MELO3C034154 (gene) Melon (DHL92) v4

Overview
NameMELO3C034154
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr10: 11165193 .. 11165485 (+)
RNA-Seq ExpressionMELO3C034154
SyntenyMELO3C034154
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAACCCTTAAGGTAAATGGTGAGACAAGCCTACCTCCCTTGCCAAAAGAAACTCCAAAGGCCTCAATGTAGAACTTCAAGCAAAAGAAGACGGAAAAGAAGATGAAGAGGAGGTTGACGAGGATTATGTCTTCAAGTTCATTGATCATTACATCTGCAAGCCAATGGAAAAAGGATTTAAAGACGTAATTCAATGCCAGAACAATCTGCAAGAAATGCATTTGCGAAGTCAGAAGCAATTACACGATTTGGAACTCAAGGTTGACAATGCAAATGTTCATCACCAAACTTAG

mRNA sequence

ATAACCCTTAAGGTAAATGGTGAGACAAGCCTACCTCCCTTGCCAAAAGAAACTCCAAAGGCCTCAATGTAGAACTTCAAGCAAAAGAAGACGGAAAAGAAGATGAAGAGGAGGTTGACGAGGATTATGTCTTCAAGTTCATTGATCATTACATCTGCAAGCCAATGGAAAAAGGATTTAAAGACGTAATTCAATGCCAGAACAATCTGCAAGAAATGCATTTGCGAAGTCAGAAGCAATTACACGATTTGGAACTCAAGGTTGACAATGCAAATGTTCATCACCAAACTTAG

Coding sequence (CDS)

ATGGAAAAAGGATTTAAAGACGTAATTCAATGCCAGAACAATCTGCAAGAAATGCATTTGCGAAGTCAGAAGCAATTACACGATTTGGAACTCAAGGTTGACAATGCAAATGTTCATCACCAAACTTAG

Protein sequence

MEKGFKDVIQCQNNLQEMHLRSQKQLHDLELKVDNANVHHQT
Homology
BLAST of MELO3C034154 vs. NCBI nr
Match: KAA0054903.1 (hypothetical protein E6C27_scaffold43052G00310 [Cucumis melo var. makuwa] >TYK22691.1 hypothetical protein E5676_scaffold1163G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 72.8 bits (177), Expect = 8.0e-10
Identity = 34/42 (80.95%), Postives = 38/42 (90.48%), Query Frame = 0

Query: 1   MEKGFKDVIQCQNNLQEMHLRSQKQLHDLELKVDNANVHHQT 43
           ME+GF++VIQCQ  LQEMHLRS KQL+DLELKVDNAN HHQT
Sbjct: 155 MERGFENVIQCQRTLQEMHLRSHKQLNDLELKVDNANAHHQT 196

BLAST of MELO3C034154 vs. NCBI nr
Match: KGN49653.1 (hypothetical protein Csa_018510 [Cucumis sativus])

HSP 1 Score: 60.1 bits (144), Expect = 5.4e-06
Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = 0

Query: 1   MEKGFKDVIQCQNNLQEMHLRSQKQLHDLELKVDNANVHHQ 42
           M  GF+D IQCQ+N QEMH +SQKQL D +LK+DN N HHQ
Sbjct: 61  MSSGFEDEIQCQSNFQEMHFQSQKQLEDFKLKLDNKNHHHQ 101

BLAST of MELO3C034154 vs. NCBI nr
Match: KAA0049656.1 (hypothetical protein E6C27_scaffold163G001250 [Cucumis melo var. makuwa] >TYK19034.1 hypothetical protein E5676_scaffold368G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 59.7 bits (143), Expect = 7.0e-06
Identity = 27/41 (65.85%), Postives = 35/41 (85.37%), Query Frame = 0

Query: 1  MEKGFKDVIQCQNNLQEMHLRSQKQLHDLELKVDNANVHHQ 42
          +E+GF+D  QCQ+NLQEM LRSQKQ+ DLELK+DNA+  +Q
Sbjct: 24 LERGFEDTFQCQSNLQEMQLRSQKQVSDLELKIDNASASNQ 64

BLAST of MELO3C034154 vs. NCBI nr
Match: TYK07283.1 (hypothetical protein E5676_scaffold606G001830 [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 1.6e-05
Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = 0

Query: 1   MEKGFKDVIQCQNNLQEMHLRSQKQLHDLELKVDNANVHHQ 42
           M  GF+DVIQCQ+NLQ+MHL  QKQL D E+K+ N N HHQ
Sbjct: 125 MSNGFEDVIQCQSNLQKMHLCCQKQLRDFEVKLQNINHHHQ 165

BLAST of MELO3C034154 vs. NCBI nr
Match: KAE8646246.1 (hypothetical protein Csa_023826, partial [Cucumis sativus])

HSP 1 Score: 57.0 bits (136), Expect = 4.5e-05
Identity = 29/37 (78.38%), Postives = 32/37 (86.49%), Query Frame = 0

Query: 1   MEKGFKDVIQCQNNLQEMHLRSQKQLHDLELKVDNAN 38
           ME GF+D+IQ Q+NLQEM L SQKQL DLELKVDNAN
Sbjct: 82  MENGFEDMIQWQSNLQEMQLWSQKQLSDLELKVDNAN 118

BLAST of MELO3C034154 vs. ExPASy TrEMBL
Match: A0A5D3DG66 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00070 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.9e-10
Identity = 34/42 (80.95%), Postives = 38/42 (90.48%), Query Frame = 0

Query: 1   MEKGFKDVIQCQNNLQEMHLRSQKQLHDLELKVDNANVHHQT 43
           ME+GF++VIQCQ  LQEMHLRS KQL+DLELKVDNAN HHQT
Sbjct: 155 MERGFENVIQCQRTLQEMHLRSHKQLNDLELKVDNANAHHQT 196

BLAST of MELO3C034154 vs. ExPASy TrEMBL
Match: A0A0A0KJB9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G049020 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.6e-06
Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = 0

Query: 1   MEKGFKDVIQCQNNLQEMHLRSQKQLHDLELKVDNANVHHQ 42
           M  GF+D IQCQ+N QEMH +SQKQL D +LK+DN N HHQ
Sbjct: 61  MSSGFEDEIQCQSNFQEMHFQSQKQLEDFKLKLDNKNHHHQ 101

BLAST of MELO3C034154 vs. ExPASy TrEMBL
Match: A0A5D3D645 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold368G00010 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.4e-06
Identity = 27/41 (65.85%), Postives = 35/41 (85.37%), Query Frame = 0

Query: 1  MEKGFKDVIQCQNNLQEMHLRSQKQLHDLELKVDNANVHHQ 42
          +E+GF+D  QCQ+NLQEM LRSQKQ+ DLELK+DNA+  +Q
Sbjct: 24 LERGFEDTFQCQSNLQEMQLRSQKQVSDLELKIDNASASNQ 64

BLAST of MELO3C034154 vs. ExPASy TrEMBL
Match: A0A5D3C5U6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G001830 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.6e-06
Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = 0

Query: 1   MEKGFKDVIQCQNNLQEMHLRSQKQLHDLELKVDNANVHHQ 42
           M  GF+DVIQCQ+NLQ+MHL  QKQL D E+K+ N N HHQ
Sbjct: 125 MSNGFEDVIQCQSNLQKMHLCCQKQLRDFEVKLQNINHHHQ 165

BLAST of MELO3C034154 vs. ExPASy TrEMBL
Match: A0A5A7T3H5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001500 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.4e-04
Identity = 24/41 (58.54%), Postives = 33/41 (80.49%), Query Frame = 0

Query: 1  MEKGFKDVIQCQNNLQEMHLRSQKQLHDLELKVDNANVHHQ 42
          +++G +  ++ + NL EMHLRSQKQLHDLELK DN+N H+Q
Sbjct: 17 LQRGKETTLKSERNLYEMHLRSQKQLHDLELKCDNSNAHNQ 57

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0054903.18.0e-1080.95hypothetical protein E6C27_scaffold43052G00310 [Cucumis melo var. makuwa] >TYK22... [more]
KGN49653.15.4e-0665.85hypothetical protein Csa_018510 [Cucumis sativus][more]
KAA0049656.17.0e-0665.85hypothetical protein E6C27_scaffold163G001250 [Cucumis melo var. makuwa] >TYK190... [more]
TYK07283.11.6e-0565.85hypothetical protein E5676_scaffold606G001830 [Cucumis melo var. makuwa][more]
KAE8646246.14.5e-0578.38hypothetical protein Csa_023826, partial [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DG663.9e-1080.95Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KJB92.6e-0665.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G049020 PE=4 SV=1[more]
A0A5D3D6453.4e-0665.85Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3C5U67.6e-0665.85Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7T3H51.4e-0458.54Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034154.1MELO3C034154.1mRNA