MELO3C034255 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034255
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	CACTA en-spm transposon protein
Location	chr11: 11643899 .. 11644455 (+)
RNA-Seq Expression	MELO3C034255
Synteny	MELO3C034255

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTATTTATGTCTTAGGGACTTAAATAATGGACAATGGTTAGATGAAACTTAGGAATAAGTTTTCCCTTGAGTATAGAGAGGGAGTGACCCAATTTTTAGAATTTGCCAAGTTTCATGTTGATGCCTATAGACGAATAAGGTGTCCATACAAGAGATGTATGAACTTAAGTTGGAACTCACTAGAGGGTGTGGAACGACATCAACTGACTATTGGAATATCCCCCTACTACACATAATGGGTGTATCATGGAGAGTCATTAAGCTTTAGAGGTACAAAAAACTTTGAGAAAGGAACTAGTAGTAACCCTTTTGATGAAGGAACTAGTAGTAGGAAGTGTAATGAAGAAGATGATATGTTGGTATGCTGAATGATTGACAAGCCCCAATTGAACAAGAAGACAAAATGGAGGAATGTTGTTTGGAAGATGAAATGCTGAGGAATATTGGGGTAGATATAAATGAAGATACAACAAATATATTTCAGGACTTATTGAATGAAGCACGTAATGAGTTGTACCCCGATTGTTTTAAATTTTCGTCCTTGAACTTTTTAATTA

mRNA sequence

CTATTTATGTCTTAGGGACTTAAATAATGGACAATGGTTAGATGAAACTTAGGAATAAGTTTTCCCTTGAGTATAGAGAGGGAGTGACCCAATTTTTAGAATTTGCCAAGTTTCATGTTGATGCCTATAGACGAATAAGGTGTCCATACAAGAGATGTATGAACTTAAGTTGGAACTCACTAGAGGGTGTGGAACGACATCAACTGACTATTGGAATATCCCCCTACTACACATAATGGGTGTATCATGGAGAGTCATTAAGCTTTAGAGGTACAAAAAACTTTGAGAAAGGAACTAGTAGTAACCCTTTTGATGAAGGAACTAGTAGTAGGAAGTGTAATGAAGAAGATGATATGTTGGTATGCTGAATGATTGACAAGCCCCAATTGAACAAGAAGACAAAATGGAGGAATGTTGTTTGGAAGATGAAATGCTGAGGAATATTGGGGTAGATATAAATGAAGATACAACAAATATATTTCAGGACTTATTGAATGAAGCACGTAATGAGTTGTACCCCGATTGTTTTAAATTTTCGTCCTTGAACTTTTTAATTA

Coding sequence (CDS)

ATGAAACTTAGGAATAAGTTTTCCCTTGAGTATAGAGAGGGAGTGACCCAATTTTTAGAATTTGCCAAGTTTCATGTTGATGCCTATAGACGAATAAGGTGTCCATACAAGAGATGTATGAACTTAAGTTGGAACTCACTAGAGGGTGTGGAACGACATCAACTGACTATTGGAATATCCCCCTACTACACATAA

Protein sequence

MKLRNKFSLEYREGVTQFLEFAKFHVDAYRRIRCPYKRCMNLSWNSLEGVERHQLTIGISPYYT

Homology

[Close]

BLAST of MELO3C034255 vs. NCBI nr
Match: KAA0040340.1 (hypothetical protein E6C27_scaffold460G00450 [Cucumis melo var. makuwa])

HSP 1 Score: 122.1 bits (305), Expect = 1.8e-24
Identity = 55/64 (85.94%), Postives = 60/64 (93.75%), Query Frame = 0


Query: 1  MKLRNKFSLEYREGVTQFLEFAKFHVDAYRRIRCPYKRCMNLSWNSLEGVERHQLTIGIS 60
          MKLRNKFSLEYR GVTQFLEFAKF+VDAY R+RCP KRC+NL+W+SLEGVERH LTIGIS
Sbjct: 6  MKLRNKFSLEYRHGVTQFLEFAKFYVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGIS 65

Query: 61 PYYT 65
          PYYT
Sbjct: 66 PYYT 69

[Close]

BLAST of MELO3C034255 vs. NCBI nr
Match: TYK16353.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 122.1 bits (305), Expect = 1.8e-24
Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 1  MKLRNKFSLEYREGVTQFLEFAKFHVDAYRRIRCPYKRCMNLSWNSLEGVERHQLTIGIS 60
          MKLRNK SLEYR GVTQFLEFAKFHVDAY R+RCP KRC+NL+W+SLEGVERH LTIGIS
Sbjct: 6  MKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGIS 65

Query: 61 PYYT 65
          PYYT
Sbjct: 66 PYYT 69

[Close]

BLAST of MELO3C034255 vs. NCBI nr
Match: TYJ95864.1 (uncharacterized protein E5676_scaffold110G001580 [Cucumis melo var. makuwa])

HSP 1 Score: 122.1 bits (305), Expect = 1.8e-24
Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 1   MKLRNKFSLEYREGVTQFLEFAKFHVDAYRRIRCPYKRCMNLSWNSLEGVERHQLTIGIS 60
           MKLRNK SLEYR GVTQFLEFAKFHVDAY R+RCP KRC+NL+W+SLEGVERH LTIGIS
Sbjct: 57  MKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGIS 116

Query: 61  PYYT 65
           PYYT
Sbjct: 117 PYYT 120

[Close]

BLAST of MELO3C034255 vs. NCBI nr
Match: TYK28867.1 (uncharacterized protein E5676_scaffold381G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 122.1 bits (305), Expect = 1.8e-24
Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 1   MKLRNKFSLEYREGVTQFLEFAKFHVDAYRRIRCPYKRCMNLSWNSLEGVERHQLTIGIS 60
           MKLRNK SLEYR GVTQFLEFAKFHVDAY R+RCP KRC+NL+W+SLEGVERH LTIGIS
Sbjct: 135 MKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGIS 194

Query: 61  PYYT 65
           PYYT
Sbjct: 195 PYYT 198

[Close]

BLAST of MELO3C034255 vs. NCBI nr
Match: TYJ99928.1 (uncharacterized protein E5676_scaffold701G00540 [Cucumis melo var. makuwa])

HSP 1 Score: 122.1 bits (305), Expect = 1.8e-24
Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 1   MKLRNKFSLEYREGVTQFLEFAKFHVDAYRRIRCPYKRCMNLSWNSLEGVERHQLTIGIS 60
           MKLRNK SLEYR GVTQFLEFAKFHVDAY R+RCP KRC+NL+W+SLEGVERH LTIGIS
Sbjct: 63  MKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGIS 122

Query: 61  PYYT 65
           PYYT
Sbjct: 123 PYYT 126

[Close]

BLAST of MELO3C034255 vs. ExPASy TrEMBL
Match: A0A5D3BP89 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00540 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 8.5e-25
Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 1   MKLRNKFSLEYREGVTQFLEFAKFHVDAYRRIRCPYKRCMNLSWNSLEGVERHQLTIGIS 60
           MKLRNK SLEYR GVTQFLEFAKFHVDAY R+RCP KRC+NL+W+SLEGVERH LTIGIS
Sbjct: 63  MKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGIS 122

Query: 61  PYYT 65
           PYYT
Sbjct: 123 PYYT 126

[Close]

BLAST of MELO3C034255 vs. ExPASy TrEMBL
Match: A0A5D3CWU5 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001370 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 8.5e-25
Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 1  MKLRNKFSLEYREGVTQFLEFAKFHVDAYRRIRCPYKRCMNLSWNSLEGVERHQLTIGIS 60
          MKLRNK SLEYR GVTQFLEFAKFHVDAY R+RCP KRC+NL+W+SLEGVERH LTIGIS
Sbjct: 6  MKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGIS 65

Query: 61 PYYT 65
          PYYT
Sbjct: 66 PYYT 69

[Close]

BLAST of MELO3C034255 vs. ExPASy TrEMBL
Match: A0A5D3BA83 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001580 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 8.5e-25
Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 1   MKLRNKFSLEYREGVTQFLEFAKFHVDAYRRIRCPYKRCMNLSWNSLEGVERHQLTIGIS 60
           MKLRNK SLEYR GVTQFLEFAKFHVDAY R+RCP KRC+NL+W+SLEGVERH LTIGIS
Sbjct: 57  MKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGIS 116

Query: 61  PYYT 65
           PYYT
Sbjct: 117 PYYT 120

[Close]

BLAST of MELO3C034255 vs. ExPASy TrEMBL
Match: A0A5A7TAJ7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold460G00450 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 8.5e-25
Identity = 55/64 (85.94%), Postives = 60/64 (93.75%), Query Frame = 0


Query: 1  MKLRNKFSLEYREGVTQFLEFAKFHVDAYRRIRCPYKRCMNLSWNSLEGVERHQLTIGIS 60
          MKLRNKFSLEYR GVTQFLEFAKF+VDAY R+RCP KRC+NL+W+SLEGVERH LTIGIS
Sbjct: 6  MKLRNKFSLEYRHGVTQFLEFAKFYVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGIS 65

Query: 61 PYYT 65
          PYYT
Sbjct: 66 PYYT 69

[Close]

BLAST of MELO3C034255 vs. ExPASy TrEMBL
Match: A0A5D3DY98 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold381G00070 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 8.5e-25
Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 1   MKLRNKFSLEYREGVTQFLEFAKFHVDAYRRIRCPYKRCMNLSWNSLEGVERHQLTIGIS 60
           MKLRNK SLEYR GVTQFLEFAKFHVDAY R+RCP KRC+NL+W+SLEGVERH LTIGIS
Sbjct: 135 MKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGIS 194

Query: 61  PYYT 65
           PYYT
Sbjct: 195 PYYT 198

The following BLAST results are available for this feature:

BLAST of MELO3C034255 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0040340.1	1.8e-24	85.94	hypothetical protein E6C27_scaffold460G00450 [Cucumis melo var. makuwa]	[more]
TYK16353.1	1.8e-24	85.94	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYJ95864.1	1.8e-24	85.94	uncharacterized protein E5676_scaffold110G001580 [Cucumis melo var. makuwa]	[more]
TYK28867.1	1.8e-24	85.94	uncharacterized protein E5676_scaffold381G00070 [Cucumis melo var. makuwa]	[more]
TYJ99928.1	1.8e-24	85.94	uncharacterized protein E5676_scaffold701G00540 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C034255 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C034255 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BP89	8.5e-25	85.94	Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3CWU5	8.5e-25	85.94	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3BA83	8.5e-25	85.94	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TAJ7	8.5e-25	85.94	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DY98	8.5e-25	85.94	Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of MELO3C034255 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029480	Transposase-associated domain	PFAM	PF13963	Transpos_assoc	coord: 1..64 e-value: 7.6E-12 score: 45.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034255.1	MELO3C034255.1	mRNA