELO3C034516 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034516
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Structural maintenance of chromosomes protein
Location	chr10: 22694415 .. 22697671 (-)
RNA-Seq Expression	MELO3C034516
Synteny	MELO3C034516

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATCTCTTGACAGATATCGAAGGAAAGTGGAGGTGTATGATGAAAGAGTTGAGGATCTCAATACAGTCACTCAGCAGCGTGATGCCATGAAGAAGCAATATGATGAATTGAAGAAAAAAAGGCAATTGAATTTTTCTTCTCTTTTTAAGTACTGCAATTATTGACTAAATGAACCCAAAAGCTTTAAGTTGACGAGTTAGTGGTAAATTCAATTATATCCACACTTCAACAACATTATTCTTTTTCAGGTCTTTGCTTATTAATTATTTGCTTATATACTCTTAGGTTGGACGAGTTTATGTCTGGATTTAATACTATATCTTTGAAGTTGAAGGAAATGTACCAGGTTCTCATCTAAGCTTATTCTCTCTCTTTTTATTTGTCATTCACTTTTACATTCATGTTTCTCTCTTTTGTATGAACCTGAATGATTGTTCTACCACTTGGATTTTGTTGGAATGCCTTGAATATGCTATCTTGTGCTTCAAATGACAAAACATGAAGTCTATAATTTTGGCCTTGGGGATTTGAGGAGTGCACTGTATATAAATTCTCTAACTCAGCGCCTCCACTGTATGTGATTTTATATTCTCTCTAATAAAAAACTTCTCTCTCTATTCGTGGATGAAACTAACGCATTATTAACAAACTTCATAAATTTGTGTCAATTTCTCTATTGTTTACGCTTTCTCGCATTCTTTGTTTGTTAGTTTCATAACTATTTTCTTAAATCAGGCATCACAAGTCCACTTGATGGTTGATGGTTAACAGCCTTCTAGTGGCCTTTCTTTCACAGATCTTTCTTTCCATCCTTTGTTGCTAGTTGTACTTCTGAGCAGTACGCTTTGATATATTCCATTGATGTTTGACAGATGATCACACTTGGAGGTGATGCAGAACTTGAGCTGGTGGACTCTTTGGACCCTTTCTCTGAAGGTGTTGTTTTTAGTGTCAGGCCACCGAAAAAGAGCTGGAAAAATATCGCTAACTTGTCTGGTGGTGAAAAGGTTGGCTGCTTTCTAAATTATCTTGAATGCATATTCTTTTTCAGCAAAATGGTTGAGAAGTGCATTCTGTATACCTTTAAACTACCATAGTAACAAGACTTCTTATCTCATCACCCCTTGGCATTTATCATGTGGCATATATGTTGAATTCTAATGGAATCGCTTTTCTTTCAGACTCTAAGCTCTTTAGCTCTTGTTTTTGCACTTCATCACTACAAGCCGACTCCGCTTTATGTGATGGACGAAATTGATGCTGCTTTAGGTAACTTCGCTGAGCATTTAATTCTTTTTTCTTCTCCCTGTCTGCTTAGCTTATAATTCATAGATAAAAAGATCCACTTCATTTATCTATTGTTATTGTGGATTTAGATTTCAAAAACGTATCGATTGTTGGGCATTATGTGAAGGACAGAACCAAGGATGCTCAGTTCATCATTATAAGGTTTGATGAACCCGCCAAGTGCGAAGTTGGTATTTAGGGATGCAATGTTATTTATGATTGATTTTGTGTTTTATAATATGTACAGCTTGAGGAACAATATGTTTGAATTAGCGGACAGACTAGTGGGGATCTATAAAACCAATAACTGCACAAAGAGCATAACCATCAATCCAAGGAGCTTTTCAGTATGTGAGAAAATTGCTTGACATTTTCCTTTTGGTTTTCTTATGTATATAAGTACGTGTGTACATATAGATATATATGACAAAACAAAAAGGAAGAGAAAACTAGTTATCTTTTTTTTTTTTTTTTTTGTTCTTTTTCCATTTTGTTTGTAAGCCACTTCATATGGCATATTTGTGATGGGAGTTTGATGTTCAAAGGCATTATTGAACATAGGTATTTGTAAGTTGTGTGTAATTGGACGTTTCAAATGATGAATGGGTAATTGCCATTGTATCCCCACATTTAGTTGAAAGGTGTTGGCACAAAGCAAGTGGGGCAGCTGATTTGAAGTTATGTCAAATAAATCCGACATGAAAGAGAACAAAATTTAACCGTTAATTTAAGTCTTTGTTATTTAGGTTCTGTTTTTTCTACCAAAAGTTTTTCATTTTTCATTTTTGAAAATCAAGCTCTTTTTCTTTCCTCTTTTTTTTTTTACCATAAATTGCGTATTTCTCTAAGTCAGATTCAAAAAATAAAAACAAAAAATCATTGTTATCAAATGGTGTCTTGGTTTTGATTTTCGTAAATTGTAAAACATACTTTTGATTTTCGTAAATTGTAAAACATACTTTTGATTTTTATTTTTAAAAGTAGTACATTATTTTTAAACTTGTAAAGCTGTTTTTCTCTCCATCTCGTGCGAAATCAACAATCGAGATTTACCCAAAAATATTTAAAAAATTTCAACTTATCGATTGTTTTGGTTATTTTTAGTTGTTGGGTGCATCTTGATAGACATTATATTAAGATTCTGTTTTTTTTTCAAATCTTTCTCATATTTTTGGCCAATTCCTTAATTGAGTAAATTCAAATTACCGCTCAAAACATACTGTTAGAATTAGTAGGGTTTTGCCCTAGAGTACTTTTGGATAGAATAATATATAAGATTTTATTTCCTAAATATTTCCTAGATCTTTTCCTTTTTTATTCATATTGTACTTTATTTATTCTCCCTTTGTACCTGTTGTATTCAGTTCATAAGAAAAATAATAAAAACTAAAGTATCGTGGTTTTTCTCCTAGTTTTCGGGTTTCCATGTAAGTCTCGGGTTGTTGTTAATTGCTTTCAATATGGTATCAGAGCAAAGCAATAACGAAATCCTAGAAAATAACCTAGGAGAAACCCAGATCGAAATTAAACCCGTCACTGTCGCCGCTGCCGTGGACGTCGCCTTCTCTGTCGCCATGGAGAAACTGCTCCAGAACCTACAGAAATCGCCGATCTACCCAATAGGAGTGGTTCCATAGTCGTACGCACCGCCGTCTGACCAGAAGGTGATGCACGCGCCGCCGTCGTTTCACGTCACCGCCCAGCCCGTTCCCTTCTATGCGTCGTCAGATGTCCAATCGTCAAACCCCTCCGGCCATCCGCATCCTCACACGCCGTCTATGAGCTCCGAACCGTAAATCTGTCAAATCTGTACAGTAATCATCCACTGTACATTGACTCTTTACAGCAACCGCTGTTTTCTGGTAACGGAATTGATCAACCTCAGAACAGATCGAACATTGAAGCGGGTGAATCTTCGACGCATTCCAAAGCAACCGAGTTGCCGATGTATTCCAAGAACCTGGTA

mRNA sequence

ATGCCATCTCTTGACAGATATCGAAGGAAAGTGGAGGTGTATGATGAAAGAGTTGAGGATCTCAATACAGTCACTCAGCAGCGTGATGCCATGAAGAAGCAATATGATGAATTGAAGAAAAAAAGGCAATTGAATTTTTCTTCTCTTTTTAAGTTGGACGAGTTTATGTCTGGATTTAATACTATATCTTTGAAGTTGAAGGAAATGTACCAGATGATCACACTTGGAGGTGATGCAGAACTTGAGCTGGTGGACTCTTTGGACCCTTTCTCTGAAGGTGTTGTTTTTAGTGTCAGGCCACCGAAAAAGAGCTGGAAAAATATCGCTAACTTGTCTGGTGGTGAAAAGACTCTAAGCTCTTTAGCTCTTGTTTTTGCACTTCATCACTACAAGCCGACTCCGCTTTATGTGATGGACGAAATTGATGCTGCTTTAGATTTCAAAAACGTATCGATTGTTGGGCATTATGTGAAGGACAGAACCAAGGATGCTCAGTTCATCATTATAAGGTTTGATGAACCCGCCAAGTGCGAAGTTGAGCAAAGCAATAACGAAATCCTAGAAAATAACCTAGGAGAAACCCAGATCGAAATTAAACCCGTCACTGTCGCCGCTGCCGTGGACGTCGCCTTCTCTGTCGCCATGGAGAAACTGCTCCAGAACCTACAGAAATCGCCGATCTACCCAATAGGAGTGGTTCCATAGTCGTACGCACCGCCGTCTGACCAGAAGGTGATGCACGCGCCGCCGTCGTTTCACGTCACCGCCCAGCCCGTTCCCTTCTATGCGTCGTCAGATGTCCAATCGTCAAACCCCTCCGGCCATCCGCATCCTCACACGCCGTCTATGAGCTCCGAACCTAATCATCCACTGTACATTGACTCTTTACAGCAACCGCTGTTTTCTGGTAACGGAATTGATCAACCTCAGAACAGATCGAACATTGAAGCGGGTGAATCTTCGACGCATTCCAAAGCAACCGAGTTGCCGATGTATTCCAAGAACCTGGTA

Coding sequence (CDS)

ATGCCATCTCTTGACAGATATCGAAGGAAAGTGGAGGTGTATGATGAAAGAGTTGAGGATCTCAATACAGTCACTCAGCAGCGTGATGCCATGAAGAAGCAATATGATGAATTGAAGAAAAAAAGGCAATTGAATTTTTCTTCTCTTTTTAAGTTGGACGAGTTTATGTCTGGATTTAATACTATATCTTTGAAGTTGAAGGAAATGTACCAGATGATCACACTTGGAGGTGATGCAGAACTTGAGCTGGTGGACTCTTTGGACCCTTTCTCTGAAGGTGTTGTTTTTAGTGTCAGGCCACCGAAAAAGAGCTGGAAAAATATCGCTAACTTGTCTGGTGGTGAAAAGACTCTAAGCTCTTTAGCTCTTGTTTTTGCACTTCATCACTACAAGCCGACTCCGCTTTATGTGATGGACGAAATTGATGCTGCTTTAGATTTCAAAAACGTATCGATTGTTGGGCATTATGTGAAGGACAGAACCAAGGATGCTCAGTTCATCATTATAAGGTTTGATGAACCCGCCAAGTGCGAAGTTGAGCAAAGCAATAACGAAATCCTAGAAAATAACCTAGGAGAAACCCAGATCGAAATTAAACCCGTCACTGTCGCCGCTGCCGTGGACGTCGCCTTCTCTGTCGCCATGGAGAAACTGCTCCAGAACCTACAGAAATCGCCGATCTACCCAATAGGAGTGGTTCCATAG

Protein sequence

MPSLDRYRRKVEVYDERVEDLNTVTQQRDAMKKQYDELKKKRQLNFSSLFKLDEFMSGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIRFDEPAKCEVEQSNNEILENNLGETQIEIKPVTVAAAVDVAFSVAMEKLLQNLQKSPIYPIGVVP

Homology

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BLAST of MELO3C034516 vs. NCBI nr
Match: XP_008460572.1 (PREDICTED: LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 4 [Cucumis melo])

HSP 1 Score: 300.1 bits (767), Expect = 1.7e-77
Identity = 155/169 (91.72%), Postives = 157/169 (92.90%), Query Frame = 0


Query: 1    MPSLDRYRRKVEVYDERVEDLNTVTQQRDAMKKQYDELKKKRQLNFSSLFKLDEFMSGFN 60
            + S+  YRRKVEVYDERVEDLNTVTQQRDAMKKQYDELKKKR         LDEFMSGFN
Sbjct: 1046 LDSITEYRRKVEVYDERVEDLNTVTQQRDAMKKQYDELKKKR---------LDEFMSGFN 1105

Query: 61   TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 120
            TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS
Sbjct: 1106 TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 1165

Query: 121  LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 170
            LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII
Sbjct: 1166 LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 1205

[Close]

BLAST of MELO3C034516 vs. NCBI nr
Match: XP_011655432.1 (structural maintenance of chromosomes protein 4 [Cucumis sativus] >KGN51909.2 hypothetical protein Csa_009189 [Cucumis sativus])

HSP 1 Score: 294.7 bits (753), Expect = 7.2e-76
Identity = 152/169 (89.94%), Postives = 156/169 (92.31%), Query Frame = 0


Query: 1    MPSLDRYRRKVEVYDERVEDLNTVTQQRDAMKKQYDELKKKRQLNFSSLFKLDEFMSGFN 60
            + S+  YRRKVEVY+ERVEDLNTVTQQRD +KKQYDELKKKR         LDEFMSGFN
Sbjct: 1046 LDSITEYRRKVEVYNERVEDLNTVTQQRDIVKKQYDELKKKR---------LDEFMSGFN 1105

Query: 61   TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 120
            TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS
Sbjct: 1106 TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 1165

Query: 121  LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 170
            LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII
Sbjct: 1166 LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 1205

[Close]

BLAST of MELO3C034516 vs. NCBI nr
Match: XP_038876535.1 (structural maintenance of chromosomes protein 4 isoform X2 [Benincasa hispida])

HSP 1 Score: 293.5 bits (750), Expect = 1.6e-75
Identity = 151/169 (89.35%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 1    MPSLDRYRRKVEVYDERVEDLNTVTQQRDAMKKQYDELKKKRQLNFSSLFKLDEFMSGFN 60
            + S+  YRRKVEVY+ERVEDLNTVTQQRD MKKQYDEL+KKR         LDEFMSGFN
Sbjct: 1046 LDSITEYRRKVEVYNERVEDLNTVTQQRDGMKKQYDELRKKR---------LDEFMSGFN 1105

Query: 61   TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 120
             ISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS
Sbjct: 1106 AISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 1165

Query: 121  LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 170
            LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII
Sbjct: 1166 LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 1205

[Close]

BLAST of MELO3C034516 vs. NCBI nr
Match: XP_038876534.1 (structural maintenance of chromosomes protein 4 isoform X1 [Benincasa hispida])

HSP 1 Score: 293.5 bits (750), Expect = 1.6e-75
Identity = 151/169 (89.35%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 1    MPSLDRYRRKVEVYDERVEDLNTVTQQRDAMKKQYDELKKKRQLNFSSLFKLDEFMSGFN 60
            + S+  YRRKVEVY+ERVEDLNTVTQQRD MKKQYDEL+KKR         LDEFMSGFN
Sbjct: 1047 LDSITEYRRKVEVYNERVEDLNTVTQQRDGMKKQYDELRKKR---------LDEFMSGFN 1106

Query: 61   TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 120
             ISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS
Sbjct: 1107 AISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 1166

Query: 121  LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 170
            LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII
Sbjct: 1167 LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 1206

[Close]

BLAST of MELO3C034516 vs. NCBI nr
Match: XP_023538680.1 (structural maintenance of chromosomes protein 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.4 bits (747), Expect = 3.6e-75
Identity = 151/169 (89.35%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 1    MPSLDRYRRKVEVYDERVEDLNTVTQQRDAMKKQYDELKKKRQLNFSSLFKLDEFMSGFN 60
            + S+ RYRRKVEVY ERVEDLNTVTQQRD MKK+YDEL+KKR         LDEFMSGFN
Sbjct: 1045 LDSITRYRRKVEVYTERVEDLNTVTQQRDDMKKKYDELRKKR---------LDEFMSGFN 1104

Query: 61   TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 120
             ISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS
Sbjct: 1105 AISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 1164

Query: 121  LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 170
            LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII
Sbjct: 1165 LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 1204

[Close]

BLAST of MELO3C034516 vs. ExPASy Swiss-Prot
Match: Q9FJL0 (Structural maintenance of chromosomes protein 4 OS=Arabidopsis thaliana OX=3702 GN=SMC4 PE=1 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.0e-73
Identity = 141/169 (83.43%), Postives = 153/169 (90.53%), Query Frame = 0


Query: 1    MPSLDRYRRKVEVYDERVEDLNTVTQQRDAMKKQYDELKKKRQLNFSSLFKLDEFMSGFN 60
            + S+  YR KVE+Y+ RV++LN+VTQ+RD  +KQYDEL+K+R         LDEFM+GFN
Sbjct: 1041 LDSIAEYRSKVELYNGRVDELNSVTQERDDTRKQYDELRKRR---------LDEFMAGFN 1100

Query: 61   TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 120
            TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS
Sbjct: 1101 TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 1160

Query: 121  LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 170
            LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII
Sbjct: 1161 LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 1200

[Close]

BLAST of MELO3C034516 vs. ExPASy Swiss-Prot
Match: P50532 (Structural maintenance of chromosomes protein 4 OS=Xenopus laevis OX=8355 GN=smc4 PE=1 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.1e-58
Identity = 113/167 (67.66%), Postives = 140/167 (83.83%), Query Frame = 0


Query: 3    SLDRYRRKVEVYDERVEDLNTVTQQRDAMKKQYDELKKKRQLNFSSLFKLDEFMSGFNTI 62
            ++  Y++K E+Y +RV +L+ +T +RD+ ++ Y++L+K+R         L+EFM+GFN I
Sbjct: 1086 AIAEYKKKEELYLQRVAELDEITNERDSFRRAYEDLRKQR---------LNEFMAGFNII 1145

Query: 63   SLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLA 122
            + KLKE YQM+TLGGDAELELVDSLDPFSEG++FSVRPPKKSWK I NLSGGEKTLSSLA
Sbjct: 1146 TNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLA 1205

Query: 123  LVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 170
            LVFALHHYKPTPLY MDEIDAALDFKNVSIV  Y+ ++TK+AQFIII
Sbjct: 1206 LVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIII 1243

[Close]

BLAST of MELO3C034516 vs. ExPASy Swiss-Prot
Match: Q12267 (Structural maintenance of chromosomes protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SMC4 PE=1 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.4e-58
Identity = 116/166 (69.88%), Postives = 134/166 (80.72%), Query Frame = 0


Query: 4    LDRYRRKVEVYDERVEDLNTVTQQRDAMKKQYDELKKKRQLNFSSLFKLDEFMSGFNTIS 63
            L+ Y R++  +  R  DLN   Q+RD +K+Q   LKKKR          DEFM+GFN IS
Sbjct: 1225 LEEYARRLAEFKRRKLDLNNAVQKRDEVKEQLGILKKKR---------FDEFMAGFNIIS 1284

Query: 64   LKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLAL 123
            + LKEMYQMIT+GG+AELELVDSLDPFSEGV FSV PPKKSW+NI NLSGGEKTLSSLAL
Sbjct: 1285 MTLKEMYQMITMGGNAELELVDSLDPFSEGVTFSVMPPKKSWRNITNLSGGEKTLSSLAL 1344

Query: 124  VFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 170
            VFALH YKPTPLYVMDEIDAALDF+NVSIV +Y+K+RTK+AQFI+I
Sbjct: 1345 VFALHKYKPTPLYVMDEIDAALDFRNVSIVANYIKERTKNAQFIVI 1381

[Close]

BLAST of MELO3C034516 vs. ExPASy Swiss-Prot
Match: Q9NTJ3 (Structural maintenance of chromosomes protein 4 OS=Homo sapiens OX=9606 GN=SMC4 PE=1 SV=2)

HSP 1 Score: 224.2 bits (570), Expect = 1.6e-57
Identity = 112/167 (67.07%), Postives = 139/167 (83.23%), Query Frame = 0


Query: 3    SLDRYRRKVEVYDERVEDLNTVTQQRDAMKKQYDELKKKRQLNFSSLFKLDEFMSGFNTI 62
            ++  Y++K E+Y +RV +L+ +T +RD+ ++ Y++L+K+R         L+EFM+GF  I
Sbjct: 1092 AIAEYKKKEELYLQRVAELDKITYERDSFRQAYEDLRKQR---------LNEFMAGFYII 1151

Query: 63   SLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLA 122
            + KLKE YQM+TLGGDAELELVDSLDPFSEG++FSVRPPKKSWK I NLSGGEKTLSSLA
Sbjct: 1152 TNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLA 1211

Query: 123  LVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 170
            LVFALHHYKPTPLY MDEIDAALDFKNVSIV  Y+ ++TK+AQFIII
Sbjct: 1212 LVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIII 1249

[Close]

BLAST of MELO3C034516 vs. ExPASy Swiss-Prot
Match: Q9ERA5 (Structural maintenance of chromosomes protein 4 (Fragment) OS=Microtus arvalis OX=47230 GN=SMC4 PE=2 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.7e-57
Identity = 112/167 (67.07%), Postives = 138/167 (82.63%), Query Frame = 0


Query: 3    SLDRYRRKVEVYDERVEDLNTVTQQRDAMKKQYDELKKKRQLNFSSLFKLDEFMSGFNTI 62
            ++  Y++K E+Y +RV +L+ +T +RD  ++ Y++L+K+R         L+EFM+GF  I
Sbjct: 1047 AIAEYKKKEELYLQRVAELDKITSERDNFRQAYEDLRKQR---------LNEFMAGFYII 1106

Query: 63   SLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLA 122
            + KLKE YQM+TLGGDAELELVDSLDPFSEG++FSVRPPKKSWK I NLSGGEKTLSSLA
Sbjct: 1107 TNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLA 1166

Query: 123  LVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 170
            LVFALHHYKPTPLY MDEIDAALDFKNVSIV  Y+ ++TK+AQFIII
Sbjct: 1167 LVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIII 1204

[Close]

BLAST of MELO3C034516 vs. ExPASy TrEMBL
Match: A0A1S3CCB7 (Structural maintenance of chromosomes protein OS=Cucumis melo OX=3656 GN=LOC103499364 PE=3 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 8.3e-78
Identity = 155/169 (91.72%), Postives = 157/169 (92.90%), Query Frame = 0


Query: 1    MPSLDRYRRKVEVYDERVEDLNTVTQQRDAMKKQYDELKKKRQLNFSSLFKLDEFMSGFN 60
            + S+  YRRKVEVYDERVEDLNTVTQQRDAMKKQYDELKKKR         LDEFMSGFN
Sbjct: 1046 LDSITEYRRKVEVYDERVEDLNTVTQQRDAMKKQYDELKKKR---------LDEFMSGFN 1105

Query: 61   TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 120
            TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS
Sbjct: 1106 TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 1165

Query: 121  LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 170
            LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII
Sbjct: 1166 LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 1205

[Close]

BLAST of MELO3C034516 vs. ExPASy TrEMBL
Match: A0A0A0KSL0 (Structural maintenance of chromosomes protein 4 OS=Cucumis sativus OX=3659 GN=Csa_5G533470 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 3.5e-76
Identity = 152/169 (89.94%), Postives = 156/169 (92.31%), Query Frame = 0


Query: 1   MPSLDRYRRKVEVYDERVEDLNTVTQQRDAMKKQYDELKKKRQLNFSSLFKLDEFMSGFN 60
           + S+  YRRKVEVY+ERVEDLNTVTQQRD +KKQYDELKKKR         LDEFMSGFN
Sbjct: 508 LDSITEYRRKVEVYNERVEDLNTVTQQRDIVKKQYDELKKKR---------LDEFMSGFN 567

Query: 61  TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 120
           TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS
Sbjct: 568 TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 627

Query: 121 LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 170
           LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII
Sbjct: 628 LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 667

[Close]

BLAST of MELO3C034516 vs. ExPASy TrEMBL
Match: A0A6J1GF37 (Structural maintenance of chromosomes protein OS=Cucurbita moschata OX=3662 GN=LOC111453601 PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 6.6e-75
Identity = 150/169 (88.76%), Postives = 154/169 (91.12%), Query Frame = 0


Query: 1    MPSLDRYRRKVEVYDERVEDLNTVTQQRDAMKKQYDELKKKRQLNFSSLFKLDEFMSGFN 60
            + S+  YRRKVEVY ERVEDLNTVTQQRD MKK+YDEL+KKR         LDEFMSGFN
Sbjct: 1045 LDSITEYRRKVEVYTERVEDLNTVTQQRDDMKKKYDELRKKR---------LDEFMSGFN 1104

Query: 61   TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 120
             ISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS
Sbjct: 1105 AISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 1164

Query: 121  LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 170
            LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII
Sbjct: 1165 LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 1204

[Close]

BLAST of MELO3C034516 vs. ExPASy TrEMBL
Match: A0A6J1I9T1 (Structural maintenance of chromosomes protein OS=Cucurbita maxima OX=3661 GN=LOC111472890 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.5e-74
Identity = 149/169 (88.17%), Postives = 154/169 (91.12%), Query Frame = 0


Query: 1    MPSLDRYRRKVEVYDERVEDLNTVTQQRDAMKKQYDELKKKRQLNFSSLFKLDEFMSGFN 60
            + S+  YRRKV+VY ERVEDLNTVTQQRD MKK+YDEL+KKR         LDEFMSGFN
Sbjct: 1022 LDSITEYRRKVDVYTERVEDLNTVTQQRDDMKKKYDELRKKR---------LDEFMSGFN 1081

Query: 61   TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 120
             ISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS
Sbjct: 1082 AISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 1141

Query: 121  LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 170
            LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII
Sbjct: 1142 LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 1181

[Close]

BLAST of MELO3C034516 vs. ExPASy TrEMBL
Match: A0A6J1D9G1 (Structural maintenance of chromosomes protein OS=Momordica charantia OX=3673 GN=LOC111018134 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 5.6e-74
Identity = 148/169 (87.57%), Postives = 153/169 (90.53%), Query Frame = 0


Query: 1    MPSLDRYRRKVEVYDERVEDLNTVTQQRDAMKKQYDELKKKRQLNFSSLFKLDEFMSGFN 60
            + S+  YR+KVEVY+ERVEDLNT TQQRD MKKQYDE +KKR         LDEFMSGFN
Sbjct: 1045 LDSITEYRKKVEVYNERVEDLNTFTQQRDDMKKQYDEWRKKR---------LDEFMSGFN 1104

Query: 61   TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 120
             ISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS
Sbjct: 1105 AISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 1164

Query: 121  LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 170
            LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII
Sbjct: 1165 LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 1204

[Close]

BLAST of MELO3C034516 vs. TAIR 10
Match: AT5G48600.1 (structural maintenance of chromosome 3 )

HSP 1 Score: 276.9 bits (707), Expect = 1.5e-74
Identity = 141/169 (83.43%), Postives = 153/169 (90.53%), Query Frame = 0


Query: 1    MPSLDRYRRKVEVYDERVEDLNTVTQQRDAMKKQYDELKKKRQLNFSSLFKLDEFMSGFN 60
            + S+  YR KVE+Y+ RV++LN+VTQ+RD  +KQYDEL+K+R         LDEFM+GFN
Sbjct: 1041 LDSIAEYRSKVELYNGRVDELNSVTQERDDTRKQYDELRKRR---------LDEFMAGFN 1100

Query: 61   TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 120
            TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS
Sbjct: 1101 TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 1160

Query: 121  LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 170
            LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII
Sbjct: 1161 LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 1200

[Close]

BLAST of MELO3C034516 vs. TAIR 10
Match: AT5G48600.2 (structural maintenance of chromosome 3 )

HSP 1 Score: 276.9 bits (707), Expect = 1.5e-74
Identity = 141/169 (83.43%), Postives = 153/169 (90.53%), Query Frame = 0


Query: 1    MPSLDRYRRKVEVYDERVEDLNTVTQQRDAMKKQYDELKKKRQLNFSSLFKLDEFMSGFN 60
            + S+  YR KVE+Y+ RV++LN+VTQ+RD  +KQYDEL+K+R         LDEFM+GFN
Sbjct: 1044 LDSIAEYRSKVELYNGRVDELNSVTQERDDTRKQYDELRKRR---------LDEFMAGFN 1103

Query: 61   TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 120
            TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS
Sbjct: 1104 TISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSS 1163

Query: 121  LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 170
            LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII
Sbjct: 1164 LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 1203

[Close]

BLAST of MELO3C034516 vs. TAIR 10
Match: AT3G54670.2 (Structural maintenance of chromosomes (SMC) family protein )

HSP 1 Score: 102.4 bits (254), Expect = 4.9e-22
Identity = 55/162 (33.95%), Postives = 98/162 (60.49%), Query Frame = 0


Query: 9   RKVEVYDERVEDLNTVTQQRDAMKKQYDELKKKRQLNFSSLFKLDEFMSGFNTISLKLKE 68
           R ++ Y+   E    V+Q+ +A +K  +E +     N     + + FM  FN I+  + +
Sbjct: 238 RALDQYEAIQEKEKQVSQEFEAARK--EEKQVADAFNTVKQKRYELFMEAFNHIASNIDK 297

Query: 69  MYQMIT------LGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLA 128
           +Y+ +T      LGG A L L +  DPF  G+ ++  PP K ++++  LSGGEKT+++LA
Sbjct: 298 IYKQLTKSNTHPLGGTAYLNLENEDDPFLHGIKYTTMPPTKRFRDMEQLSGGEKTVAALA 357

Query: 129 LVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDA 165
           L+F++H Y+P+P +++DE+DAALD  NV+ V  +++ ++  A
Sbjct: 358 LLFSIHSYRPSPFFILDEVDAALDNLNVAKVAKFIRSKSCQA 397

[Close]

BLAST of MELO3C034516 vs. TAIR 10
Match: AT3G54670.3 (Structural maintenance of chromosomes (SMC) family protein )

HSP 1 Score: 102.4 bits (254), Expect = 4.9e-22
Identity = 55/162 (33.95%), Postives = 98/162 (60.49%), Query Frame = 0


Query: 9    RKVEVYDERVEDLNTVTQQRDAMKKQYDELKKKRQLNFSSLFKLDEFMSGFNTISLKLKE 68
            R ++ Y+   E    V+Q+ +A +K  +E +     N     + + FM  FN I+  + +
Sbjct: 1024 RALDQYEAIQEKEKQVSQEFEAARK--EEKQVADAFNTVKQKRYELFMEAFNHIASNIDK 1083

Query: 69   MYQMIT------LGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLA 128
            +Y+ +T      LGG A L L +  DPF  G+ ++  PP K ++++  LSGGEKT+++LA
Sbjct: 1084 IYKQLTKSNTHPLGGTAYLNLENEDDPFLHGIKYTTMPPTKRFRDMEQLSGGEKTVAALA 1143

Query: 129  LVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDA 165
            L+F++H Y+P+P +++DE+DAALD  NV+ V  +++ ++  A
Sbjct: 1144 LLFSIHSYRPSPFFILDEVDAALDNLNVAKVAKFIRSKSCQA 1183

[Close]

BLAST of MELO3C034516 vs. TAIR 10
Match: AT3G54670.1 (Structural maintenance of chromosomes (SMC) family protein )

HSP 1 Score: 95.1 bits (235), Expect = 7.8e-20
Identity = 54/162 (33.33%), Postives = 97/162 (59.88%), Query Frame = 0


Query: 9    RKVEVYDERVEDLNTVTQQRDAMKKQYDELKKKRQLNFSSLFKLDEFMSGFNTISLKLKE 68
            R ++ Y+   E    V+Q+ +A +K  +E +     N     + + FM  FN I+  + +
Sbjct: 1025 RALDQYEAIQEKEKQVSQEFEAARK--EEKQVADAFNTVKQKRYELFMEAFNHIASNIDK 1084

Query: 69   MYQMIT------LGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLA 128
            +Y+ +T      LGG A L L +  DPF  G+ ++  PP K ++++  LSGGEKT+++LA
Sbjct: 1085 IYKQLTKSNTHPLGGTAYLNLENEDDPFLHGIKYTTMPPTKRFRDMEQLSGGEKTVAALA 1144

Query: 129  LVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDA 165
            L+F++H  +P+P +++DE+DAALD  NV+ V  +++ ++  A
Sbjct: 1145 LLFSIH--RPSPFFILDEVDAALDNLNVAKVAKFIRSKSCQA 1182

The following BLAST results are available for this feature:

BLAST of MELO3C034516 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460572.1	1.7e-77	91.72	PREDICTED: LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 4 ...	[more]
XP_011655432.1	7.2e-76	89.94	structural maintenance of chromosomes protein 4 [Cucumis sativus] >KGN51909.2 hy...	[more]
XP_038876535.1	1.6e-75	89.35	structural maintenance of chromosomes protein 4 isoform X2 [Benincasa hispida]	[more]
XP_038876534.1	1.6e-75	89.35	structural maintenance of chromosomes protein 4 isoform X1 [Benincasa hispida]	[more]
XP_023538680.1	3.6e-75	89.35	structural maintenance of chromosomes protein 4 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C034516 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJL0	2.0e-73	83.43	Structural maintenance of chromosomes protein 4 OS=Arabidopsis thaliana OX=3702 ...	[more]
P50532	1.1e-58	67.66	Structural maintenance of chromosomes protein 4 OS=Xenopus laevis OX=8355 GN=smc...	[more]
Q12267	2.4e-58	69.88	Structural maintenance of chromosomes protein 4 OS=Saccharomyces cerevisiae (str...	[more]
Q9NTJ3	1.6e-57	67.07	Structural maintenance of chromosomes protein 4 OS=Homo sapiens OX=9606 GN=SMC4 ...	[more]
Q9ERA5	2.7e-57	67.07	Structural maintenance of chromosomes protein 4 (Fragment) OS=Microtus arvalis O...	[more]

BLAST of MELO3C034516 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CCB7	8.3e-78	91.72	Structural maintenance of chromosomes protein OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A0A0KSL0	3.5e-76	89.94	Structural maintenance of chromosomes protein 4 OS=Cucumis sativus OX=3659 GN=Cs...	[more]
A0A6J1GF37	6.6e-75	88.76	Structural maintenance of chromosomes protein OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1I9T1	1.5e-74	88.17	Structural maintenance of chromosomes protein OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1D9G1	5.6e-74	87.57	Structural maintenance of chromosomes protein OS=Momordica charantia OX=3673 GN=...	[more]

BLAST of MELO3C034516 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48600.1	1.5e-74	83.43	structural maintenance of chromosome 3	[more]
AT5G48600.2	1.5e-74	83.43	structural maintenance of chromosome 3	[more]
AT3G54670.2	4.9e-22	33.95	Structural maintenance of chromosomes (SMC) family protein	[more]
AT3G54670.3	4.9e-22	33.95	Structural maintenance of chromosomes (SMC) family protein	[more]
AT3G54670.1	7.8e-20	33.33	Structural maintenance of chromosomes (SMC) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 4..41
None	No IPR available	COILS	Coil	Coil	coord: 177..197
None	No IPR available	PANTHER	PTHR43939:SF1	STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 4	coord: 9..176
None	No IPR available	PANTHER	PTHR43939	FAMILY NOT NAMED	coord: 9..176
IPR003395	RecF/RecN/SMC, N-terminal	PFAM	PF02463	SMC_N	coord: 28..175 e-value: 1.1E-27 score: 96.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 14..196 e-value: 6.5E-39 score: 135.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 4..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034516.1	MELO3C034516.1	mRNA