MELO3C034113 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034113
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Girdin-like
Location	chr06: 27711853 .. 27712332 (+)
RNA-Seq Expression	MELO3C034113
Synteny	MELO3C034113

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAAATAAAAGGAAGAATATAATAATTACCTTAAGGGAGGTAGTTGAAAGCGTAAAAGAGACAAACTTTGAACAACCAAATCAGTGGGTTGAGAAAAGCATAGAATTAGAAGAGAAAAATCAACTATTAGAGCAAGAGAACGAGAAATTTCGTAAAGAGACAAGTCAGTGGATGGATTATGCGACTTATTTGTAGAAAGAACTCGAAAAGACCAAGAGTTTCTTAAGAAATTAAGATAAGTTAGAAAAGAATCTTGAGGCATTAGATAAGGAGATGAGACGAATGAATAAAGCAAATAGAAGTTTGAAAAATGAAAAGACAACATTACAAGCAATAGTGGAGTCGCAAGATGAATATATTAAAGATTTAGAAAGTGGGAAGGAATATTTTCTCAAGCTTGTCAATGATTTGAATACATCAATTGAAAAATGGAAAACACAGATAATGGATTTGAAAGCACATAATCATTCTTTGTGTCAA

mRNA sequence

GCAAATAAAAGGAAGAATATAATAATTACCTTAAGGGAGGTAGTTGAAAGCGTAAAAGAGACAAACTTTGAACAACCAAATCAGTGGGTTGAGAAAAGCATAGAATTAGAAGAGAAAAATCAACTATTAGAGCAAGAGAACGAGAAATTTCGTAAAGAGACAAGTCAGTGGATGGATTATGCGACTTATTTGTAGAAAGAACTCGAAAAGACCAAGAGTTTCTTAAGAAATTAAGATAAGTTAGAAAAGAATCTTGAGGCATTAGATAAGGAGATGAGACGAATGAATAAAGCAAATAGAAGTTTGAAAAATTTAGAAAGTGGGAAGGAATATTTTCTCAAGCTTGTCAATGATTTGAATACATCAATTGAAAAATGGAAAACACAGATAATGGATTTGAAAGCACATAATCATTCTTTGTGTCAA

Coding sequence (CDS)

GCAAATAAAAGGAAGAATATAATAATTACCTTAAGGGAGGTAGTTGAAAGCGTAAAAGAGACAAACTTTGAACAACCAAATCAGTGGGTTGAGAAAAGCATAGAATTAGAAGAGAAAAATCAACTATTAGAGCAAGAGAACGAGAAATTTCGTAAAGAGACAAGTCAGTGGATGGATTATGCGACTTATTTGTAG

Protein sequence

ANKRKNIIITLREVVESVKETNFEQPNQWVEKSIELEEKNQLLEQENEKFRKETSQWMDYATYL

Homology

[Close]

BLAST of MELO3C034113 vs. NCBI nr
Match: KAA0036941.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 105.1 bits (261), Expect = 2.2e-19
Identity = 54/64 (84.38%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 1   ANKRKNIIITLREVVESVKETNFEQPNQWVEKSIELEEKNQLLEQENEKFRKETSQWMDY 60
           AN+RKNII   REVVES KET+FEQPNQW+EKSIELEEKN+LLEQENEK RKETSQWMD+
Sbjct: 392 ANRRKNIIDISREVVESGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETSQWMDH 451

Query: 61  ATYL 65
           ATYL
Sbjct: 452 ATYL 455

[Close]

BLAST of MELO3C034113 vs. NCBI nr
Match: TYK16558.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 103.2 bits (256), Expect = 8.4e-19
Identity = 53/64 (82.81%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 1   ANKRKNIIITLREVVESVKETNFEQPNQWVEKSIELEEKNQLLEQENEKFRKETSQWMDY 60
           AN+RKNII   REVVE  KET+FEQPNQW+EKSIELEEKN+LLEQENEK RKETSQWMD+
Sbjct: 127 ANRRKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETSQWMDH 186

Query: 61  ATYL 65
           ATYL
Sbjct: 187 ATYL 190

[Close]

BLAST of MELO3C034113 vs. NCBI nr
Match: KAA0044912.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 103.2 bits (256), Expect = 8.4e-19
Identity = 53/64 (82.81%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 1   ANKRKNIIITLREVVESVKETNFEQPNQWVEKSIELEEKNQLLEQENEKFRKETSQWMDY 60
           AN+RKNII   REVVE  KET+FEQPNQW+EKSIELEEKN+LLEQENEK RKETSQWMD+
Sbjct: 236 ANRRKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETSQWMDH 295

Query: 61  ATYL 65
           ATYL
Sbjct: 296 ATYL 299

[Close]

BLAST of MELO3C034113 vs. NCBI nr
Match: KAA0036955.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 103.2 bits (256), Expect = 8.4e-19
Identity = 53/64 (82.81%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 1   ANKRKNIIITLREVVESVKETNFEQPNQWVEKSIELEEKNQLLEQENEKFRKETSQWMDY 60
           AN+RKNII   REVVE  KET+FEQPNQW+EKSIELEEKN+LLEQENEK RKETSQWMD+
Sbjct: 168 ANRRKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETSQWMDH 227

Query: 61  ATYL 65
           ATYL
Sbjct: 228 ATYL 231

[Close]

BLAST of MELO3C034113 vs. NCBI nr
Match: TYK07552.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 102.4 bits (254), Expect = 1.4e-18
Identity = 53/64 (82.81%), Postives = 57/64 (89.06%), Query Frame = 0


Query: 1   ANKRKNIIITLREVVESVKETNFEQPNQWVEKSIELEEKNQLLEQENEKFRKETSQWMDY 60
           ANKRKNII   REVVE  KET+F QPNQW+EKSIELEEKN+LLEQENEK RKETSQWMD+
Sbjct: 413 ANKRKNIIDISREVVEKGKETSFTQPNQWIEKSIELEEKNRLLEQENEKLRKETSQWMDH 472

Query: 61  ATYL 65
           ATYL
Sbjct: 473 ATYL 476

[Close]

BLAST of MELO3C034113 vs. ExPASy TrEMBL
Match: A0A5A7T5S7 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.1e-19
Identity = 54/64 (84.38%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 1   ANKRKNIIITLREVVESVKETNFEQPNQWVEKSIELEEKNQLLEQENEKFRKETSQWMDY 60
           AN+RKNII   REVVES KET+FEQPNQW+EKSIELEEKN+LLEQENEK RKETSQWMD+
Sbjct: 392 ANRRKNIIDISREVVESGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETSQWMDH 451

Query: 61  ATYL 65
           ATYL
Sbjct: 452 ATYL 455

[Close]

BLAST of MELO3C034113 vs. ExPASy TrEMBL
Match: A0A5D3CZ50 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003770 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.1e-19
Identity = 53/64 (82.81%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 1   ANKRKNIIITLREVVESVKETNFEQPNQWVEKSIELEEKNQLLEQENEKFRKETSQWMDY 60
           AN+RKNII   REVVE  KET+FEQPNQW+EKSIELEEKN+LLEQENEK RKETSQWMD+
Sbjct: 127 ANRRKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETSQWMDH 186

Query: 61  ATYL 65
           ATYL
Sbjct: 187 ATYL 190

[Close]

BLAST of MELO3C034113 vs. ExPASy TrEMBL
Match: A0A5A7T642 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00350 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.1e-19
Identity = 53/64 (82.81%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 1   ANKRKNIIITLREVVESVKETNFEQPNQWVEKSIELEEKNQLLEQENEKFRKETSQWMDY 60
           AN+RKNII   REVVE  KET+FEQPNQW+EKSIELEEKN+LLEQENEK RKETSQWMD+
Sbjct: 168 ANRRKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETSQWMDH 227

Query: 61  ATYL 65
           ATYL
Sbjct: 228 ATYL 231

[Close]

BLAST of MELO3C034113 vs. ExPASy TrEMBL
Match: A0A5A7TNJ1 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002070 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.1e-19
Identity = 53/64 (82.81%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 1   ANKRKNIIITLREVVESVKETNFEQPNQWVEKSIELEEKNQLLEQENEKFRKETSQWMDY 60
           AN+RKNII   REVVE  KET+FEQPNQW+EKSIELEEKN+LLEQENEK RKETSQWMD+
Sbjct: 236 ANRRKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETSQWMDH 295

Query: 61  ATYL 65
           ATYL
Sbjct: 296 ATYL 299

[Close]

BLAST of MELO3C034113 vs. ExPASy TrEMBL
Match: A0A5D3C8D9 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold544G00220 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.0e-19
Identity = 53/64 (82.81%), Postives = 57/64 (89.06%), Query Frame = 0


Query: 1   ANKRKNIIITLREVVESVKETNFEQPNQWVEKSIELEEKNQLLEQENEKFRKETSQWMDY 60
           ANKRKNII   REVVE  KET+F QPNQW+EKSIELEEKN+LLEQENEK RKETSQWMD+
Sbjct: 413 ANKRKNIIDISREVVEKGKETSFTQPNQWIEKSIELEEKNRLLEQENEKLRKETSQWMDH 472

Query: 61  ATYL 65
           ATYL
Sbjct: 473 ATYL 476

The following BLAST results are available for this feature:

BLAST of MELO3C034113 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036941.1	2.2e-19	84.38	girdin-like [Cucumis melo var. makuwa]	[more]
TYK16558.1	8.4e-19	82.81	girdin-like [Cucumis melo var. makuwa]	[more]
KAA0044912.1	8.4e-19	82.81	girdin-like [Cucumis melo var. makuwa]	[more]
KAA0036955.1	8.4e-19	82.81	girdin-like [Cucumis melo var. makuwa]	[more]
TYK07552.1	1.4e-18	82.81	girdin-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C034113 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C034113 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T5S7	1.1e-19	84.38	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=...	[more]
A0A5D3CZ50	4.1e-19	82.81	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003770 PE...	[more]
A0A5A7T642	4.1e-19	82.81	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00350 PE=...	[more]
A0A5A7TNJ1	4.1e-19	82.81	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002070 PE...	[more]
A0A5D3C8D9	7.0e-19	82.81	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold544G00220 PE...	[more]

BLAST of MELO3C034113 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 33..56

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034113.1	MELO3C034113.1	mRNA