MELO3C034347.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C034347.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr10: 10808572 .. 10808847 (+)
RNA-Seq ExpressionMELO3C034347.jh1
SyntenyMELO3C034347.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATTCGCTTTCACCAGCATCTCATCGACTAGACCTGGGATTCACTTCCACCAGTATCTCACTATAGACTTAGGATTCACTTTTGCCAGCGTCCCACAATTCAATCCTCGCCTAGATCTGAGATTTAATTCACCTACATCTAGCTTTCAAGTACACAACTCATTCTTGCTTAGACTTGGGATTCATTTCACCAGTATTACTCGCTTAGACTTGGGATTTAGTTCACCAGTGTCTCGTGTTAAATATGGGATTTCCACCGGTGTCTTACGATAG

mRNA sequence

ATGGGATTCGCTTTCACCAGCATCTCATCGACTAGACCTGGGATTCACTTCCACCAGTATCTCACTATAGACTTAGGATTCACTTTTGCCAGCGTCCCACAATTCAATCCTCGCCTAGATCTGAGATTTAATTCACCTACATCTAGCTTTCAAGTACACAACTCATTCTTGCTTAGACTTGGGATTCATTTCACCAGTATTACTCGCTTAGACTTGGGATTTAGTTCACCAGTGTCTCGTGTTAAATATGGGATTTCCACCGGTGTCTTACGATAG

Coding sequence (CDS)

ATGGGATTCGCTTTCACCAGCATCTCATCGACTAGACCTGGGATTCACTTCCACCAGTATCTCACTATAGACTTAGGATTCACTTTTGCCAGCGTCCCACAATTCAATCCTCGCCTAGATCTGAGATTTAATTCACCTACATCTAGCTTTCAAGTACACAACTCATTCTTGCTTAGACTTGGGATTCATTTCACCAGTATTACTCGCTTAGACTTGGGATTTAGTTCACCAGTGTCTCGTGTTAAATATGGGATTTCCACCGGTGTCTTACGATAG

Protein sequence

MGFAFTSISSTRPGIHFHQYLTIDLGFTFASVPQFNPRLDLRFNSPTSSFQVHNSFLLRLGIHFTSITRLDLGFSSPVSRVKYGISTGVLR
Homology
[Close]
BLAST of MELO3C034347.jh1 vs. NCBI nr
Match: KAA0066310.1 (hypothetical protein E6C27_scaffold21G003680 [Cucumis melo var. makuwa] >TYK00967.1 hypothetical protein E5676_scaffold602G001500 [Cucumis melo var. makuwa])

HSP 1 Score: 92.4 bits (228), Expect = 3.88e-22
Identity = 51/82 (62.20%), Postives = 58/82 (70.73%), Query Frame = 0 

Query: 1  MGFAFTSISSTRPGIHFHQYLTIDLGFTFASVPQFNPRLDLRFNSPTSSFQVHNSFLLRL 60
          +GFAFT ISS  PGIHFHQ+L I+LGFTF S+ QF P LDL F  P SS+  HNSF LR 
Sbjct: 13 LGFAFTRISSPGPGIHFHQHLEIELGFTFTSISQFIPHLDLGFTLPASSYPAHNSFSLRP 72

Query: 61 GIHFTSI--TRLDLGFSSPVSR 80
          GI FTSI   RL + F+  VSR
Sbjct: 73 GIPFTSIYPPRLGIHFTG-VSR 93

[Close]
BLAST of MELO3C034347.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VGM9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001500 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.88e-22
Identity = 51/82 (62.20%), Postives = 58/82 (70.73%), Query Frame = 0 

Query: 1  MGFAFTSISSTRPGIHFHQYLTIDLGFTFASVPQFNPRLDLRFNSPTSSFQVHNSFLLRL 60
          +GFAFT ISS  PGIHFHQ+L I+LGFTF S+ QF P LDL F  P SS+  HNSF LR 
Sbjct: 13 LGFAFTRISSPGPGIHFHQHLEIELGFTFTSISQFIPHLDLGFTLPASSYPAHNSFSLRP 72

Query: 61 GIHFTSI--TRLDLGFSSPVSR 80
          GI FTSI   RL + F+  VSR
Sbjct: 73 GIPFTSIYPPRLGIHFTG-VSR 93

The following BLAST results are available for this feature:
BLAST of MELO3C034347.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0066310.13.88e-2262.20hypothetical protein E6C27_scaffold21G003680 [Cucumis melo var. makuwa] >TYK0096... [more]
BLAST of MELO3C034347.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034347.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VGM91.88e-2262.20Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C034347.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034347.jh1.t1MELO3C034347.jh1.t1mRNA