MELO3C034054 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034054
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Transcription termination factor MTERF5
Location	chr10: 4907645 .. 4909099 (-)
RNA-Seq Expression	MELO3C034054
Synteny	MELO3C034054

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACCCCAACTTGCAACCTTTTGTTGAAAACTTTCGATCCAAACCCAAAATGTCTATAATTTCCTCCAATTTTTTTCTATATTTCATACAAAAACGTTTCGTCAATACGGTTTCTGGTCCTACGTTGCCTTTAGCGTCTGTTTCCACAATTGAATTCCTAAAGAATTCATGTGGGCTTGCTTCAGAATCTCCTTCTTCCGCCGTCGAAAGCTCCAAATCGATGAAAAAAACTCCCAGAAGTACGAAACCGTTATCGGTTTCTTGCAATCGCATGGATTCGAGAATTCACAGATCGCCAAGTTGGTCTCGAGACAACCTTCGGTTCTTCATAACAAAGTATCCACCAATCTGAAGCCTAAATTTGAGTTCCTCCAGGAAATCGGGTTCGACGGTCCTTTACTTCCTAAGCTAATTCTATCAAACCCTGTGATTCTTGCAAGGAGCTTAGATTCTCAATTGAAACCATCATTTTTTTTCTTGAAGGAAATTGTTGAATCGGATGAAAAAGCAACTGCTTCTATTTGGCGTTGTTCGTGGCTTCTAACTTTTAATTTGAAAGGTATTTTAAAACCTAACACTGATTTATTGGTCAGGGAAGGAATAGCTTCTAGGAGTATAGCGAAATTGATTGTAAAGGAGCCTAGAACTATAATGCAAAAGGTTGATAGAATGATTCAAGTAGTGAAAATGGTTAAAGAATTGGGCATTGAACCAAAGTCTGGTATGTTTGTTCGTGCACTTAAAATAAGGTGTTCAATGAGTGATTCAAATTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTTTTACAGCATTTAAGAAAGAACCAAAATACTTAGGTTGTTCAGAGGAGAAACTGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATCCAGAAACTGTAATTTCTTACCCTACGTTATTCATGAGTGCACTGGACAAACTCCGACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAGTCTTCTTAAGAACATTAAGATCCCTCGGATGCTTGTAGGAGGGGAGAGAGAATTTGTGGAGAAATATGTTGTTAAACATTTGAATGAGATCCCAAATCTGATGGACATATACCGGGGCAATGTCACAACCGGAACCAAATCTGTTCTATAGGATTGGAAAGTTGTAAGTTAATAATCTTCTTATAGTTTAAATTTCAGCATCAGGATCTTCAAATGGGAGAGCATTTTTGTTGTTATTAATAAGCCTACTGTTTGAAAGAACACCGCCTCCTTAAGATTTTCATATGGGGATCTCTCTTTTTCAAGTGGGAGAGTTCTATTGTTATTCCTTCCAATTTAAGGCTGTTGGCTAAATCTATTGCTGTATATTTCTTAATGTTGCTAAGTATGTATAGCCTAATTCTGGTTCCGATGACCTTGGAATGAGAGGCATTTTGT

mRNA sequence

AAAACCCCAACTTGCAACCTTTTGTTGAAAACTTTCGATCCAAACCCAAAATGTCTATAATTTCCTCCAATTTTTTTCTATATTTCATACAAAAACGTTTCGTCAATACGGTTTCTGGTCCTACGTTGCCTTTAGCGTCTGTTTCCACAATTGAATTCCTAAAGAATTCATGTGGGCTTGCTTCAGAATCTCCTTCTTCCGCCGTCGAAAGCTCCAAATCGATGAAAAAAACTCCCAGAAGTACGAAACCGTTATCGGTTTCTTGCAATCGCATGGATTCGAGAATTCACAGATCGCCAAGTTGGTCTCGAGACAACCTTCGGTTCTTCATAACAAAGTATCCACCAATCTGAAGCCTAAATTTGAGTTCCTCCAGGAAATCGGGTTCGACGGTCCTTTACTTCCTAAGCTAATTCTATCAAACCCTGTGATTCTTGCAAGGAGCTTAGATTCTCAATTGAAACCATCATTTTTTTTCTTGAAGGAAATTGTTGAATCGGATGAAAAAGCAACTGCTTCTATTTGGCGTTGTTCGTGGCTTCTAACTTTTAATTTGAAAGGTATTTTAAAACCTAACACTGATTTATTGGTCAGGGAAGGAATAGCTTCTAGGAGTATAGCGAAATTGATTGTAAAGGAGCCTAGAACTATAATGCAAAAGGTTGATAGAATGATTCAAGTAGTGAAAATGGTTAAAGAATTGGGCATTGAACCAAAGTCTGGTATGTTTGTTCGTGCACTTAAAATAAGGTGTTCAATGAGTGATTCAAATTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTTTTACAGCATTTAAGAAAGAACCAAAATACTTAGGTTGTTCAGAGGAGAAACTGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATCCAGAAACTGTAATTTCTTACCCTACGTTATTCATGAGTGCACTGGACAAACTCCGACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAGTCTTCTTAAGAACATTAAGATCCCTCGGATGCTTGTAGGAGGGGAGAGAGAATTTGTGGAGAAATATGTTGTTAAACATTTGAATGAGATCCCAAATCTGATGGACATATACCGGGGCAATGTCACAACCGGAACCAAATCTGTTCTATAGGATTGGAAAGTTGTAAGTTAATAATCTTCTTATAGTTTAAATTTCAGCATCAGGATCTTCAAATGGGAGAGCATTTTTGTTGTTATTAATAAGCCTACTGTTTGAAAGAACACCGCCTCCTTAAGATTTTCATATGGGGATCTCTCTTTTTCAAGTGGGAGAGTTCTATTGTTATTCCTTCCAATTTAAGGCTGTTGGCTAAATCTATTGCTGTATATTTCTTAATGTTGCTAAGTATGTATAGCCTAATTCTGGTTCCGATGACCTTGGAATGAGAGGCATTTTGT

Coding sequence (CDS)

ATGTGGGCTTGCTTCAGAATCTCCTTCTTCCGCCGTCGAAAGCTCCAAATCGATGAAAAAAACTCCCAGAAGTACGAAACCGTTATCGGTTTCTTGCAATCGCATGGATTCGAGAATTCACAGATCGCCAAGTTGGTCTCGAGACAACCTTCGGTTCTTCATAACAAAGTATCCACCAATCTGAAGCCTAAATTTGAGTTCCTCCAGGAAATCGGGTTCGACGGTCCTTTACTTCCTAAGCTAATTCTATCAAACCCTGTGATTCTTGCAAGGAGCTTAGATTCTCAATTGAAACCATCATTTTTTTTCTTGAAGGAAATTGTTGAATCGGATGAAAAAGCAACTGCTTCTATTTGGCGTTGTTCGTGGCTTCTAACTTTTAATTTGAAAGGTATTTTAAAACCTAACACTGATTTATTGGTCAGGGAAGGAATAGCTTCTAGGAGTATAGCGAAATTGATTGTAAAGGAGCCTAGAACTATAATGCAAAAGGTTGATAGAATGATTCAAGTAGTGAAAATGGTTAAAGAATTGGGCATTGAACCAAAGTCTGGTATGTTTGTTCGTGCACTTAAAATAAGGTGTTCAATGAGTGATTCAAATTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTTTTACAGCATTTAAGAAAGAACCAAAATACTTAGGTTGTTCAGAGGAGAAACTGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATCCAGAAACTGTAATTTCTTACCCTACGTTATTCATGAGTGCACTGGACAAACTCCGACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAGTCTTCTTAAGAACATTAAGATCCCTCGGATGCTTGTAGGAGGGGAGAGAGAATTTGTGGAGAAATATGTTGTTAAACATTTGAATGAGATCCCAAATCTGATGGACATATACCGGGGCAATGTCACAACCGGAACCAAATCTGTTCTATAG

Protein sequence

MWACFRISFFRRRKLQIDEKNSQKYETVIGFLQSHGFENSQIAKLVSRQPSVLHNKVSTNLKPKFEFLQEIGFDGPLLPKLILSNPVILARSLDSQLKPSFFFLKEIVESDEKATASIWRCSWLLTFNLKGILKPNTDLLVREGIASRSIAKLIVKEPRTIMQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKKINVMKSLGWSEKEIFTAFKKEPKYLGCSEEKLRDVADFCFNTAKLDPETVISYPTLFMSALDKLRPRYKVLEVLKVKSLLKNIKIPRMLVGGEREFVEKYVVKHLNEIPNLMDIYRGNVTTGTKSVL

Homology

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BLAST of MELO3C034054 vs. NCBI nr
Match: KAA0034097.1 (transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15822.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 655.2 bits (1689), Expect = 3.0e-184
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0


Query: 1   MWACFRISFFRRRKLQIDEKNSQKYETVIGFLQSHGFENSQIAKLVSRQPSVLHNKVSTN 60
           MWACFRISFFRRRKLQIDEKNSQKYETVIGFLQSHGFENSQIAKLVSRQPSVLHNKVSTN
Sbjct: 1   MWACFRISFFRRRKLQIDEKNSQKYETVIGFLQSHGFENSQIAKLVSRQPSVLHNKVSTN 60

Query: 61  LKPKFEFLQEIGFDGPLLPKLILSNPVILARSLDSQLKPSFFFLKEIVESDEKATASIWR 120
           LKPKFEFLQEIGFDGPLLPKLILSNPVILARSLDSQLKPSFFFLKEIVESDEKATASIWR
Sbjct: 61  LKPKFEFLQEIGFDGPLLPKLILSNPVILARSLDSQLKPSFFFLKEIVESDEKATASIWR 120

Query: 121 CSWLLTFNLKGILKPNTDLLVREGIASRSIAKLIVKEPRTIMQKVDRMIQVVKMVKELGI 180
           CSWLLTFNLKGILKPNTDLLVREGIASRSIAKLIVKEPRTIMQKVDRMIQVVKMVKELGI
Sbjct: 121 CSWLLTFNLKGILKPNTDLLVREGIASRSIAKLIVKEPRTIMQKVDRMIQVVKMVKELGI 180

Query: 181 EPKSGMFVRALKIRCSMSDSNWKKKINVMKSLGWSEKEIFTAFKKEPKYLGCSEEKLRDV 240
           EPKSGMFVRALKIRCSMSDSNWKKKINVMKSLGWSEKEIFTAFKKEPKYLGCSEEKLRDV
Sbjct: 181 EPKSGMFVRALKIRCSMSDSNWKKKINVMKSLGWSEKEIFTAFKKEPKYLGCSEEKLRDV 240

Query: 241 ADFCFNTAKLDPETVISYPTLFMSALDKLRPRYKVLEVLKVKSLLKNIKIPRMLVGGERE 300
           ADFCFNTAKLDPETVISYPTLFMSALDKLRPRYKVLEVLKVKSLLKNIKIPRMLVGGERE
Sbjct: 241 ADFCFNTAKLDPETVISYPTLFMSALDKLRPRYKVLEVLKVKSLLKNIKIPRMLVGGERE 300

Query: 301 FVEKYVVKHLNEIPNLMDIYRGNVTTGTKSVL 333
           FVEKYVVKHLNEIPNLMDIYRGNVTTGTKSVL
Sbjct: 301 FVEKYVVKHLNEIPNLMDIYRGNVTTGTKSVL 332

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BLAST of MELO3C034054 vs. NCBI nr
Match: XP_011655506.2 (transcription termination factor MTERF9, chloroplastic-like [Cucumis sativus] >KAE8648626.1 hypothetical protein Csa_008456 [Cucumis sativus])

HSP 1 Score: 478.4 bits (1230), Expect = 5.0e-131
Identity = 242/321 (75.39%), Postives = 277/321 (86.29%), Query Frame = 0


Query: 13  RKLQIDEKNSQKYETVIGFLQSHGFENSQIAKLVSRQPSVLHNKVSTNLKPKFEFLQEIG 72
           RKLQ DEK+ Q+YE +IGF +SHGFENSQIAKLVSR+P +LH KV  NLKPK EFLQEIG
Sbjct: 53  RKLQFDEKHLQQYEAIIGFFKSHGFENSQIAKLVSRKPQILHCKVPNNLKPKVEFLQEIG 112

Query: 73  FDGPLLPKLILSNPVILARSLDSQLKPSFFFLKEIVESDEKATASIWRCSWLLTFNLKGI 132
           F GPLLPKLI++NP IL  SLDS LKPSF  +KE++ESDE+ TA+I R SWLLTF+ KGI
Sbjct: 113 FIGPLLPKLIITNPSILLCSLDSHLKPSFCLIKEMLESDEQVTAAICRSSWLLTFDSKGI 172

Query: 133 LKPNTDLLVREGIASRSIAKLIVKEPRTIMQKVDRMIQVVKMVKELGIEPKSGMFVRALK 192
           +KPN D+LV EG+ SR+IAKLI  +PR +MQKVDR IQVV+ VKELGIEPK+ +F+ AL+
Sbjct: 173 IKPNCDVLVSEGVPSRNIAKLIQVQPRAVMQKVDRFIQVVQTVKELGIEPKARLFIHALR 232

Query: 193 IRCSMSDSNWKKKINVMKSLGWSEKEIFTAFKKEPKYLGCSEEKLRDVADFCFNTAKLDP 252
           +R S+SDSNWKKKINV+KSLG SEKEI TAFKKEPKYL CSEEK+RDVADFCFNTAKLDP
Sbjct: 233 VRSSLSDSNWKKKINVLKSLGLSEKEILTAFKKEPKYLACSEEKIRDVADFCFNTAKLDP 292

Query: 253 ETVISYPTLFMSALDKLRPRYKVLEVLKVKSLLKNIKI-PRMLVGGEREFVEKYVVKHLN 312
           ETVISYPT+FMSALDKLR RYKVLE LKVKSLLKN+KI PR LV  ER+F+E YVVKHL+
Sbjct: 293 ETVISYPTIFMSALDKLRQRYKVLEALKVKSLLKNVKILPRALVRAERDFMEMYVVKHLD 352

Query: 313 EIPNLMDIYRGNVTTGTKSVL 333
           +IPNLMDIYRGNV   TKSVL
Sbjct: 353 KIPNLMDIYRGNVAAETKSVL 373

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BLAST of MELO3C034054 vs. NCBI nr
Match: XP_031741173.1 (uncharacterized protein LOC101219984 [Cucumis sativus] >KAE8648634.1 hypothetical protein Csa_007862 [Cucumis sativus])

HSP 1 Score: 476.5 bits (1225), Expect = 1.9e-130
Identity = 244/322 (75.78%), Postives = 277/322 (86.02%), Query Frame = 0


Query: 13  RKLQIDEKNSQKYETVIGFLQSHGFENSQIAKLVSRQPSVLHNKVSTNLKPKFEFLQEIG 72
           RKLQ DE+N QKY  VIGFL+SH FEN QIA LVSR+PS+L +KVSTNLKPKFEFLQEIG
Sbjct: 53  RKLQFDEQNIQKYGAVIGFLKSHAFENPQIANLVSRRPSLLQSKVSTNLKPKFEFLQEIG 112

Query: 73  FDGPLLPKLILSNPVILARSLDSQLKPSFFFLKEIVESDEKATASIWRCSWLLTFNLKGI 132
           F GPLLPKLIL+NP IL  SLDS LKPSF  LKE+VESDE+ TA+I+R SWL TFN K I
Sbjct: 113 FVGPLLPKLILANPSILLWSLDSHLKPSFRLLKEMVESDEQVTAAIFRSSWLPTFNFKSI 172

Query: 133 LKPNTDLLVREGIASRSIAKLIVKEPRTIMQKVDRMIQVVKMVKELGIEPKSGMFVRALK 192
           +KPN D+LV EG+ SR++AKLI  +PR I QKVDR+IQVV+ VKELGIEPK+ +F+RAL+
Sbjct: 173 VKPNFDVLVSEGVPSRNLAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALR 232

Query: 193 IRCSMSDSNWKKKINVMKSLGWSEKEIFTAFKKEPKYLGCSEEKLRDVADFCFNTAKLDP 252
           +  S+SDS WKKKINVMKSLGWSEKEI TAFKKEPKYLGCSEEK+RDVADFC NTAKLDP
Sbjct: 233 VMSSLSDSTWKKKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDP 292

Query: 253 ETVISYPTLFMSALDKLRPRYKVLEVLKVKSLLKNIKIPRMLVGGEREFVEKYVVKHLNE 312
           ETV+SYP LFMSALDKLRPRYKV+EVLKVK+LLKN KI  +L+  EREFVEKY+VKHL+E
Sbjct: 293 ETVLSYPALFMSALDKLRPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDE 352

Query: 313 IPNLMDIYRGNV--TTGTKSVL 333
           IPNLMDIYRGNV     TKSV+
Sbjct: 353 IPNLMDIYRGNVEAEAETKSVV 374

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BLAST of MELO3C034054 vs. NCBI nr
Match: XP_008445932.1 (PREDICTED: uncharacterized protein LOC103488811 [Cucumis melo] >KAA0034111.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15810.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 469.9 bits (1208), Expect = 1.8e-128
Identity = 244/322 (75.78%), Postives = 275/322 (85.40%), Query Frame = 0


Query: 13  RKLQIDEKNSQKYETVIGFLQSHGFENSQIAKLVSRQPSVLHNKVSTNLKPKFEFLQEIG 72
           RKLQ DEK+ Q+Y  VI FL+SHGFEN+QIA LVS++PS+L +KVSTNLKP+FEF QEIG
Sbjct: 53  RKLQFDEKHIQQYGAVIDFLKSHGFENTQIANLVSKRPSILQSKVSTNLKPRFEFFQEIG 112

Query: 73  FDGPLLPKLILSNPVILARSLDSQLKPSFFFLKEIVESDEKATASIWRCSWLLTFNLKGI 132
           F GPLLPKLILS P +L  SLDSQLKPSFFFLK+I+ESDE+ TA+I R   LL  +LKG 
Sbjct: 113 FIGPLLPKLILSTPWVLGSSLDSQLKPSFFFLKDILESDEQVTAAICRFPSLLVSDLKGN 172

Query: 133 LKPNTDLLVREGIASRSIAKLIVKEPRTIMQKVDRMIQVVKMVKELGIEPKSGMFVRALK 192
           LK N D+L  EG+ SR+IAK+I  +PRT+MQKVDRMIQVVK VKELGIEPK+  FV A++
Sbjct: 173 LKSNIDVLASEGVPSRNIAKMIEMDPRTVMQKVDRMIQVVKKVKELGIEPKTRKFVHAIR 232

Query: 193 IRCSMSDSNWKKKINVMKSLGWSEKEIFTAFKKEPKYLGCSEEKLRDVADFCFNTAKLDP 252
           IR S+SDS WKKKINVMKSLGWSE EI TAFKK+P YL CSEEKLRDV DFC NTAKLDP
Sbjct: 233 IRGSLSDSTWKKKINVMKSLGWSENEILTAFKKDPNYLSCSEEKLRDVTDFCLNTAKLDP 292

Query: 253 ETVISYPTLFMSALDK-LRPRYKVLEVLKVKSLLK-NIKIPRMLVGGEREFVEKYVVKHL 312
           ETVISYPTLFMSALDK LRPR+K+LE LKVKSLLK NIKIPR LV GEREFVE+YVVKHL
Sbjct: 293 ETVISYPTLFMSALDKRLRPRFKILEALKVKSLLKNNIKIPRALVRGEREFVERYVVKHL 352

Query: 313 NEIPNLMDIYRGNVTTGTKSVL 333
           ++IPNLMDIYRGNV T TKSVL
Sbjct: 353 DKIPNLMDIYRGNVATETKSVL 374

[Close]

BLAST of MELO3C034054 vs. NCBI nr
Match: XP_008446011.1 (PREDICTED: uncharacterized protein LOC103488865 [Cucumis melo] >KAA0034174.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15745.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 466.5 bits (1199), Expect = 2.0e-127
Identity = 240/321 (74.77%), Postives = 273/321 (85.05%), Query Frame = 0


Query: 13  RKLQIDEKNSQKYETVIGFLQSHGFENSQIAKLVSRQPSVLHNKVSTNLKPKFEFLQEIG 72
           RKLQ DEKN Q+YE VIGFL+SHG EN QIAKLVSR+P +L +KVSTNLKPKFEFLQEIG
Sbjct: 53  RKLQFDEKNIQQYEAVIGFLKSHGLENPQIAKLVSRKPWILQSKVSTNLKPKFEFLQEIG 112

Query: 73  FDGPLLPKLILSNPVILARSLDSQLKPSFFFLKEIVESDEKATASIWRCSWLLTFNLKGI 132
           F GPLL KLILSNP I  R+LDSQLKPSFFFLKEI+ESDE+ TA+I    WLL  + KGI
Sbjct: 113 FVGPLLSKLILSNPRIFYRNLDSQLKPSFFFLKEILESDEQVTAAIRHSPWLLISDFKGI 172

Query: 133 LKPNTDLLVREGIASRSIAKLIVKEPRTIMQKVDRMIQVVKMVKELGIEPKSGMFVRALK 192
           LK N D+L  EG+ SR+IAKLIV   RTIM+KVDRMI+VVK VKELGIEPK+GMFV AL+
Sbjct: 173 LKSNIDVLASEGVPSRNIAKLIVSNSRTIMRKVDRMIEVVKTVKELGIEPKAGMFVHALR 232

Query: 193 IRCSMSDSNWKKKINVMKSLGWSEKEIFTAFKKEPKYLGCSEEKLRDVADFCFNTAKLDP 252
           IRCS+SDS WKKKINVMKSLGWSE EIFTAFKK+P +LGCSEEK+RDVADFCFNTAKLDP
Sbjct: 233 IRCSVSDSTWKKKINVMKSLGWSETEIFTAFKKDPSFLGCSEEKMRDVADFCFNTAKLDP 292

Query: 253 ETVISYPTLFMSALDK-LRPRYKVLEVLKVKSLLKNIKIPRMLVGGEREFVEKYVVKHLN 312
            +VI  P +F  ++DK L+PRYKVLEVLKVK+LLKN+ I  +LV  ER FV+K+VV+HL+
Sbjct: 293 GSVIICPKIFKCSVDKRLQPRYKVLEVLKVKNLLKNVNIAWVLVQSERAFVKKFVVRHLD 352

Query: 313 EIPNLMDIYRGNVTTGTKSVL 333
           EIPNLMDIYRGNVT  TKSVL
Sbjct: 353 EIPNLMDIYRGNVTAETKSVL 373

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BLAST of MELO3C034054 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.7e-10
Identity = 41/150 (27.33%), Postives = 74/150 (49.33%), Query Frame = 0


Query: 23  QKYETVIGFLQSHGFENSQIAKLVSRQPSVLHNKVSTNLKPKFEFLQEIGFD-GPLLPKL 82
           +K   ++ F Q+ G   +Q+ K++   P ++   + T L     FL  +G D   ++ K+
Sbjct: 112 EKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKV 171

Query: 83  ILSNPVILARSLDSQLKPSFFFLKEIVESDEKATAS-IWRCSWLLTFNLKGILKPNTDLL 142
           ++ NP ++  S+D +L+P+  FLK  V   E    S +     LL  ++  ILKPN D L
Sbjct: 172 LVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYL 231

Query: 143 VREGIASRSIAKLIVKEPRTIMQKVDRMIQ 171
              G     IA ++   P+ +++ V   +Q
Sbjct: 232 KECGFGDSQIATMVTGYPQILIKSVKNSLQ 261

[Close]

BLAST of MELO3C034054 vs. ExPASy Swiss-Prot
Match: B6TGN4 (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.3e-06
Identity = 47/253 (18.58%), Postives = 112/253 (44.27%), Query Frame = 0


Query: 28  VIGFLQSHGFENSQIAKLVSRQPSVLHNKVSTNLKPKFEFLQEIGFDGPLLPKLILSNPV 87
           V+ +LQ      + + +++ R P +L  K+   +     +L  IG     +  +I   P 
Sbjct: 174 VVKYLQGMDVRPTDVPRVLERYPELLGFKLEGTMSTSVAYLVGIGVGRRQVGSVITRFPE 233

Query: 88  ILARSLDSQLKPSFFFLKEIVESDEKATASIWRCSWLLTFNLKGILKPNTDLLVREGIAS 147
           +L   +   +KP    L+ I          I +  ++L F L+  +KPN + LV  G+  
Sbjct: 234 VLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYVLGFGLQEKVKPNIEALVDIGVRK 293

Query: 148 RSIAKLIVKEPRTI-MQKVDRMIQVVKMVKE--LGIEPKSGMFVRALKIRCSMSDSNWKK 207
            ++A ++++ P  + ++  D+++    + +   L      G  +  +    S+  +   K
Sbjct: 294 EALASIVMQYPDVLGLELRDKLVAQQSLFESSILVSREDFGRVLERMPQAISLGRAAVLK 353

Query: 208 KINVMKSLGWSEKEIFTAFKKEPKYLGCSEEKLRDVADFCFNTAKLDPETVISYPTLFMS 267
            +N + + G+   ++       P+ L  + + +R   ++  N  + D E ++ +P  F  
Sbjct: 354 HVNFLTACGFMLSQVSKMVVACPQLLALNIDIMRMNFEYFKNEMERDLEELVEFPAFFTY 413

Query: 268 ALDK-LRPRYKVL 277
            ++  +RPR++++
Sbjct: 414 GIESTVRPRHEMV 426

[Close]

BLAST of MELO3C034054 vs. ExPASy Swiss-Prot
Match: Q6AUK6 (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.1e-06
Identity = 48/253 (18.97%), Postives = 109/253 (43.08%), Query Frame = 0


Query: 28  VIGFLQSHGFENSQIAKLVSRQPSVLHNKVSTNLKPKFEFLQEIGFDGPLLPKLILSNPV 87
           V+ +LQ        + +++ R P +L  K+   +     +L  IG     +  +I   P 
Sbjct: 183 VVKYLQGMDVRPHDVPRVLERYPELLGFKLEGTMSTSIAYLVGIGVARRQVGSVITRFPE 242

Query: 88  ILARSLDSQLKPSFFFLKEIVESDEKATASIWRCSWLLTFNLKGILKPNTDLLVREGIAS 147
           +L   +   +KP    L+ I          I +  ++L F L+  +KPN + L+  G+  
Sbjct: 243 VLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYVLGFGLEDKVKPNIEALLEFGVRK 302

Query: 148 RSIAKLIVKEPRTIMQKVDRMIQVVKMVKELGIEPKS---GMFVRALKIRCSMSDSNWKK 207
            ++A ++ + P  +  ++   +   + + E  I   S   G  +  +    S+  +   K
Sbjct: 303 EALAFIVAQYPDILGIELRDKLATQQSLFESSILVSSEDFGRVIERMPQAISLGRTAVLK 362

Query: 208 KINVMKSLGWSEKEIFTAFKKEPKYLGCSEEKLRDVADFCFNTAKLDPETVISYPTLFMS 267
            +N + S G+   ++       P+ L  + + ++   ++  N  + D E ++ +P  F  
Sbjct: 363 HVNFLTSCGFLLSQVSKMVVACPQLLALNMDIMKMSFEYFQNEMERDLEELVEFPAFFTY 422

Query: 268 ALDK-LRPRYKVL 277
            L+  +RPR++++
Sbjct: 423 GLESTVRPRHEMV 435

[Close]

BLAST of MELO3C034054 vs. ExPASy Swiss-Prot
Match: Q9FK23 (Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF8 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.1e-06
Identity = 56/285 (19.65%), Postives = 129/285 (45.26%), Query Frame = 0


Query: 19  EKNSQKYETVIGFLQSHGFENSQIAKLVSRQPSVLHNKVSTNLKPKFEFLQEIGFDGPLL 78
           +K+ +  E +I FL+  G        +++R+P +L++ + + L P+ +F++ +  +    
Sbjct: 213 QKSVEDIERLISFLEPFGG-----IGIIARRPVILNSDLDSQLIPRVDFIRNLSGEDDFA 272

Query: 79  PKLILSN-PVILARSLDSQLKPSFFFLKEIVE-SDEKATASIWRCSWLLTFNLKGILKPN 138
              +L   P IL+ S++  +     FLK     + E+    +     +++ + +  L+P 
Sbjct: 273 TGTVLRRLPAILSYSVE-HMNGQVEFLKSFAGLTSEQVFKIVHVFPNVISTSKERKLRPR 332

Query: 139 TDLLVREGIASRSIAKLIVKEPRTIMQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCS 198
            + L   G  S  + K + K P  +    + +   +  + ++G + ++     A+     
Sbjct: 333 IEFLKECGFDSPGMFKFLSKAPLILALSENNLSHKLGFLVKIGYKHRTKELAFAMGAVTR 392

Query: 199 MSDSNWKKKINVMKSLGWSEKEIFTAFKKEPKYLGCSEEKLRDVADFCFNTAKLDPETVI 258
            S  N ++ I +  S G S ++I     K P+ L  +   L +  ++       + E ++
Sbjct: 393 TSSDNMQRVIGLYLSYGLSFEDILAMSTKHPQVLQYNYTSLEEKLEYLIEYMGREVEELL 452

Query: 259 SYPTLFMSALD-KLRPRYKVLEVLKVKSLLKNIKIPRML-VGGER 300
           ++P      LD +++ RY+     K+KS  +N+ + ++L V  ER
Sbjct: 453 AFPAFLGYKLDSRIKHRYEE----KLKSRGENMSLNKLLTVSAER 487

[Close]

BLAST of MELO3C034054 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.0e-05
Identity = 62/311 (19.94%), Postives = 128/311 (41.16%), Query Frame = 0


Query: 6   RISFFRRRKLQIDEKNS----------QKYETVIGFLQSHGFENSQIAKLVSRQPSVLHN 65
           R+ F  +  L I++ N+          +    V+ +L   G   S   + + R P VLH+
Sbjct: 150 RVEFLHKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVRKSTFTEFLRRYPQVLHS 209

Query: 66  KVSTNLKPKFEFLQEIGFDGPLLPKLILSNPVILARSLDSQLKPSFFFLKEIVESDEKAT 125
            V  +L P  ++LQ +      +P+++   P +L   L+  +  S  +L  I  +  +  
Sbjct: 210 SVVIDLAPVVKYLQGLDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIG 269

Query: 126 ASIWRCSWLLTFNLKGILKPNTDLLVREGIASRSIAKLIVKEPRTIMQKVDRMIQV-VKM 185
             + R   +L   +  I+KP  + L   GI   + A+LI K P  +  ++D  ++  V++
Sbjct: 270 GILTRYPEILGMRVARIIKPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQI 329

Query: 186 VKELGIEPKSGMFVRALKIRCSMSDSNWKKKINVMKSLGWS-----EKEIFTAFKKEPKY 245
           +++  +   S   + A        D   K K++  + L  S      +++ +  ++ P++
Sbjct: 330 LQDFNVRETSLPSIIAQYPEIIGID--LKPKLDTQRKLLCSAIHLNPEDLGSLIERMPQF 389

Query: 246 LGCSEEKLRDVADF---CFNTAKLDPETVISYPTLFMSALDKLRPRYKVLEVLKVKSLLK 298
           +  SE  +    DF   C  +     E VI  P +    L  ++  ++  +    + L  
Sbjct: 390 VSLSESPMLKHIDFLTKCGFSIDQTREMVIGCPQVLALNLGIMKLSFEYFQKEMKRPLQD 449

[Close]

BLAST of MELO3C034054 vs. ExPASy TrEMBL
Match: A0A5A7SXV5 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003270 PE=3 SV=1)

HSP 1 Score: 655.2 bits (1689), Expect = 1.4e-184
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0


Query: 1   MWACFRISFFRRRKLQIDEKNSQKYETVIGFLQSHGFENSQIAKLVSRQPSVLHNKVSTN 60
           MWACFRISFFRRRKLQIDEKNSQKYETVIGFLQSHGFENSQIAKLVSRQPSVLHNKVSTN
Sbjct: 1   MWACFRISFFRRRKLQIDEKNSQKYETVIGFLQSHGFENSQIAKLVSRQPSVLHNKVSTN 60

Query: 61  LKPKFEFLQEIGFDGPLLPKLILSNPVILARSLDSQLKPSFFFLKEIVESDEKATASIWR 120
           LKPKFEFLQEIGFDGPLLPKLILSNPVILARSLDSQLKPSFFFLKEIVESDEKATASIWR
Sbjct: 61  LKPKFEFLQEIGFDGPLLPKLILSNPVILARSLDSQLKPSFFFLKEIVESDEKATASIWR 120

Query: 121 CSWLLTFNLKGILKPNTDLLVREGIASRSIAKLIVKEPRTIMQKVDRMIQVVKMVKELGI 180
           CSWLLTFNLKGILKPNTDLLVREGIASRSIAKLIVKEPRTIMQKVDRMIQVVKMVKELGI
Sbjct: 121 CSWLLTFNLKGILKPNTDLLVREGIASRSIAKLIVKEPRTIMQKVDRMIQVVKMVKELGI 180

Query: 181 EPKSGMFVRALKIRCSMSDSNWKKKINVMKSLGWSEKEIFTAFKKEPKYLGCSEEKLRDV 240
           EPKSGMFVRALKIRCSMSDSNWKKKINVMKSLGWSEKEIFTAFKKEPKYLGCSEEKLRDV
Sbjct: 181 EPKSGMFVRALKIRCSMSDSNWKKKINVMKSLGWSEKEIFTAFKKEPKYLGCSEEKLRDV 240

Query: 241 ADFCFNTAKLDPETVISYPTLFMSALDKLRPRYKVLEVLKVKSLLKNIKIPRMLVGGERE 300
           ADFCFNTAKLDPETVISYPTLFMSALDKLRPRYKVLEVLKVKSLLKNIKIPRMLVGGERE
Sbjct: 241 ADFCFNTAKLDPETVISYPTLFMSALDKLRPRYKVLEVLKVKSLLKNIKIPRMLVGGERE 300

Query: 301 FVEKYVVKHLNEIPNLMDIYRGNVTTGTKSVL 333
           FVEKYVVKHLNEIPNLMDIYRGNVTTGTKSVL
Sbjct: 301 FVEKYVVKHLNEIPNLMDIYRGNVTTGTKSVL 332

[Close]

BLAST of MELO3C034054 vs. ExPASy TrEMBL
Match: A0A5D3CWR8 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003140 PE=3 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 8.6e-129
Identity = 244/322 (75.78%), Postives = 275/322 (85.40%), Query Frame = 0


Query: 13  RKLQIDEKNSQKYETVIGFLQSHGFENSQIAKLVSRQPSVLHNKVSTNLKPKFEFLQEIG 72
           RKLQ DEK+ Q+Y  VI FL+SHGFEN+QIA LVS++PS+L +KVSTNLKP+FEF QEIG
Sbjct: 53  RKLQFDEKHIQQYGAVIDFLKSHGFENTQIANLVSKRPSILQSKVSTNLKPRFEFFQEIG 112

Query: 73  FDGPLLPKLILSNPVILARSLDSQLKPSFFFLKEIVESDEKATASIWRCSWLLTFNLKGI 132
           F GPLLPKLILS P +L  SLDSQLKPSFFFLK+I+ESDE+ TA+I R   LL  +LKG 
Sbjct: 113 FIGPLLPKLILSTPWVLGSSLDSQLKPSFFFLKDILESDEQVTAAICRFPSLLVSDLKGN 172

Query: 133 LKPNTDLLVREGIASRSIAKLIVKEPRTIMQKVDRMIQVVKMVKELGIEPKSGMFVRALK 192
           LK N D+L  EG+ SR+IAK+I  +PRT+MQKVDRMIQVVK VKELGIEPK+  FV A++
Sbjct: 173 LKSNIDVLASEGVPSRNIAKMIEMDPRTVMQKVDRMIQVVKKVKELGIEPKTRKFVHAIR 232

Query: 193 IRCSMSDSNWKKKINVMKSLGWSEKEIFTAFKKEPKYLGCSEEKLRDVADFCFNTAKLDP 252
           IR S+SDS WKKKINVMKSLGWSE EI TAFKK+P YL CSEEKLRDV DFC NTAKLDP
Sbjct: 233 IRGSLSDSTWKKKINVMKSLGWSENEILTAFKKDPNYLSCSEEKLRDVTDFCLNTAKLDP 292

Query: 253 ETVISYPTLFMSALDK-LRPRYKVLEVLKVKSLLK-NIKIPRMLVGGEREFVEKYVVKHL 312
           ETVISYPTLFMSALDK LRPR+K+LE LKVKSLLK NIKIPR LV GEREFVE+YVVKHL
Sbjct: 293 ETVISYPTLFMSALDKRLRPRFKILEALKVKSLLKNNIKIPRALVRGEREFVERYVVKHL 352

Query: 313 NEIPNLMDIYRGNVTTGTKSVL 333
           ++IPNLMDIYRGNV T TKSVL
Sbjct: 353 DKIPNLMDIYRGNVATETKSVL 374

[Close]

BLAST of MELO3C034054 vs. ExPASy TrEMBL
Match: A0A1S3BEP9 (uncharacterized protein LOC103488811 OS=Cucumis melo OX=3656 GN=LOC103488811 PE=3 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 8.6e-129
Identity = 244/322 (75.78%), Postives = 275/322 (85.40%), Query Frame = 0


Query: 13  RKLQIDEKNSQKYETVIGFLQSHGFENSQIAKLVSRQPSVLHNKVSTNLKPKFEFLQEIG 72
           RKLQ DEK+ Q+Y  VI FL+SHGFEN+QIA LVS++PS+L +KVSTNLKP+FEF QEIG
Sbjct: 53  RKLQFDEKHIQQYGAVIDFLKSHGFENTQIANLVSKRPSILQSKVSTNLKPRFEFFQEIG 112

Query: 73  FDGPLLPKLILSNPVILARSLDSQLKPSFFFLKEIVESDEKATASIWRCSWLLTFNLKGI 132
           F GPLLPKLILS P +L  SLDSQLKPSFFFLK+I+ESDE+ TA+I R   LL  +LKG 
Sbjct: 113 FIGPLLPKLILSTPWVLGSSLDSQLKPSFFFLKDILESDEQVTAAICRFPSLLVSDLKGN 172

Query: 133 LKPNTDLLVREGIASRSIAKLIVKEPRTIMQKVDRMIQVVKMVKELGIEPKSGMFVRALK 192
           LK N D+L  EG+ SR+IAK+I  +PRT+MQKVDRMIQVVK VKELGIEPK+  FV A++
Sbjct: 173 LKSNIDVLASEGVPSRNIAKMIEMDPRTVMQKVDRMIQVVKKVKELGIEPKTRKFVHAIR 232

Query: 193 IRCSMSDSNWKKKINVMKSLGWSEKEIFTAFKKEPKYLGCSEEKLRDVADFCFNTAKLDP 252
           IR S+SDS WKKKINVMKSLGWSE EI TAFKK+P YL CSEEKLRDV DFC NTAKLDP
Sbjct: 233 IRGSLSDSTWKKKINVMKSLGWSENEILTAFKKDPNYLSCSEEKLRDVTDFCLNTAKLDP 292

Query: 253 ETVISYPTLFMSALDK-LRPRYKVLEVLKVKSLLK-NIKIPRMLVGGEREFVEKYVVKHL 312
           ETVISYPTLFMSALDK LRPR+K+LE LKVKSLLK NIKIPR LV GEREFVE+YVVKHL
Sbjct: 293 ETVISYPTLFMSALDKRLRPRFKILEALKVKSLLKNNIKIPRALVRGEREFVERYVVKHL 352

Query: 313 NEIPNLMDIYRGNVTTGTKSVL 333
           ++IPNLMDIYRGNV T TKSVL
Sbjct: 353 DKIPNLMDIYRGNVATETKSVL 374

[Close]

BLAST of MELO3C034054 vs. ExPASy TrEMBL
Match: A0A5D3CWA2 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002480 PE=3 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 9.5e-128
Identity = 240/321 (74.77%), Postives = 273/321 (85.05%), Query Frame = 0


Query: 13  RKLQIDEKNSQKYETVIGFLQSHGFENSQIAKLVSRQPSVLHNKVSTNLKPKFEFLQEIG 72
           RKLQ DEKN Q+YE VIGFL+SHG EN QIAKLVSR+P +L +KVSTNLKPKFEFLQEIG
Sbjct: 53  RKLQFDEKNIQQYEAVIGFLKSHGLENPQIAKLVSRKPWILQSKVSTNLKPKFEFLQEIG 112

Query: 73  FDGPLLPKLILSNPVILARSLDSQLKPSFFFLKEIVESDEKATASIWRCSWLLTFNLKGI 132
           F GPLL KLILSNP I  R+LDSQLKPSFFFLKEI+ESDE+ TA+I    WLL  + KGI
Sbjct: 113 FVGPLLSKLILSNPRIFYRNLDSQLKPSFFFLKEILESDEQVTAAIRHSPWLLISDFKGI 172

Query: 133 LKPNTDLLVREGIASRSIAKLIVKEPRTIMQKVDRMIQVVKMVKELGIEPKSGMFVRALK 192
           LK N D+L  EG+ SR+IAKLIV   RTIM+KVDRMI+VVK VKELGIEPK+GMFV AL+
Sbjct: 173 LKSNIDVLASEGVPSRNIAKLIVSNSRTIMRKVDRMIEVVKTVKELGIEPKAGMFVHALR 232

Query: 193 IRCSMSDSNWKKKINVMKSLGWSEKEIFTAFKKEPKYLGCSEEKLRDVADFCFNTAKLDP 252
           IRCS+SDS WKKKINVMKSLGWSE EIFTAFKK+P +LGCSEEK+RDVADFCFNTAKLDP
Sbjct: 233 IRCSVSDSTWKKKINVMKSLGWSETEIFTAFKKDPSFLGCSEEKMRDVADFCFNTAKLDP 292

Query: 253 ETVISYPTLFMSALDK-LRPRYKVLEVLKVKSLLKNIKIPRMLVGGEREFVEKYVVKHLN 312
            +VI  P +F  ++DK L+PRYKVLEVLKVK+LLKN+ I  +LV  ER FV+K+VV+HL+
Sbjct: 293 GSVIICPKIFKCSVDKRLQPRYKVLEVLKVKNLLKNVNIAWVLVQSERAFVKKFVVRHLD 352

Query: 313 EIPNLMDIYRGNVTTGTKSVL 333
           EIPNLMDIYRGNVT  TKSVL
Sbjct: 353 EIPNLMDIYRGNVTAETKSVL 373

[Close]

BLAST of MELO3C034054 vs. ExPASy TrEMBL
Match: A0A1S3BEQ3 (uncharacterized protein LOC103488865 OS=Cucumis melo OX=3656 GN=LOC103488865 PE=3 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 9.5e-128
Identity = 240/321 (74.77%), Postives = 273/321 (85.05%), Query Frame = 0


Query: 13  RKLQIDEKNSQKYETVIGFLQSHGFENSQIAKLVSRQPSVLHNKVSTNLKPKFEFLQEIG 72
           RKLQ DEKN Q+YE VIGFL+SHG EN QIAKLVSR+P +L +KVSTNLKPKFEFLQEIG
Sbjct: 53  RKLQFDEKNIQQYEAVIGFLKSHGLENPQIAKLVSRKPWILQSKVSTNLKPKFEFLQEIG 112

Query: 73  FDGPLLPKLILSNPVILARSLDSQLKPSFFFLKEIVESDEKATASIWRCSWLLTFNLKGI 132
           F GPLL KLILSNP I  R+LDSQLKPSFFFLKEI+ESDE+ TA+I    WLL  + KGI
Sbjct: 113 FVGPLLSKLILSNPRIFYRNLDSQLKPSFFFLKEILESDEQVTAAIRHSPWLLISDFKGI 172

Query: 133 LKPNTDLLVREGIASRSIAKLIVKEPRTIMQKVDRMIQVVKMVKELGIEPKSGMFVRALK 192
           LK N D+L  EG+ SR+IAKLIV   RTIM+KVDRMI+VVK VKELGIEPK+GMFV AL+
Sbjct: 173 LKSNIDVLASEGVPSRNIAKLIVSNSRTIMRKVDRMIEVVKTVKELGIEPKAGMFVHALR 232

Query: 193 IRCSMSDSNWKKKINVMKSLGWSEKEIFTAFKKEPKYLGCSEEKLRDVADFCFNTAKLDP 252
           IRCS+SDS WKKKINVMKSLGWSE EIFTAFKK+P +LGCSEEK+RDVADFCFNTAKLDP
Sbjct: 233 IRCSVSDSTWKKKINVMKSLGWSETEIFTAFKKDPSFLGCSEEKMRDVADFCFNTAKLDP 292

Query: 253 ETVISYPTLFMSALDK-LRPRYKVLEVLKVKSLLKNIKIPRMLVGGEREFVEKYVVKHLN 312
            +VI  P +F  ++DK L+PRYKVLEVLKVK+LLKN+ I  +LV  ER FV+K+VV+HL+
Sbjct: 293 GSVIICPKIFKCSVDKRLQPRYKVLEVLKVKNLLKNVNIAWVLVQSERAFVKKFVVRHLD 352

Query: 313 EIPNLMDIYRGNVTTGTKSVL 333
           EIPNLMDIYRGNVT  TKSVL
Sbjct: 353 EIPNLMDIYRGNVTAETKSVL 373

[Close]

BLAST of MELO3C034054 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 177.6 bits (449), Expect = 1.7e-44
Identity = 106/313 (33.87%), Postives = 166/313 (53.04%), Query Frame = 0


Query: 13  RKLQIDEKNSQKYETVIGFLQSHGFENSQIAKLVSRQPSVLHNKVSTNLKPKFEFLQEIG 72
           RKL +D  + ++  TV+  L+ HGF  +QI+ LV ++P +L     + L PK  F   IG
Sbjct: 91  RKLLLD--SPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKLSFFLSIG 150

Query: 73  FDGPLLPKLILSNPVILARSLDSQLKPSFFFLKEIVESDEKATASIWRCSWLLTFNLKGI 132
               LL + + S+P IL RSL +QL PS+ FLK +++SDEK  A++ R +W+   +    
Sbjct: 151 VSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKIVAALRRTTWVFLEDHTKN 210

Query: 133 LKPNTDLLVREGIASRSIAKLIVKEPRTIMQKVDRMIQVVKMVKELGIEPKSGMFVRALK 192
           L PN + +   G+  + I  L+   P  +MQK      + K  +E+G  P+   FV A+ 
Sbjct: 211 LVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKSTFVLAIH 270

Query: 193 IRCSMSD-SNWKKKINVMKSLGWSEKEIFTAFKKEPKYLGCSEEKLRDVADFCFNTAKLD 252
                 + S W K   V +  GWSE +I  AFKK P  +  SE K+    ++  N   + 
Sbjct: 271 ALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYFVNEMNMA 330

Query: 253 PETVISYP-TLFMSALDKLRPRYKVLEVLKVKSLLK-NIKIPRMLVGGEREFVEKYVVKH 312
           P ++   P  LF S   ++ PR  V +VL    L+K +  +  +LV  E+ F+EK V+K+
Sbjct: 331 PRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFLEKLVIKY 390

Query: 313 LNEIPNLMDIYRG 323
             E+P LM++Y G
Sbjct: 391 EEELPELMNLYLG 401

[Close]

BLAST of MELO3C034054 vs. TAIR 10
Match: AT1G62085.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 104.8 bits (260), Expect = 1.4e-22
Identity = 66/226 (29.20%), Postives = 123/226 (54.42%), Query Frame = 0


Query: 13  RKLQIDEKNSQKYETVIGFLQSHGFENSQIAKLVSRQPSVLHNKVSTNLKPKFEFLQEIG 72
           +K+  ++K +   ++V+  L+SHGF +SQI+ +++  P +L      ++ PK +FLQ  G
Sbjct: 77  KKVSFEDKGNP--DSVLSLLRSHGFTDSQISSIITDYPQLLVADAEKSIGPKLQFLQSRG 136

Query: 73  FDGPLLPKLILSNPVILARSLDSQLKPSFFFLKEIVESDEKATASIWRCSWLLTFNLKGI 132
                L  ++ + P IL +  D  +   + F+KEI+E+D+  ++   +    L    K  
Sbjct: 137 ASRSELTHIVSTVPEILGKRGDKTISIYYDFVKEIIEADK--SSKFEKLCHSLPEGSKQE 196

Query: 133 LKPNTDLLVRE-GIASRSIAKLIVKEPRTIMQKVDRMIQVVKMVKELGIEPKSGMFVRAL 192
            K    L++RE G+  R +  L++ + + +  K +   + +K V E+G +P +  FV+AL
Sbjct: 197 NKIRNVLVLRELGVPQRLLFPLLISDHQPVCGK-ENFEESLKKVVEMGFDPTTSKFVKAL 256

Query: 193 KIRCSMSDSNWKKKINVMKSLGWSEKEIFTAFKKEPKYLGCSEEKL 238
           ++     D   + K+NV KSLG+S  +++  FKK P +L  SE K+
Sbjct: 257 RVVYRFRDKTIEAKVNVCKSLGFSVGDVWAMFKKCPSFLNFSENKI 297

[Close]

BLAST of MELO3C034054 vs. TAIR 10
Match: AT1G61960.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 103.2 bits (256), Expect = 4.1e-22
Identity = 64/225 (28.44%), Postives = 124/225 (55.11%), Query Frame = 0


Query: 13  RKLQIDEKNSQKYETVIGFLQSHGFENSQIAKLVSRQPSVLHNKVSTNLKPKFEFLQEIG 72
           +K+  +E+ +   ++V+  L S+GF  SQI+ +++  P +L      ++ PK + LQ  G
Sbjct: 74  KKVSFEERRNP--DSVLSLLTSYGFTKSQISSIITIYPRLLALDAEKSIAPKLQSLQSRG 133

Query: 73  FDGPLLPKLILSNPVILARSLDSQLKPSFFFLKEIVESDEKATASIWRCSWLLTFNLKGI 132
                L +++ + P IL +     +   + F+K+I+E+D K+++    C      N K  
Sbjct: 134 ASSSELTQIVSTVPKILGKRGHKSITVYYDFVKDIIEAD-KSSSYEKLCHSFPQGNKKNK 193

Query: 133 LKPNTDLLVREGIASRSIAKLIVKEPRTIMQKVDRMIQVVKMVKELGIEPKSGMFVRALK 192
           ++ N  +L   G+A R +  L++ + + +  K +R  + +K V E+G +P++  FV AL+
Sbjct: 194 IR-NISVLRELGVAQRLLFPLLISDGQPVCGK-ERFEESLKKVVEMGFDPETTKFVEALR 253

Query: 193 IRCSMSDSNWKKKINVMKSLGWSEKEIFTAFKKEPKYLGCSEEKL 238
           +   MSD   ++K+NV K LG+   +++  FKK P +L  SE+K+
Sbjct: 254 VIYRMSDKTIEEKVNVYKRLGFGVADVWAIFKKWPSFLSYSEKKI 293

[Close]

BLAST of MELO3C034054 vs. TAIR 10
Match: AT1G62010.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 102.4 bits (254), Expect = 6.9e-22
Identity = 94/358 (26.26%), Postives = 167/358 (46.65%), Query Frame = 0


Query: 8   SFFRRRKLQIDEKNSQKYETVIGFLQSHGFENSQIAKLVSRQPSVLHNKVSTNLKPKFEF 67
           SF    +L     +    ++V+  L+S+GF +SQI+ ++     VL +  +T+L  K +F
Sbjct: 53  SFLDSLRLATKLTDKGNSDSVLDLLRSYGFTDSQISSIIRSDSRVLIDNDATSLGSKLQF 112

Query: 68  LQEIGFDGPLLPKLILSNPVILARSLDSQLKPSFFFLKEIVESDEKATASIWRCSWLLTF 127
           LQ  G     L +++ + P IL +     L   + F+K I+E+D+ +          ++ 
Sbjct: 113 LQSRGASSSELTEVVSTVPKILGKREGKSLSRYYDFIKVIIEADKSSKYE------KISH 172

Query: 128 NLKGILKPNTDLLVRE-GIASRSIAKLIVKEPRTIMQKVDRMIQVVKMVKELGIEPKSGM 187
           +L    K    L++RE G+  + +  L++ + + +  K ++    +K V E+G +P +  
Sbjct: 173 SLAQGNKIRNILVLRELGVPQKRLLLLLISKSQPVCGK-EKFDASLKKVVEMGFDPTTST 232

Query: 188 FVRALKIRCSMSDSNWKKKINVMKSLGWSEKEIFTAFKKEPKYLGCSEEKL--------- 247
           FV AL +   MSD   ++KI V +S+G+S  +++  FKK P+ L  SE+K+         
Sbjct: 233 FVHALHMLYQMSDKTIEEKIRVYRSVGFSVDDVWAMFKKWPRSLTHSEKKVANSIETFLG 292

Query: 248 ----RDV----------------------ADFCFNTAKLDPETVISYPTLFMSALDKLR- 307
               RDV                       +F         + V S P +   +L+K   
Sbjct: 293 LGFSRDVFMMMFKRFPPCIGYSTEAVKKKTEFLVKEMNWPVKAVASIPQVLGYSLEKRTV 352

Query: 308 PRYKVLEVLKVKSLLKNIKIPRM---LVGGEREFVEKYVVKHLNE--IPNLMDIYRGN 324
           PR  V++VL  K LL++ ++P M   L      F+  YV KH ++  +  LM I+ GN
Sbjct: 353 PRCNVIKVLMSKGLLES-ELPPMSSVLTSTSESFLNLYVSKHDDKQLVAELMAIFTGN 402

[Close]

BLAST of MELO3C034054 vs. TAIR 10
Match: AT3G46950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 102.4 bits (254), Expect = 6.9e-22
Identity = 89/374 (23.80%), Postives = 163/374 (43.58%), Query Frame = 0


Query: 26  ETVIGFLQSHGFENSQIAKLVSRQPSVLHNKVSTNLKPKFEFLQEIGFDGPLLPKLILSN 85
           ++V+  L+S+GF++SQI++++   P +L      +L+PK +FL+  G     + +++ + 
Sbjct: 85  DSVLNLLRSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEIVSNV 144

Query: 86  PVILARSLDSQLKPSFFFLKEIVESDEKATASIWRCSWLLTFNLKGILKPNTDLLVREGI 145
           P IL +  +  +   + F+K+I++  +    S            KG    N  +L   G+
Sbjct: 145 PTILDKKGEESVSLYYDFVKDIMQDGKSLCIS-------CPEGKKGNRIRNISVLRELGV 204

Query: 146 ASRSIAKLIVKEPRTIMQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWKKK 205
             + +  L++   + +  K ++  + +K V ++G +P    FV AL +   MS+   ++K
Sbjct: 205 PQKLLFSLLISRYQPVCGK-EKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEEK 264

Query: 206 INVMKSLGWSEKEIFTAFKKEPKYLGCSEEK----------------------------- 265
           +NV K LG+SE EI+  FKK P +L  SE+K                             
Sbjct: 265 VNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKIILMFETLKKCGLVEEEIISVLKSRPQCI 324

Query: 266 -----------------------------------------LRDVADFCFNTAKLDPETV 325
                                                    LR   +          E V
Sbjct: 325 RSSEQKILDSIEMFLGLGFSRDDFKMMVKRYPCCTAYSGETLRKKFEVLVKMMNWPLEAV 384

The following BLAST results are available for this feature:

BLAST of MELO3C034054 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034097.1	3.0e-184	100.00	transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15822.1 t...	[more]
XP_011655506.2	5.0e-131	75.39	transcription termination factor MTERF9, chloroplastic-like [Cucumis sativus] >K...	[more]
XP_031741173.1	1.9e-130	75.78	uncharacterized protein LOC101219984 [Cucumis sativus] >KAE8648634.1 hypothetica...	[more]
XP_008445932.1	1.8e-128	75.78	PREDICTED: uncharacterized protein LOC103488811 [Cucumis melo] >KAA0034111.1 tra...	[more]
XP_008446011.1	2.0e-127	74.77	PREDICTED: uncharacterized protein LOC103488865 [Cucumis melo] >KAA0034174.1 tra...	[more]

BLAST of MELO3C034054 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZL6	2.7e-10	27.33	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
B6TGN4	2.3e-06	18.58	Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MT...	[more]
Q6AUK6	3.1e-06	18.97	Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja...	[more]
Q9FK23	3.1e-06	19.65	Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9ZT96	2.0e-05	19.94	Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of MELO3C034054 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SXV5	1.4e-184	100.00	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CWR8	8.6e-129	75.78	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BEP9	8.6e-129	75.78	uncharacterized protein LOC103488811 OS=Cucumis melo OX=3656 GN=LOC103488811 PE=...	[more]
A0A5D3CWA2	9.5e-128	74.77	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BEQ3	9.5e-128	74.77	uncharacterized protein LOC103488865 OS=Cucumis melo OX=3656 GN=LOC103488865 PE=...	[more]

BLAST of MELO3C034054 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	1.7e-44	33.87	Mitochondrial transcription termination factor family protein	[more]
AT1G62085.1	1.4e-22	29.20	Mitochondrial transcription termination factor family protein	[more]
AT1G61960.1	4.1e-22	28.44	Mitochondrial transcription termination factor family protein	[more]
AT1G62010.1	6.9e-22	26.26	Mitochondrial transcription termination factor family protein	[more]
AT3G46950.1	6.9e-22	23.80	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 220..251 e-value: 400.0 score: 6.9 coord: 151..181 e-value: 0.38 score: 19.8 coord: 79..110 e-value: 0.33 score: 20.0 coord: 43..74 e-value: 6.9E-5 score: 32.2 coord: 185..215 e-value: 270.0 score: 8.3 coord: 115..146 e-value: 13.0 score: 14.7 coord: 252..282 e-value: 17.0 score: 14.3
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 196..301 e-value: 1.1E-12 score: 47.6 coord: 30..238 e-value: 1.2E-30 score: 106.5
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 13..324
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 91..315 e-value: 4.8E-41 score: 142.7
None	No IPR available	PANTHER	PTHR13068:SF31	TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL-LIKE	coord: 13..324

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034054.1	MELO3C034054.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding