MELO3C034340 (gene) Melon (DHL92) v4

Overview
NameMELO3C034340
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionChromosome-associated kinesin KIF4
Locationchr10: 10152556 .. 10154034 (-)
RNA-Seq ExpressionMELO3C034340
SyntenyMELO3C034340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAGCAAGCAAAGAAAGTAGAACGTAAGAGGGAATGGTGAAAAGATATTGAAAGAGGAAAAGAAAATTGGTAATACAATTAACCTTCTTTAGTCATTCTTATTTCTCTTTTCTTTTCATTTTTATCTCCATTCTAAAAACAATTAAACTTCTTTAGTCATTCTTATTTACCTTTTCTTTTTATTTTTATCTCCATTCTAAAATGATTAACCATTATTTATTTAAGCTTCCAAAAACATTTTTCATTAGCTTTAATTTAGAATTCCATAAATTGACTTGATTTTAATTTTAGTTTTTTTTCTTCTTTGAATTAATCTTCTTGAAATTTTGAAATAAAAGCTTAGTTTGATTTCATTTTGGAATTACCGTAACCAGTTCTAGATTTGTTAACTCAAATTTTTCATTATGAATATGTTTTTTGAAGTCCTAATTGAAATTTTGATTCTTTAAAAAAGAAAAATAAGAAAAAAAATTGATTTATTTGTTGAGCTAATTTGTTTTAAATAAATTTTGAATTTGCTTCAATAGGAGGTTTCTAACAAACTTGCTGCTGAGATACTCATAATTACTTATTTTATATATTGTTAGGGATATTTTCAAGGAGAAATAAAAAAGAAGATGAAAACTCTCCAGAATTAAAGACTTATTTTAACAAAGAAATTGGATATAACAAAACAAAATGTTTTTCAATGGGTATTGTAGACTTAACCTAAACCAAGTAGACTCAAACCTTTAACCTGATAGAGACCGTTAAGGAGAGACCTTGATTATCGCTTCTTGAGATATATAATATTGCTGACAATTAGTGCTTAATTAAGTTTGAGGTGCAATCATGAGTTGTTATATATCAAAAGCGCACATGCATTGAGTCTGGGTTTTTCATGAGAGAAAAATAATCTTATATTTTTTCATACATTACTTTTCAAACAATGCATTATGTTTTAGACAATAGTACTAGCCAGCTTACAATTTTTTATATTTATTTTATATATATTCTTTTAATACTGTTTCTTCAGGGTTTTCATCGCAAATGGAGGATATTAACGTTATGGCTGCTATGTCTGGTTCCACCTCTGCTCTTGTTGCTTCAGCAGATGCGACAAAAGCAGCTGCAGCAGGTAATCTTGGCGATGCAGCTGATGCCGTTTATCGTGCTGAAGCTTCTGCTTTGGCTACGAAAGCTGCATCGGAAGTTGTTGTGGCTGCTGCCCCTGGAACCCTTATGGCCAATCTCACCACTATTTCAGCTAGTCTTGCAAAAATTTCTGCTTCAGTGGCTTCTATTGCTTTAAACATTGCTTCTGCGCCCAATCCCAATCCTCATGTTGATAATGCTGTGGTTCCTAATGTCAACCAACAACGGCAACATAATTGCGGATGTGACGTTTACTGCAAAACTAGAAGATGCGACTGTCGTGGAACTGACAAACGATGCACTGACGATTGTAGTTGCTCCATTCTTCAATGTAGAAATAGATAG

mRNA sequence

GCAGCAAGCAAAGAAAGTAGAACGTAAGAGGGAATGGTGAAAAGATATTGAAAGAGGAAAAGAAAATTGGGTTTTCATCGCAAATGGAGGATATTAACGTTATGGCTGCTATGTCTGGTTCCACCTCTGCTCTTGTTGCTTCAGCAGATGCGACAAAAGCAGCTGCAGCAGGTAATCTTGGCGATGCAGCTGATGCCGTTTATCGTGCTGAAGCTTCTGCTTTGGCTACGAAAGCTGCATCGGAAGTTGTTGTGGCTGCTGCCCCTGGAACCCTTATGGCCAATCTCACCACTATTTCAGCTAGTCTTGCAAAAATTTCTGCTTCAGTGGCTTCTATTGCTTTAAACATTGCTTCTGCGCCCAATCCCAATCCTCATGTTGATAATGCTGTGGTTCCTAATGTCAACCAACAACGGCAACATAATTGCGGATGTGACGTTTACTGCAAAACTAGAAGATGCGACTGTCGTGGAACTGACAAACGATGCACTGACGATTGTAGTTGCTCCATTCTTCAATGTAGAAATAGATAG

Coding sequence (CDS)

ATGGAGGATATTAACGTTATGGCTGCTATGTCTGGTTCCACCTCTGCTCTTGTTGCTTCAGCAGATGCGACAAAAGCAGCTGCAGCAGGTAATCTTGGCGATGCAGCTGATGCCGTTTATCGTGCTGAAGCTTCTGCTTTGGCTACGAAAGCTGCATCGGAAGTTGTTGTGGCTGCTGCCCCTGGAACCCTTATGGCCAATCTCACCACTATTTCAGCTAGTCTTGCAAAAATTTCTGCTTCAGTGGCTTCTATTGCTTTAAACATTGCTTCTGCGCCCAATCCCAATCCTCATGTTGATAATGCTGTGGTTCCTAATGTCAACCAACAACGGCAACATAATTGCGGATGTGACGTTTACTGCAAAACTAGAAGATGCGACTGTCGTGGAACTGACAAACGATGCACTGACGATTGTAGTTGCTCCATTCTTCAATGTAGAAATAGATAG

Protein sequence

MEDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAAPGTLMANLTTISASLAKISASVASIALNIASAPNPNPHVDNAVVPNVNQQRQHNCGCDVYCKTRRCDCRGTDKRCTDDCSCSILQCRNR
Homology
[Close]
BLAST of MELO3C034340 vs. NCBI nr
Match: XP_008465229.1 (PREDICTED: uncharacterized protein LOC103502885 [Cucumis melo] >KAA0065697.1 Chromosome-associated kinesin KIF4 [Cucumis melo var. makuwa] >TYK14448.1 Chromosome-associated kinesin KIF4 [Cucumis melo var. makuwa])

HSP 1 Score: 269.2 bits (687), Expect = 2.1e-68
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0 

Query: 1   MEDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA 60
           MEDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA
Sbjct: 1   MEDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA 60

Query: 61  PGTLMANLTTISASLAKISASVASIALNIASAPNPNPHVDNAVVPNVNQQRQHNCGCDVY 120
           PGTLMANLTTISASLAKISASVASIALNIASAPNPNPHVDNAVVPNVNQQRQHNCGCDVY
Sbjct: 61  PGTLMANLTTISASLAKISASVASIALNIASAPNPNPHVDNAVVPNVNQQRQHNCGCDVY 120

Query: 121 CKTRRCDCRGTDKRCTDDCSCSILQCRNR 150
           CKTRRCDCRGTDKRCTDDCSCSILQCRNR
Sbjct: 121 CKTRRCDCRGTDKRCTDDCSCSILQCRNR 149

[Close]
BLAST of MELO3C034340 vs. ExPASy TrEMBL
Match: A0A5D3CTB1 (Chromosome-associated kinesin KIF4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G001100 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.0e-68
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0 

Query: 1   MEDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA 60
           MEDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA
Sbjct: 1   MEDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA 60

Query: 61  PGTLMANLTTISASLAKISASVASIALNIASAPNPNPHVDNAVVPNVNQQRQHNCGCDVY 120
           PGTLMANLTTISASLAKISASVASIALNIASAPNPNPHVDNAVVPNVNQQRQHNCGCDVY
Sbjct: 61  PGTLMANLTTISASLAKISASVASIALNIASAPNPNPHVDNAVVPNVNQQRQHNCGCDVY 120

Query: 121 CKTRRCDCRGTDKRCTDDCSCSILQCRNR 150
           CKTRRCDCRGTDKRCTDDCSCSILQCRNR
Sbjct: 121 CKTRRCDCRGTDKRCTDDCSCSILQCRNR 149

[Close]
BLAST of MELO3C034340 vs. ExPASy TrEMBL
Match: A0A1S3CNA8 (uncharacterized protein LOC103502885 OS=Cucumis melo OX=3656 GN=LOC103502885 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.0e-68
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0 

Query: 1   MEDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA 60
           MEDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA
Sbjct: 1   MEDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA 60

Query: 61  PGTLMANLTTISASLAKISASVASIALNIASAPNPNPHVDNAVVPNVNQQRQHNCGCDVY 120
           PGTLMANLTTISASLAKISASVASIALNIASAPNPNPHVDNAVVPNVNQQRQHNCGCDVY
Sbjct: 61  PGTLMANLTTISASLAKISASVASIALNIASAPNPNPHVDNAVVPNVNQQRQHNCGCDVY 120

Query: 121 CKTRRCDCRGTDKRCTDDCSCSILQCRNR 150
           CKTRRCDCRGTDKRCTDDCSCSILQCRNR
Sbjct: 121 CKTRRCDCRGTDKRCTDDCSCSILQCRNR 149

The following BLAST results are available for this feature:
BLAST of MELO3C034340 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008465229.12.1e-68100.00PREDICTED: uncharacterized protein LOC103502885 [Cucumis melo] >KAA0065697.1 Chr... [more]
BLAST of MELO3C034340 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034340 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CTB11.0e-68100.00Chromosome-associated kinesin KIF4 OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3CNA81.0e-68100.00uncharacterized protein LOC103502885 OS=Cucumis melo OX=3656 GN=LOC103502885 PE=... [more]
BLAST of MELO3C034340 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034340.1MELO3C034340.1mRNA