MELO3C034331 (gene) Melon (DHL92) v4

Overview
NameMELO3C034331
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionGag-protease polyprotein
Locationchr10: 9099587 .. 9101860 (+)
RNA-Seq ExpressionMELO3C034331
SyntenyMELO3C034331
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAATAATATAAGCATTGTTTGGATGACACTACTCATTCCATATAACAATATAAATTCACCTAACTAGAAAGAATTAAATTAGATCATCAAGTCCCATCTAATATTCCTTCCTTTTTCTTTAATTTGAATTTTTATGATCTTATCAGGCTACAAGGTATTTGTAACGCCCCAAATTTTTAAGGTATGTTCTCAACATATTTATCTTATGTTATGGAAATTTTATTTATTTTGTTAAGTGTTAAATTCTTTTGGGTTGGTGAGAACAAGGAAAAGAAAAGGCAAAAGAAAATATTTTGGGATAAAATGAAATAATATAATTATATTAATATTATTTAAAAAAACCGTTGCATGTGCAGCCCTCTATCGCCTTCTTCTTCTTCTTCATCGTGCGTAACCAGCCGCCAGCGTTCTCTCTCACGCCAACAGCCTCTTTCGTCTCCGTTCAACACCAACGTCACCGTATCTCTTCCTAGGTTGTCACCGTCAGCTTCACAACTCCGTCGGGCACCCTTTCGCAACCGCCGCCCGAACCCCTTTCTCCTTCTTATTGTTCCGTCGACCGCCATCGTCTCTATCCTCCTCCGTTCATCGATTTCAAGGCCCGACCGCTCGCTGTCATGACACATCCTCCATCCATCGAAGATGTCAAGATAGGAAGTCGTGGTTTCATCCTTTGCCCGAGCTGAGATCCTTCTTCGTTAGAGCCACCCGGTTGCCTCCCTTAGCCTGTGCGCCGAGCTGTCGTCCAAGCCAAGCCGCCAACCAACTTCCCCTTTCTTGCAGCCACTCGAGCCAGTTTGTGGTAAGATTGAAATTATGAGTTTTATAGTGTTTTCCCTAGTTCATTTAAGTATAGTAGTTGAAATAAAATATCGGATTAATTGGGTTCATTATCATGGTTTTCTTGAAGGTTTGGAAGTCGAATTCGTGGATTCTACGACGAACTTGTTTGGAGTTTGATTTTCCATTAGCTTGGGTAAGTGGTGGATCTTGTGAATTGGGAAATTTGATTGGACAACTTGCTTGATGTAGTATTGAAATTCCTTATGTTATGTTTAGGTTGGTTCATTGGATCTTAGTTTGGTTAAGGAGCATAGCCAAATCTAAGGTAAGGGTTCCTACTACAGGACTCAAATTCGAGATTTAAACATAATAAATTAAGCAAAAGTATATTTTTGAGGTTGCAATAAATTGATGTTTGTGTGCTCACATAAAAGTAGTATTGATACATTCTTGACTGGTTTTGAACGACACAATTGCTAAGTGTAGTTTGATTTACATCGATGGGTCGTGTTGTTGGCTTATTATTGATGACGAGGAATTGACTGTTATTCATGACTTGGGTTATAGTTGGTCTGTGCTGTCATTGGCTGGTGTTATCTGGGTCCTCTTTGTAATCTATGCATACTGTTGAGCTGTGTTGTTCATGGGTGATGGATTTCAGAACCGCCATGCGTAGTTTGTATATTTACTGATGGGTTGTACTCTAAACTAAATTAGACGTTATGTTTAGTATAGGTTACTTGTAGTTTGTGTTAGTGTTTGGGCTGAGGCAATGTGATTGCCAGTGTAACTACACGATGATGAGTTGACTTACTGATTGAACTTAAATTGCCTGACTGATTATACTTAGAGACTGGACTGTTAATTGAGATTGTTACGTTTTCATTGTTGTAGGCTGTTTAGACTGGATTGAGGAATAACTGTTAGCTTTATCTATGGGGTAATGTACCTTGCAGGCACGGTGTCCTATAGGATCACCACATGTTGTGCATCCTTCGGGATCACTAGACTAATGTGTATATCCAACGGGAACACTAGACTGATATGTATATCCGACGGGATTACTAGATTGATATGTGTGTCCTTCGAGATTACTAGACTGATTGATGTGTGCGTCTTACGATACCACAAGACTGTTCTGTGCAGGGTACCCATTAATAAGAAGCTAATGGCTATTGCCTTATCGAGGCCAGTAGTGAGTCTCTTACTGAGTATATTTCATACTCACCCTTTTATGTTTAACTTTTTTTTTTTTTTCAGATAAAGGTAATGTACGAGGCTGACCGACGAGGGGCAAGAAGGATACGTGAAGGCCATATGGAGATGTTTAGGTTAATGCTTCCGCTCAATGTCTTTATTGTTCCGTTTGAGGATTTTTGTCTTGAGTTTTGGTTAGAAACTTTGTTCATTTATTTTATTTGAAATTCTATAAACGGCGTTTGAAACTTTTAAAATTTATTTGAAATAGGGCCCGAAGAAAATTTTATTACA

mRNA sequence

TAATAATATAAGCATTGTTTGGATGACACTACTCATTCCATATAACAATATAAATTCACCTAACTAGAAAGAATTAAATTAGATCATCAAGTCCCATCTAATATTCCTTCCTTTTTCTTTAATTTGAATTTTTATGATCTTATCAGGCTACAAGGTATTTGTAACGCCCCAAATTTTTAAGCCCTCTATCGCCTTCTTCTTCTTCTTCATCGTGCGTAACCAGCCGCCAGCGTTCTCTCTCACGCCAACAGCCTCTTTCGTCTCCGTTCAACACCAACGTCACCGTATCTCTTCCTAGGTTGTCACCGTCAGCTTCACAACTCCGTCGGGCACCCTTTCGCAACCGCCGCCCGAACCCCTTTCTCCTTCTTATTGTTCCGTCGACCGCCATCGTCTCTATCCTCCTCCGTTCATCGATTTCAAGGCCCGACCGCTCGCTGTCATGACACATCCTCCATCCATCGAAGATGTCAAGATAGGAAGTCGTGGTTTCATCCTTTGCCCGAGCTGAGATCCTTCTTCGTTAGAGCCACCCGGTTGCCTCCCTTAGCCTGTGCGCCGAGCTGTCGTCCAAGCCAAGCCGCCAACCAACTTCCCCTTTCTTGCAGCCACTCGAGCCAGTTTGTGGTTTGGAAGTCGAATTCGTGGATTCTACGACGAACTTGTTTGGAGTTTGATTTTCCATTAGCTTGGGTTGGTTCATTGGATCTTAGTTTGGTTAAGGAGCATAGCCAAATCTAAGATAAAGGTAATGTACGAGGCTGACCGACGAGGGGCAAGAAGGATACGTGAAGGCCATATGGAGATGTTTAGGTTAATGCTTCCGCTCAATGTCTTTATTGTTCCGTTTGAGGATTTTTGTCTTGAGTTTTGGTTAGAAACTTTGTTCATTTATTTTATTTGAAATTCTATAAACGGCGTTTGAAACTTTTAAAATTTATTTGAAATAGGGCCCGAAGAAAATTTTATTACA

Coding sequence (CDS)

ATGATCTTATCAGGCTACAAGGTATTTGTAACGCCCCAAATTTTTAAGCCCTCTATCGCCTTCTTCTTCTTCTTCATCGTGCGTAACCAGCCGCCAGCGTTCTCTCTCACGCCAACAGCCTCTTTCGTCTCCGTTCAACACCAACGTCACCGTATCTCTTCCTAG

Protein sequence

MILSGYKVFVTPQIFKPSIAFFFFFIVRNQPPAFSLTPTASFVSVQHQRHRISS
Homology
[Close]
BLAST of MELO3C034331 vs. NCBI nr
Match: KAA0037406.1 (gag-protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 72.0 bits (175), Expect = 1.8e-09
Identity = 39/48 (81.25%), Postives = 39/48 (81.25%), Query Frame = 0 

Query: 1  MILSGYKVFVTPQIFKPSIAFFFFFIVRNQPPAFSLTPTASFVSVQHQ 49
          MILSGY         KPSIAFFFFFIVRNQPPAFSLTPTASFVSVQHQ
Sbjct: 1  MILSGY---------KPSIAFFFFFIVRNQPPAFSLTPTASFVSVQHQ 39

[Close]
BLAST of MELO3C034331 vs. NCBI nr
Match: TYJ97506.1 (gag-protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 72.0 bits (175), Expect = 1.8e-09
Identity = 39/48 (81.25%), Postives = 39/48 (81.25%), Query Frame = 0 

Query: 1  MILSGYKVFVTPQIFKPSIAFFFFFIVRNQPPAFSLTPTASFVSVQHQ 49
          MILSGY         KPSIAFFFFFIVRNQPPAFSLTPTASFVSVQHQ
Sbjct: 1  MILSGY---------KPSIAFFFFFIVRNQPPAFSLTPTASFVSVQHQ 39

[Close]
BLAST of MELO3C034331 vs. ExPASy TrEMBL
Match: A0A5A7T5I3 (Gag-protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold278G001180 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 8.5e-10
Identity = 39/48 (81.25%), Postives = 39/48 (81.25%), Query Frame = 0 

Query: 1  MILSGYKVFVTPQIFKPSIAFFFFFIVRNQPPAFSLTPTASFVSVQHQ 49
          MILSGY         KPSIAFFFFFIVRNQPPAFSLTPTASFVSVQHQ
Sbjct: 1  MILSGY---------KPSIAFFFFFIVRNQPPAFSLTPTASFVSVQHQ 39

[Close]
BLAST of MELO3C034331 vs. ExPASy TrEMBL
Match: A0A5D3BEN2 (Gag-protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00110 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 8.5e-10
Identity = 39/48 (81.25%), Postives = 39/48 (81.25%), Query Frame = 0 

Query: 1  MILSGYKVFVTPQIFKPSIAFFFFFIVRNQPPAFSLTPTASFVSVQHQ 49
          MILSGY         KPSIAFFFFFIVRNQPPAFSLTPTASFVSVQHQ
Sbjct: 1  MILSGY---------KPSIAFFFFFIVRNQPPAFSLTPTASFVSVQHQ 39

The following BLAST results are available for this feature:
BLAST of MELO3C034331 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0037406.11.8e-0981.25gag-protease polyprotein [Cucumis melo var. makuwa][more]
TYJ97506.11.8e-0981.25gag-protease polyprotein [Cucumis melo var. makuwa][more]
BLAST of MELO3C034331 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034331 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T5I38.5e-1081.25Gag-protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... [more]
A0A5D3BEN28.5e-1081.25Gag-protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
BLAST of MELO3C034331 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034331.1MELO3C034331.1mRNA