MELO3C034432 (gene) Melon (DHL92) v4

Overview
NameMELO3C034432
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr10: 17030487 .. 17030891 (+)
RNA-Seq ExpressionMELO3C034432
SyntenyMELO3C034432
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCTGTTTGGAAAAAGGTTTTCCAGAATTTATGGTGTCTCTTGCCAGATGACACCAGAGTTCAAGAAGAAGAAAGGAAATAAACCATCAGTTGATATAGCTAAGAATTTCTCCCTCTTTGCTCGTTGTTTCTGGGAAGATAGGTGGTTGGGGGAAAGATCCTTCTACTCTGCTTTTCCTTTATATCATTTATCTTCAATGAAGAAAGTATCAGTGTCTAATGTTTTGGCTCAGCCAGTCCCTACTTGGAGTTCCACTATTCTTTATTTGCAAGGGAGACGAAGGATATTATCACTTTCCTTTCTTTGTTGCGGTGTTTCAGGGCTCTCCTGGGTGAGGGACTTTCTCTTGTGGTGCCCTAGTCCTTCTTCCTTTGTTTGGTCAACTTTCTTCCCCCAATGA

mRNA sequence

ATGGCTCTGTTTGGAAAAAGGTTTTCCAGAATTTATGGTGTCTCTTGCCAGATGACACCAGAGTTCAAGAAGAAGAAAGGAAATAAACCATCAGTTGATATAGCTAAGAATTTCTCCCTCTTTGCTCGTTGTTTCTGGGAAGATAGGTGGTTGGGGGAAAGATCCTTCTACTCTGCTTTTCCTTTATATCATTTATCTTCAATGAAGAAAGTATCAGTGTCTAATGTTTTGGCTCAGCCAGTCCCTACTTGGAGTTCCACTATTCTTTATTTGCAAGGGAGACGAAGGATATTATCACTTTCCTTTCTTTGTTGCGGTGTTTCAGGGCTCTCCTGGGTGAGGGACTTTCTCTTGTGGTGCCCTAGTCCTTCTTCCTTTGTTTGGTCAACTTTCTTCCCCCAATGA

Coding sequence (CDS)

ATGGCTCTGTTTGGAAAAAGGTTTTCCAGAATTTATGGTGTCTCTTGCCAGATGACACCAGAGTTCAAGAAGAAGAAAGGAAATAAACCATCAGTTGATATAGCTAAGAATTTCTCCCTCTTTGCTCGTTGTTTCTGGGAAGATAGGTGGTTGGGGGAAAGATCCTTCTACTCTGCTTTTCCTTTATATCATTTATCTTCAATGAAGAAAGTATCAGTGTCTAATGTTTTGGCTCAGCCAGTCCCTACTTGGAGTTCCACTATTCTTTATTTGCAAGGGAGACGAAGGATATTATCACTTTCCTTTCTTTGTTGCGGTGTTTCAGGGCTCTCCTGGGTGAGGGACTTTCTCTTGTGGTGCCCTAGTCCTTCTTCCTTTGTTTGGTCAACTTTCTTCCCCCAATGA

Protein sequence

MALFGKRFSRIYGVSCQMTPEFKKKKGNKPSVDIAKNFSLFARCFWEDRWLGERSFYSAFPLYHLSSMKKVSVSNVLAQPVPTWSSTILYLQGRRRILSLSFLCCGVSGLSWVRDFLLWCPSPSSFVWSTFFPQ
Homology
[Close]
BLAST of MELO3C034432 vs. NCBI nr
Match: XP_011655012.1 (uncharacterized protein LOC105435468 [Cucumis sativus])

HSP 1 Score: 261.2 bits (666), Expect = 5.1e-66
Identity = 124/133 (93.23%), Postives = 129/133 (96.99%), Query Frame = 0 

Query: 1   MALFGKRFSRIYGVSCQMTPEFKKKKGNKPSVDIAKNFSLFARCFWEDRWLGERSFYSAF 60
           MALFG+RFSRIYGVSCQMTPEFKKKKGNKPSVDIAKNFSLFARCF EDRWL ERSFYSAF
Sbjct: 1   MALFGERFSRIYGVSCQMTPEFKKKKGNKPSVDIAKNFSLFARCFREDRWLEERSFYSAF 60

Query: 61  PLYHLSSMKKVSVSNVLAQPVPTWSSTILYLQGRRRILSLSFLCCGVSGLSWVRDFLLWC 120
           PLY+LSSM+KVS+SNVLAQPVPTWSS ILYLQGRRRILSLSFLCCGVSGLSWVR+FLLWC
Sbjct: 61  PLYYLSSMQKVSLSNVLAQPVPTWSSAILYLQGRRRILSLSFLCCGVSGLSWVRNFLLWC 120

Query: 121 PSPSSFVWSTFFP 134
           PSPSSFVWSTF P
Sbjct: 121 PSPSSFVWSTFLP 133

[Close]
BLAST of MELO3C034432 vs. NCBI nr
Match: KAA0035930.1 (uncharacterized protein E6C27_scaffold56G001070 [Cucumis melo var. makuwa] >TYK19079.1 uncharacterized protein E5676_scaffold529G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 105.5 bits (262), Expect = 3.6e-19
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0 

Query: 1  MALFGKRFSRIYGVSCQMTPEFKKKKGNKPSVDIAKNFSLFARCFWED 49
          MALFGKRFSRIYGVSCQMTPEFKKKKGNKPSVDIAKNFSLFARCFWED
Sbjct: 1  MALFGKRFSRIYGVSCQMTPEFKKKKGNKPSVDIAKNFSLFARCFWED 48

[Close]
BLAST of MELO3C034432 vs. ExPASy TrEMBL
Match: A0A5A7SY03 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold529G00460 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.7e-19
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0 

Query: 1  MALFGKRFSRIYGVSCQMTPEFKKKKGNKPSVDIAKNFSLFARCFWED 49
          MALFGKRFSRIYGVSCQMTPEFKKKKGNKPSVDIAKNFSLFARCFWED
Sbjct: 1  MALFGKRFSRIYGVSCQMTPEFKKKKGNKPSVDIAKNFSLFARCFWED 48

The following BLAST results are available for this feature:
BLAST of MELO3C034432 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011655012.15.1e-6693.23uncharacterized protein LOC105435468 [Cucumis sativus][more]
KAA0035930.13.6e-19100.00uncharacterized protein E6C27_scaffold56G001070 [Cucumis melo var. makuwa] >TYK1... [more]
BLAST of MELO3C034432 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034432 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SY031.7e-19100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C034432 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034432.1MELO3C034432.1mRNA