MELO3C034231 (gene) Melon (DHL92) v4

Overview
NameMELO3C034231
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionGATA zinc finger domain-containing protein 10-like isoform X2
Locationchr10: 17757667 .. 17758031 (-)
RNA-Seq ExpressionMELO3C034231
SyntenyMELO3C034231
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGGTACATGGAGGAGTATGTACGATCTACCTATTGTACCTCCACCAGTTCATAGGGGACGTGTTCGAGTGGAAGAAGCTAAACTCGATGAAGTTTACCATAATGTAGAAGAAGTGCCTCCTGCAAACACAGAGCCAAATTGGTTATGGTAGTCCGATGACGATGATACCAACATTTGGAACAGGATATTGTGATTCTGAGGTCGGTACAAGATATTATGATGCAAGGGTCGGTCCATCGTCTTCATACATGGATGTCGGTCCATCGACTTCTTACATGCATGGACACAAACGTGGCTATGGGAAACATAACAAATATTTGTATCATGTGTATCATGAAGCACCTGTAGAGGTATAGATCGACAA

mRNA sequence

GAGGTACATGGAGGAGTATGTACGATCTACCTATTGTACCTCCACCAGTTCATAGGGGACGTGTTCGAGTGGAAGAAGCTAAACTCGATGAAGTTTACCATAATGTAGAAGAAGTGCCTCCTGCAAACACAGAGCCAAATTGGTTATGGTAGTCCGATGACGATGATACCAACATTTGGAACAGGATATTGTGATTCTGAGGTCGGTACAAGATATTATGATGCAAGGGTCGGTCCATCGTCTTCATACATGCATGGACACAAACGTGGCTATGGGAAACATAACAAATATTTGTATCATGTGTATCATGAAGCACCTGTAGAGGTATAGATCGACAA

Coding sequence (CDS)

ATGACGATGATACCAACATTTGGAACAGGATATTGTGATTCTGAGGTCGGTACAAGATATTATGATGCAAGGGTCGGTCCATCGTCTTCATACATGCATGGACACAAACGTGGCTATGGGAAACATAACAAATATTTGTATCATGTGTATCATGAAGCACCTGTAGAGGTATAG

Protein sequence

MTMIPTFGTGYCDSEVGTRYYDARVGPSSSYMHGHKRGYGKHNKYLYHVYHEAPVEV
Homology
[Close]
BLAST of MELO3C034231 vs. NCBI nr
Match: TYK01111.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 89.7 bits (221), Expect = 8.6e-15
Identity = 44/66 (66.67%), Postives = 49/66 (74.24%), Query Frame = 0 

Query: 1   MTMIPTFGTGYCDSEVGTRYYDARVGPSS---------SYMHGHKRGYGKHNKYLYHVYH 58
           MTM+PTFG GYCDS++GT YYDA VGPSS         SYMHGH RGYGKHN+YL   YH
Sbjct: 55  MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYL---YH 114

[Close]
BLAST of MELO3C034231 vs. NCBI nr
Match: KAA0048355.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 89.7 bits (221), Expect = 8.6e-15
Identity = 44/66 (66.67%), Postives = 49/66 (74.24%), Query Frame = 0 

Query: 1  MTMIPTFGTGYCDSEVGTRYYDARVGPSS---------SYMHGHKRGYGKHNKYLYHVYH 58
          MTM+PTFG GYCDS++GT YYDA VGPSS         SYMHGH RGYGKHN+YL   YH
Sbjct: 1  MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYL---YH 60

[Close]
BLAST of MELO3C034231 vs. NCBI nr
Match: KAA0061327.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 1.6e-13
Identity = 42/66 (63.64%), Postives = 47/66 (71.21%), Query Frame = 0 

Query: 1   MTMIPTFGTGYCDSEVGTRYYDA---------RVGPSSSYMHGHKRGYGKHNKYLYHVYH 58
           MTM+PTFG GYCDSEV T YYD           VGPS+SYMHGH RGYG+HN+YL   YH
Sbjct: 49  MTMMPTFGAGYCDSEVDTGYYDVGVGSSSSYMNVGPSASYMHGHGRGYGEHNEYL---YH 108

[Close]
BLAST of MELO3C034231 vs. NCBI nr
Match: KAA0054357.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa] >TYK12395.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 84.7 bits (208), Expect = 2.8e-13
Identity = 42/66 (63.64%), Postives = 48/66 (72.73%), Query Frame = 0 

Query: 1   MTMIPTFGTGYCDSEVGTRYYDARVGPSS---------SYMHGHKRGYGKHNKYLYHVYH 58
           MT++PTFG GYCDS+V T YYDA VGPSS         SYMHGH RGYG+HN+YL   YH
Sbjct: 188 MTVMPTFGAGYCDSKVSTGYYDAGVGPSSLYMDVGPSNSYMHGHGRGYGEHNQYL---YH 247

[Close]
BLAST of MELO3C034231 vs. NCBI nr
Match: KAA0049532.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK16210.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 84.3 bits (207), Expect = 3.6e-13
Identity = 42/66 (63.64%), Postives = 47/66 (71.21%), Query Frame = 0 

Query: 1   MTMIPTFGTGYCDSEVGTRYYDA---------RVGPSSSYMHGHKRGYGKHNKYLYHVYH 58
           M M+PTFG GYCDSEV T YYDA          VGPS+SYMHGH RGYG+HN+YL   YH
Sbjct: 49  MMMMPTFGAGYCDSEVSTGYYDAGIGPLSSYMDVGPSNSYMHGHGRGYGEHNEYL---YH 108

[Close]
BLAST of MELO3C034231 vs. ExPASy TrEMBL
Match: A0A5D3BMS3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold612G00070 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.2e-15
Identity = 44/66 (66.67%), Postives = 49/66 (74.24%), Query Frame = 0 

Query: 1   MTMIPTFGTGYCDSEVGTRYYDARVGPSS---------SYMHGHKRGYGKHNKYLYHVYH 58
           MTM+PTFG GYCDS++GT YYDA VGPSS         SYMHGH RGYGKHN+YL   YH
Sbjct: 55  MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYL---YH 114

[Close]
BLAST of MELO3C034231 vs. ExPASy TrEMBL
Match: A0A5A7U3Y0 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00710 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.2e-15
Identity = 44/66 (66.67%), Postives = 49/66 (74.24%), Query Frame = 0 

Query: 1  MTMIPTFGTGYCDSEVGTRYYDARVGPSS---------SYMHGHKRGYGKHNKYLYHVYH 58
          MTM+PTFG GYCDS++GT YYDA VGPSS         SYMHGH RGYGKHN+YL   YH
Sbjct: 1  MTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYL---YH 60

[Close]
BLAST of MELO3C034231 vs. ExPASy TrEMBL
Match: A0A5A7V379 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold29891G00010 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 7.8e-14
Identity = 42/66 (63.64%), Postives = 47/66 (71.21%), Query Frame = 0 

Query: 1   MTMIPTFGTGYCDSEVGTRYYDA---------RVGPSSSYMHGHKRGYGKHNKYLYHVYH 58
           MTM+PTFG GYCDSEV T YYD           VGPS+SYMHGH RGYG+HN+YL   YH
Sbjct: 49  MTMMPTFGAGYCDSEVDTGYYDVGVGSSSSYMNVGPSASYMHGHGRGYGEHNEYL---YH 108

[Close]
BLAST of MELO3C034231 vs. ExPASy TrEMBL
Match: A0A5A7UIF6 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001780 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.3e-13
Identity = 42/66 (63.64%), Postives = 48/66 (72.73%), Query Frame = 0 

Query: 1   MTMIPTFGTGYCDSEVGTRYYDARVGPSS---------SYMHGHKRGYGKHNKYLYHVYH 58
           MT++PTFG GYCDS+V T YYDA VGPSS         SYMHGH RGYG+HN+YL   YH
Sbjct: 188 MTVMPTFGAGYCDSKVSTGYYDAGVGPSSLYMDVGPSNSYMHGHGRGYGEHNQYL---YH 247

[Close]
BLAST of MELO3C034231 vs. ExPASy TrEMBL
Match: A0A5D3CXX3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001390 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.7e-13
Identity = 42/66 (63.64%), Postives = 47/66 (71.21%), Query Frame = 0 

Query: 1   MTMIPTFGTGYCDSEVGTRYYDA---------RVGPSSSYMHGHKRGYGKHNKYLYHVYH 58
           M M+PTFG GYCDSEV T YYDA          VGPS+SYMHGH RGYG+HN+YL   YH
Sbjct: 49  MMMMPTFGAGYCDSEVSTGYYDAGIGPLSSYMDVGPSNSYMHGHGRGYGEHNEYL---YH 108

The following BLAST results are available for this feature:
BLAST of MELO3C034231 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK01111.18.6e-1566.67GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
KAA0048355.18.6e-1566.67GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
KAA0061327.11.6e-1363.64GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
KAA0054357.12.8e-1363.64serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
KAA0049532.13.6e-1363.64GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
BLAST of MELO3C034231 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034231 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BMS34.2e-1566.67GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... [more]
A0A5A7U3Y04.2e-1566.67GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... [more]
A0A5A7V3797.8e-1463.64GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... [more]
A0A5A7UIF61.3e-1363.64Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
A0A5D3CXX31.7e-1363.64GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... [more]
BLAST of MELO3C034231 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034231.1MELO3C034231.1mRNA