MELO3C034270 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034270
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	L10-interacting MYB domain-containing protein-like
Location	chr10: 6849014 .. 6849346 (-)
RNA-Seq Expression	MELO3C034270
Synteny	MELO3C034270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAATAAGAGAGCTAAAAAGTTTAGACAAAGTGGTTGCCCACATTATGAAAAGCTCGTAAAGATTTTTGGAGATACTACTACAACAGGTGTAAATGCTTGCCCATCAACAAGACTTATTTCAGATTCTGAAGATGAAAATGGAAATGATGTTGCAAGCAACACAAACGTTGGTGTTGAAGAGAATGATAAAGGAAAAGGCAAAAAACGAGTTCGAAGAAAGAAAGACGAATTTGGCAGTTTCTTCTCATCATTCTTAGATGTATATGCGGAGAATGCAAAGAGAAAGAATGACATCCTTGAGAAAAGATCTTTTGGTGTACATCGAGTCAAG

mRNA sequence

GTGAATAAGAGAGCTAAAAAGTTTAGACAAAGTGGTTGCCCACATTATGAAAAGCTCGTAAAGATTTTTGGAGATACTACTACAACAGGTGTAAATGCTTGCCCATCAACAAGACTTATTTCAGATTCTGAAGATGAAAATGGAAATGATGTTGCAAGCAACACAAACGTTGGTGTTGAAGAGAATGATAAAGGAAAAGGCAAAAAACGAGTTCGAAGAAAGAAAGACGAATTTGGCAGTTTCTTCTCATCATTCTTAGATGTATATGCGGAGAATGCAAAGAGAAAGAATGACATCCTTGAGAAAAGATCTTTTGGTGTACATCGAGTCAAG

Coding sequence (CDS)

GTGAATAAGAGAGCTAAAAAGTTTAGACAAAGTGGTTGCCCACATTATGAAAAGCTCGTAAAGATTTTTGGAGATACTACTACAACAGGTGTAAATGCTTGCCCATCAACAAGACTTATTTCAGATTCTGAAGATGAAAATGGAAATGATGTTGCAAGCAACACAAACGTTGGTGTTGAAGAGAATGATAAAGGAAAAGGCAAAAAACGAGTTCGAAGAAAGAAAGACGAATTTGGCAGTTTCTTCTCATCATTCTTAGATGTATATGCGGAGAATGCAAAGAGAAAGAATGACATCCTTGAGAAAAGATCTTTTGGTGTACATCGAGTCAAG

Protein sequence

VNKRAKKFRQSGCPHYEKLVKIFGDTTTTGVNACPSTRLISDSEDENGNDVASNTNVGVEENDKGKGKKRVRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGVHRVK

Homology

[Close]

BLAST of MELO3C034270 vs. NCBI nr
Match: TYJ96795.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >TYK00864.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >TYK19200.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 198.4 bits (503), Expect = 3.3e-47
Identity = 99/106 (93.40%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 1   VNKRAKKFRQSGCPHYEKLVKIFGDTTTTGVNACPSTRLISDSEDENGNDVASNTNVGVE 60
           VNKRAKKFR+SGCPHYEKLV+IFGDTT TGVNACPSTRLISDSEDEN NDVASNTNVGVE
Sbjct: 26  VNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVASNTNVGVE 85

Query: 61  ENDKGKGKKRVRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFG 107
           EN+KGK KKR RRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFG
Sbjct: 86  ENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFG 131

[Close]

BLAST of MELO3C034270 vs. NCBI nr
Match: TYK21097.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 198.4 bits (503), Expect = 3.3e-47
Identity = 99/106 (93.40%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 1   VNKRAKKFRQSGCPHYEKLVKIFGDTTTTGVNACPSTRLISDSEDENGNDVASNTNVGVE 60
           VNKRAKKFR+SGCPHYEKLV+IFGDTT TGVNACPSTRLISDSEDEN NDVASNTNVGVE
Sbjct: 98  VNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVASNTNVGVE 157

Query: 61  ENDKGKGKKRVRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFG 107
           EN+KGK KKR RRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFG
Sbjct: 158 ENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFG 203

[Close]

BLAST of MELO3C034270 vs. NCBI nr
Match: TYK06268.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 198.4 bits (503), Expect = 3.3e-47
Identity = 99/106 (93.40%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 1   VNKRAKKFRQSGCPHYEKLVKIFGDTTTTGVNACPSTRLISDSEDENGNDVASNTNVGVE 60
           VNKRAKKFR+SGCPHYEKLV+IFGDTT TGVNACPSTRLISDSEDEN NDVASNTNVGVE
Sbjct: 26  VNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVASNTNVGVE 85

Query: 61  ENDKGKGKKRVRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFG 107
           EN+KGK KKR RRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFG
Sbjct: 86  ENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFG 131

[Close]

BLAST of MELO3C034270 vs. NCBI nr
Match: XP_008466944.1 (PREDICTED: uncharacterized protein LOC103504323 [Cucumis melo])

HSP 1 Score: 198.0 bits (502), Expect = 4.4e-47
Identity = 98/106 (92.45%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 1   VNKRAKKFRQSGCPHYEKLVKIFGDTTTTGVNACPSTRLISDSEDENGNDVASNTNVGVE 60
           VNKRAKKFR+SGCPHYEKL++IFGDTT TGVNACPSTRLISDSEDEN NDVASNTNVGVE
Sbjct: 64  VNKRAKKFRKSGCPHYEKLIRIFGDTTATGVNACPSTRLISDSEDENENDVASNTNVGVE 123

Query: 61  ENDKGKGKKRVRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFG 107
           EN+KGK KKR RRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFG
Sbjct: 124 ENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFG 169

[Close]

BLAST of MELO3C034270 vs. NCBI nr
Match: KAA0053615.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 196.8 bits (499), Expect = 9.7e-47
Identity = 99/110 (90.00%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   VNKRAKKFRQSGCPHYEKLVKIFGDTTTTGVNACPSTRLISDSEDENGNDVASNTNVGVE 60
           VNKRAKKFR+SGCPHYEKLV+IFGDTT TGVNACPSTRLISDSEDEN NDVASNTNVGVE
Sbjct: 26  VNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVASNTNVGVE 85

Query: 61  ENDKGKGKKRVRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGVHRV 111
           EN+KGK KKR RRKKDEF SFFSSFLDVYAENAKRKNDILEKRSFG  +V
Sbjct: 86  ENNKGKSKKRFRRKKDEFDSFFSSFLDVYAENAKRKNDILEKRSFGCSQV 135

[Close]

BLAST of MELO3C034270 vs. ExPASy TrEMBL
Match: A0A5D3BNQ5 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00100 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.6e-47
Identity = 99/106 (93.40%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 1   VNKRAKKFRQSGCPHYEKLVKIFGDTTTTGVNACPSTRLISDSEDENGNDVASNTNVGVE 60
           VNKRAKKFR+SGCPHYEKLV+IFGDTT TGVNACPSTRLISDSEDEN NDVASNTNVGVE
Sbjct: 26  VNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVASNTNVGVE 85

Query: 61  ENDKGKGKKRVRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFG 107
           EN+KGK KKR RRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFG
Sbjct: 86  ENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFG 131

[Close]

BLAST of MELO3C034270 vs. ExPASy TrEMBL
Match: A0A5D3DBS2 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00630 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.6e-47
Identity = 99/106 (93.40%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 1   VNKRAKKFRQSGCPHYEKLVKIFGDTTTTGVNACPSTRLISDSEDENGNDVASNTNVGVE 60
           VNKRAKKFR+SGCPHYEKLV+IFGDTT TGVNACPSTRLISDSEDEN NDVASNTNVGVE
Sbjct: 98  VNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVASNTNVGVE 157

Query: 61  ENDKGKGKKRVRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFG 107
           EN+KGK KKR RRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFG
Sbjct: 158 ENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFG 203

[Close]

BLAST of MELO3C034270 vs. ExPASy TrEMBL
Match: A0A5D3C535 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00490 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.6e-47
Identity = 99/106 (93.40%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 1   VNKRAKKFRQSGCPHYEKLVKIFGDTTTTGVNACPSTRLISDSEDENGNDVASNTNVGVE 60
           VNKRAKKFR+SGCPHYEKLV+IFGDTT TGVNACPSTRLISDSEDEN NDVASNTNVGVE
Sbjct: 26  VNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVASNTNVGVE 85

Query: 61  ENDKGKGKKRVRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFG 107
           EN+KGK KKR RRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFG
Sbjct: 86  ENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFG 131

[Close]

BLAST of MELO3C034270 vs. ExPASy TrEMBL
Match: A0A1S3CTN1 (uncharacterized protein LOC103504323 OS=Cucumis melo OX=3656 GN=LOC103504323 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.1e-47
Identity = 98/106 (92.45%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 1   VNKRAKKFRQSGCPHYEKLVKIFGDTTTTGVNACPSTRLISDSEDENGNDVASNTNVGVE 60
           VNKRAKKFR+SGCPHYEKL++IFGDTT TGVNACPSTRLISDSEDEN NDVASNTNVGVE
Sbjct: 64  VNKRAKKFRKSGCPHYEKLIRIFGDTTATGVNACPSTRLISDSEDENENDVASNTNVGVE 123

Query: 61  ENDKGKGKKRVRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFG 107
           EN+KGK KKR RRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFG
Sbjct: 124 ENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFG 169

[Close]

BLAST of MELO3C034270 vs. ExPASy TrEMBL
Match: A0A5A7UIT7 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G001920 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 4.7e-47
Identity = 99/110 (90.00%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   VNKRAKKFRQSGCPHYEKLVKIFGDTTTTGVNACPSTRLISDSEDENGNDVASNTNVGVE 60
           VNKRAKKFR+SGCPHYEKLV+IFGDTT TGVNACPSTRLISDSEDEN NDVASNTNVGVE
Sbjct: 26  VNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVASNTNVGVE 85

Query: 61  ENDKGKGKKRVRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGVHRV 111
           EN+KGK KKR RRKKDEF SFFSSFLDVYAENAKRKNDILEKRSFG  +V
Sbjct: 86  ENNKGKSKKRFRRKKDEFDSFFSSFLDVYAENAKRKNDILEKRSFGCSQV 135

The following BLAST results are available for this feature:

BLAST of MELO3C034270 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ96795.1	3.3e-47	93.40	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >T...	[more]
TYK21097.1	3.3e-47	93.40	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]	[more]
TYK06268.1	3.3e-47	93.40	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]	[more]
XP_008466944.1	4.4e-47	92.45	PREDICTED: uncharacterized protein LOC103504323 [Cucumis melo]	[more]
KAA0053615.1	9.7e-47	90.00	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C034270 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C034270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BNQ5	1.6e-47	93.40	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A5D3DBS2	1.6e-47	93.40	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A5D3C535	1.6e-47	93.40	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3CTN1	2.1e-47	92.45	uncharacterized protein LOC103504323 OS=Cucumis melo OX=3656 GN=LOC103504323 PE=...	[more]
A0A5A7UIT7	4.7e-47	90.00	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]

BLAST of MELO3C034270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034270.1	MELO3C034270.1	mRNA