MELO3C034049.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C034049.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	F-box protein At2g35280-like
Location	chr10: 4689037 .. 4689913 (+)
RNA-Seq Expression	MELO3C034049.jh1
Synteny	MELO3C034049.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAACCAATACAAAAGAAAATCAGAAGTTTTGAACTCTCAGATTTCAACGTAAGTTTAACTCTTCGATATTGTGTTTATGGAATTAATTAGTTGTTTAGTTATTATTAATACAATTGTTAATTTTCTTTTCTTCTGATTTATTTTCACGCAGAAGATCGACAAAAAAGATGTGCAAACCCCTTTCTTCATCCCTCATTGTATCACTCCCGAACGATCTATTAATCGAAGTTCTTGCAAAAGTCGCAGCTTCTTCTTACGTTGACTTAGTACGAGCCAAATTAGCCACCAAACTTTTCCTCCATGCATCAAACGACAGATACATATTCCGACACGTGTCGCTTAAAAACGAAAGCTTTAGGAACCTTCTATGGAACAACACCCCCAAATTTTGGTCCTTTGTAGAAACTTGCAATAACAATAAAAATCCAGAGAGTCTATATCGAAAAGGAATGTTGGAATTTTTCACTCACTGTAACGAAGCTTCTGGATTGGCTTGTTTAAAACTATCGGCTCAAAAAGGGTACGTGGATGCTTGTTATGTATATGGTGTCGTTTTGTACGCAACCGATTTGGTAGATGAAGGACTTGCATATTTGAAGATGTGTGAAGTGAAATTAGGGAATAAGATGGCGGAATGTCGTCGGAGAGTTAAGGAGTTTGTTTGGTATTTTTGGGTAAAGAATAAGATTTCAGTATCGTCGAAAAAATATTGCAGTAATAAAATTAATTGTAGGGTTAATGAGAGAAGAAATGGTTGGGACTGGAAAGATGAAGACGACTATTATGGAGAACACACGTGTGAAGAGTGTAAATGGAAGAACGAGGTTTCGAGATTTTGTAATATGTTGAGAAGCGGAGGGTACAGTAATTAA

mRNA sequence

ATGGCGAACCAATACAAAAGAAAATCAGAAGTTTTGAACTCTCAGATTTCAACAAGATCGACAAAAAAGATGTGCAAACCCCTTTCTTCATCCCTCATTGTATCACTCCCGAACGATCTATTAATCGAAGTTCTTGCAAAAGTCGCAGCTTCTTCTTACGTTGACTTAGTACGAGCCAAATTAGCCACCAAACTTTTCCTCCATGCATCAAACGACAGATACATATTCCGACACGTGTCGCTTAAAAACGAAAGCTTTAGGAACCTTCTATGGAACAACACCCCCAAATTTTGGTCCTTTGTAGAAACTTGCAATAACAATAAAAATCCAGAGAGTCTATATCGAAAAGGAATGTTGGAATTTTTCACTCACTGTAACGAAGCTTCTGGATTGGCTTGTTTAAAACTATCGGCTCAAAAAGGGTACGTGGATGCTTGTTATGTATATGGTGTCGTTTTGTACGCAACCGATTTGGTAGATGAAGGACTTGCATATTTGAAGATGTGTGAAGTGAAATTAGGGAATAAGATGGCGGAATGTCGTCGGAGAGTTAAGGAGTTTGTTTGGTATTTTTGGGTAAAGAATAAGATTTCAGTATCGTCGAAAAAATATTGCAGTAATAAAATTAATTGTAGGGTTAATGAGAGAAGAAATGGTTGGGACTGGAAAGATGAAGACGACTATTATGGAGAACACACGTGTGAAGAGTGTAAATGGAAGAACGAGGTTTCGAGATTTTGTAATATGTTGAGAAGCGGAGGGTACAGTAATTAA

Coding sequence (CDS)

ATGGCGAACCAATACAAAAGAAAATCAGAAGTTTTGAACTCTCAGATTTCAACAAGATCGACAAAAAAGATGTGCAAACCCCTTTCTTCATCCCTCATTGTATCACTCCCGAACGATCTATTAATCGAAGTTCTTGCAAAAGTCGCAGCTTCTTCTTACGTTGACTTAGTACGAGCCAAATTAGCCACCAAACTTTTCCTCCATGCATCAAACGACAGATACATATTCCGACACGTGTCGCTTAAAAACGAAAGCTTTAGGAACCTTCTATGGAACAACACCCCCAAATTTTGGTCCTTTGTAGAAACTTGCAATAACAATAAAAATCCAGAGAGTCTATATCGAAAAGGAATGTTGGAATTTTTCACTCACTGTAACGAAGCTTCTGGATTGGCTTGTTTAAAACTATCGGCTCAAAAAGGGTACGTGGATGCTTGTTATGTATATGGTGTCGTTTTGTACGCAACCGATTTGGTAGATGAAGGACTTGCATATTTGAAGATGTGTGAAGTGAAATTAGGGAATAAGATGGCGGAATGTCGTCGGAGAGTTAAGGAGTTTGTTTGGTATTTTTGGGTAAAGAATAAGATTTCAGTATCGTCGAAAAAATATTGCAGTAATAAAATTAATTGTAGGGTTAATGAGAGAAGAAATGGTTGGGACTGGAAAGATGAAGACGACTATTATGGAGAACACACGTGTGAAGAGTGTAAATGGAAGAACGAGGTTTCGAGATTTTGTAATATGTTGAGAAGCGGAGGGTACAGTAATTAA

Protein sequence

MANQYKRKSEVLNSQISTRSTKKMCKPLSSSLIVSLPNDLLIEVLAKVAASSYVDLVRAKLATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPKFWSFVETCNNNKNPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYVDACYVYGVVLYATDLVDEGLAYLKMCEVKLGNKMAECRRRVKEFVWYFWVKNKISVSSKKYCSNKINCRVNERRNGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN

Homology

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BLAST of MELO3C034049.jh1 vs. NCBI nr
Match: KAE8648647.1 (hypothetical protein Csa_009058 [Cucumis sativus])

HSP 1 Score: 419 bits (1076), Expect = 4.47e-146
Identity = 209/258 (81.01%), Postives = 232/258 (89.92%), Query Frame = 0


Query: 1   MANQYKRKSEV-LNSQISTRSTKKMCKPLSSSLIVSLPNDLLIEVLAKVAASSYVDLVRA 60
           MANQ KRKSE   NSQISTR TKKMC+P SSSLIVSLPNDLLIEVLAKVAASSY+DLV+A
Sbjct: 1   MANQLKRKSEPSFNSQISTR-TKKMCRPFSSSLIVSLPNDLLIEVLAKVAASSYIDLVQA 60

Query: 61  KLATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPKFWSFVETCNNNKNPESLYRKGML 120
           KLATKLFLHASND YIF+HVSL+N+SFRNLLWNNTP+  SF+ET NNN+NPESLYRKG +
Sbjct: 61  KLATKLFLHASNDGYIFQHVSLENKSFRNLLWNNTPQSRSFMETLNNNENPESLYRKGTM 120

Query: 121 EFFTHCNEASGLACLKLSAQKGYVDACYVYGVVLYATDLVDEGLAYLKMCEVKLGNKMAE 180
           EFF+H  EASGL+ LK SAQKGYVDACYVYGVV+YA +L +EG+ YLKMCE KLGNKMAE
Sbjct: 121 EFFSHGKEASGLSYLKQSAQKGYVDACYVYGVVMYAANLKEEGVEYLKMCEAKLGNKMAE 180

Query: 181 CRRRVKEFVWYFWVKNKISVSSKKYCSNKINCRVNERRNGWDWKDEDDYYGEHTCEECKW 240
           CRRRVKEFVWYFW+KN+IS+S K+ CSN +NC+VNER NGWDWKDEDDYYGEHTCE+CKW
Sbjct: 181 CRRRVKEFVWYFWIKNRISMS-KEICSN-VNCKVNERSNGWDWKDEDDYYGEHTCEQCKW 240

Query: 241 KNEVSRFCNMLRSGGYSN 257
            NEV RFCNMLR GGYSN
Sbjct: 241 SNEVLRFCNMLRRGGYSN 255

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BLAST of MELO3C034049.jh1 vs. NCBI nr
Match: KAA0034134.1 (putative F-box protein [Cucumis melo var. makuwa] >TYK15785.1 putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 417 bits (1071), Expect = 5.30e-146
Identity = 206/234 (88.03%), Postives = 208/234 (88.89%), Query Frame = 0


Query: 24  MCKPLSSSLIVSLPNDLLIEVLAKVAASSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN 83
           MCKPLSS LIVSLPNDLLIEVLAKVA+SSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN
Sbjct: 1   MCKPLSSPLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN 60

Query: 84  ESFRNLLWNNTPKFWSFVETCNNNKNPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV 143
           ESFRNLLWNNTPKFWSFVETCNNN+NPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV
Sbjct: 61  ESFRNLLWNNTPKFWSFVETCNNNENPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV 120

Query: 144 DACYVYGVVLYATDLVDEGLAYLKMCEVKLGNKMAECRRRVKEFVWYFWVKNKISVSSKK 203
           DACYVYGVVLYA DLVDEGLAYLKMCEVKL NKMAECRRRVKEFVW              
Sbjct: 121 DACYVYGVVLYAADLVDEGLAYLKMCEVKLRNKMAECRRRVKEFVW-------------- 180

Query: 204 YCSNKINCRVNERRNGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN 257
                    VNERRNGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN
Sbjct: 181 ---------VNERRNGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN 211

[Close]

BLAST of MELO3C034049.jh1 vs. NCBI nr
Match: XP_038891683.1 (putative F-box protein At1g67623 [Benincasa hispida])

HSP 1 Score: 362 bits (929), Expect = 5.91e-124
Identity = 176/234 (75.21%), Postives = 198/234 (84.62%), Query Frame = 0


Query: 29  SSSLIVSLPNDLLIEVLAKVAASSYVDLVRAKLATKLFLHASNDRYIFRHVSLKNESFRN 88
           S S+I SLPNDLLIEVLAKVAASSY DLV+AKLATK FL  SN+ YIFRHVSL N  F  
Sbjct: 6   SPSVIKSLPNDLLIEVLAKVAASSYTDLVQAKLATKDFLEVSNEGYIFRHVSLGN--FSK 65

Query: 89  LLWNNTPKFWSFVETCNNNKNPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYVDACYV 148
           LLWNN+P+FWS +ETCNNN+NPESLYRKGMLEFFTHC EASGL  LK SA+K Y+DACYV
Sbjct: 66  LLWNNSPEFWSLIETCNNNENPESLYRKGMLEFFTHCREASGLGYLKRSAEKDYMDACYV 125

Query: 149 YGVVLYATDLVDEGLAYLKMCEVKLGNKMAECRRRVKEFVWYFWVKNKISVSSK-----K 208
           YGVVLYAT+L +EGL +L+ CE KLGNKM+ECRRRVKEFVW  W+KNK+S+S K     +
Sbjct: 126 YGVVLYATNLKEEGLQFLRNCEAKLGNKMSECRRRVKEFVWCLWIKNKVSLSEKEFGGRR 185

Query: 209 YCSNKI--NCRVNERRNGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGY 255
           YCSN I  NC +NE+RNGWDWKDEDD+YGEHTCEECKWK EVSRFCNMLR+G Y
Sbjct: 186 YCSNVIKNNCLINEKRNGWDWKDEDDHYGEHTCEECKWKGEVSRFCNMLRTGAY 237

[Close]

BLAST of MELO3C034049.jh1 vs. NCBI nr
Match: XP_004137554.1 (putative F-box protein At1g67623 [Cucumis sativus] >KGN63874.1 hypothetical protein Csa_013173 [Cucumis sativus])

HSP 1 Score: 359 bits (921), Expect = 2.11e-122
Identity = 182/259 (70.27%), Postives = 210/259 (81.08%), Query Frame = 0


Query: 3   NQYKRKSEVLNSQISTRSTKKMCKPLSSSLIVSLPNDLLIEVLAKVAASSYVDLVRAKLA 62
           NQ KR S  L++QIS  + K     LS ++I SLPNDLL EVLAKVA SSY+DL++AKLA
Sbjct: 4   NQPKRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKLA 63

Query: 63  TKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPKFWSFVETCNNNKNPESLYRKGMLEFF 122
           TK FL ASNDRYIF+HVSL N  FRNLLWNN+PKFWSF+ETCNN++NPESLYRKGMLEFF
Sbjct: 64  TKHFLEASNDRYIFQHVSLGN--FRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEFF 123

Query: 123 THCNEASGLACLKLSAQKGYVDACYVYGVVLYATDLVDEGLAYLKMCEVKLGNKMAECRR 182
           THC EASG+A LK SAQKGYVDACYV+GV+LYA++L DEGL +LK  EVKLGNKM ECR+
Sbjct: 124 THCKEASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECRQ 183

Query: 183 RVKEFVWYFWVKNKISVSSK-----KYCSNKINCRVNERRNGWDWKDEDDYYGEHTCEEC 242
           RVKEFV Y W+KNKIS+S       + C   INCRVNE+ N WD KDEDDYYG++TCEEC
Sbjct: 184 RVKEFVSYIWIKNKISLSEGDSSYGRKCDKNINCRVNEKINVWDSKDEDDYYGKYTCEEC 243

Query: 243 KWKNEVSRFCNMLRSGGYS 256
           KW NEV RFC MLR+G +S
Sbjct: 244 KWNNEVLRFCKMLRTGRFS 260

[Close]

BLAST of MELO3C034049.jh1 vs. NCBI nr
Match: XP_008453691.1 (PREDICTED: putative F-box protein At1g67623 [Cucumis melo])

HSP 1 Score: 352 bits (903), Expect = 1.08e-119
Identity = 181/260 (69.62%), Postives = 202/260 (77.69%), Query Frame = 0


Query: 1   MANQYKRKSEVLNSQISTRSTKKMCKPLSSSLIVSLPNDLLIEVLAKVAASSYVDLVRAK 60
           MAN  K KS   ++ IS  + K     LS ++I SLPNDLL EVLAKVAASSYVDLV+AK
Sbjct: 1   MANHPKTKSLPFHTLISRTTQKNRTGVLSPTVIKSLPNDLLTEVLAKVAASSYVDLVQAK 60

Query: 61  LATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPKFWSFVETCNNNKNPESLYRKGMLE 120
           LATK FL AS DRYIF+HVSL N  F N LWNN+P+FWSF+ETCNNN+NPESLYRKGMLE
Sbjct: 61  LATKQFLEASKDRYIFQHVSLGN--FENHLWNNSPEFWSFIETCNNNENPESLYRKGMLE 120

Query: 121 FFTHCNEASGLACLKLSAQKGYVDACYVYGVVLYATDLVDEGLAYLKMCEVKLGNKMAEC 180
           FFTHC EASGLA LKLSAQKGYVDACYV  V+LYA+   DEG  +LK  E KL NKMAEC
Sbjct: 121 FFTHCKEASGLAYLKLSAQKGYVDACYVCSVILYASKAKDEGFEFLKNHEAKLRNKMAEC 180

Query: 181 RRRVKEFVWYFWVKNKISVSSK----KYCSNKINCRVNERRNGWDWKDEDDYYGEHTCEE 240
           R RVK FV Y W+KN+IS S +    + C   INCRVNERRN WDWKDEDDYYGE+TCE+
Sbjct: 181 RWRVKRFVSYLWIKNRISSSGEDPNDRKCDKNINCRVNERRNSWDWKDEDDYYGEYTCEK 240

Query: 241 CKWKNEVSRFCNMLRSGGYS 256
           CKW NEV RFC MLR+G YS
Sbjct: 241 CKWNNEVFRFCKMLRTGRYS 258

[Close]

BLAST of MELO3C034049.jh1 vs. ExPASy Swiss-Prot
Match: Q9FXC7 (Putative F-box protein At1g67623 OS=Arabidopsis thaliana OX=3702 GN=At1g67623 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 5.6e-16
Identity = 69/240 (28.75%), Postives = 113/240 (47.08%), Query Frame = 0


Query: 11  VLNSQISTRSTKKMCKPLSSSLIVSLPNDLLIEVLAKVAASSYVDLVRAKLATKLFLHAS 70
           V++  +   S+ +  K  +S  + SLP DLL+E+ +   ASS   +   +L +K F    
Sbjct: 2   VVSLSLHASSSIRKSKTKASLCLDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRIC 61

Query: 71  NDRYIFRHVSLKNESFRNLLWNNTPKFWSFVETCNNNKNPESLYRKGMLEFFTHCNEASG 130
           +++Y+F  +SLK   F  L W+       F+E C  ++NPE+L++KG + +F    +  G
Sbjct: 62  DEKYVFYRLSLKEIEF--LPWHENSA--KFIERCTESRNPEALFQKGFINYFRDKLQDRG 121

Query: 131 LACLKLSAQKGYVDACYVYGVVLYAT--DLVDEGL----AYLKMCEVKLGNKMAECRRRV 190
           L  L  +A+KG  +A YVYGV+L         +G     + +K       N++ E R ++
Sbjct: 122 LEYLAEAAEKGIKEAKYVYGVILICLGGKTKQKGFEILSSVIKQLMSTTMNELVEFRYKI 181

Query: 191 KEFVWYFWVKNKISVSSKK--YCSNKINCRVNER------RNGWD-WKDEDDYYGEHTCE 236
           ++  + FW  +   V   K  Y S K  C    R        GW  + DE D      CE
Sbjct: 182 QKIRYGFWWSDNTVVEQLKTAYVSEKCKCDCKTRMLLLVMNRGWYLFGDETDLDFSSACE 237

[Close]

BLAST of MELO3C034049.jh1 vs. ExPASy Swiss-Prot
Match: Q1PEW8 (F-box protein At2g35280 OS=Arabidopsis thaliana OX=3702 GN=At2g35280 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.5e-05
Identity = 39/142 (27.46%), Postives = 70/142 (49.30%), Query Frame = 0


Query: 31  SLIVSLPNDLLIEVLAKVAASSYVDLVRAKLATKLFLHASNDRYIFRHVSLKNESFRNLL 90
           S + +LP DLL E++AK+   S  D     L+ K    ++ND  + + ++L     + L 
Sbjct: 9   SRLEALPQDLLREIVAKIGVKSAEDYHNCILSCKELGASANDERVLKTLNLALLVKKPL- 68

Query: 91  WNNTPKFWSFVETCNNNKNPESLYRKGMLEFFT--HCNEASGLACLKLSAQKGYVDACYV 150
             +  K    ++ C  N NP++ Y KG++ +F   HC+    L  + ++A  G  +A Y+
Sbjct: 69  --SCRKHLLIMKKCLANNNPDAHYIKGIIWYFNLDHCD--VDLHHIGIAANGGQKEAIYM 128

Query: 151 YGVVLYATDLVDEGLAYLKMCE 171
           Y ++L      +EG  Y+   E
Sbjct: 129 YAMLLLCRGRTEEGKTYMSQLE 145

[Close]

BLAST of MELO3C034049.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SSE7 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002890 PE=4 SV=1)

HSP 1 Score: 417 bits (1071), Expect = 2.57e-146
Identity = 206/234 (88.03%), Postives = 208/234 (88.89%), Query Frame = 0


Query: 24  MCKPLSSSLIVSLPNDLLIEVLAKVAASSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN 83
           MCKPLSS LIVSLPNDLLIEVLAKVA+SSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN
Sbjct: 1   MCKPLSSPLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN 60

Query: 84  ESFRNLLWNNTPKFWSFVETCNNNKNPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV 143
           ESFRNLLWNNTPKFWSFVETCNNN+NPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV
Sbjct: 61  ESFRNLLWNNTPKFWSFVETCNNNENPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV 120

Query: 144 DACYVYGVVLYATDLVDEGLAYLKMCEVKLGNKMAECRRRVKEFVWYFWVKNKISVSSKK 203
           DACYVYGVVLYA DLVDEGLAYLKMCEVKL NKMAECRRRVKEFVW              
Sbjct: 121 DACYVYGVVLYAADLVDEGLAYLKMCEVKLRNKMAECRRRVKEFVW-------------- 180

Query: 204 YCSNKINCRVNERRNGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN 257
                    VNERRNGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN
Sbjct: 181 ---------VNERRNGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN 211

[Close]

BLAST of MELO3C034049.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LS96 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025065 PE=4 SV=1)

HSP 1 Score: 359 bits (921), Expect = 1.02e-122
Identity = 182/259 (70.27%), Postives = 210/259 (81.08%), Query Frame = 0


Query: 3   NQYKRKSEVLNSQISTRSTKKMCKPLSSSLIVSLPNDLLIEVLAKVAASSYVDLVRAKLA 62
           NQ KR S  L++QIS  + K     LS ++I SLPNDLL EVLAKVA SSY+DL++AKLA
Sbjct: 4   NQPKRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKLA 63

Query: 63  TKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPKFWSFVETCNNNKNPESLYRKGMLEFF 122
           TK FL ASNDRYIF+HVSL N  FRNLLWNN+PKFWSF+ETCNN++NPESLYRKGMLEFF
Sbjct: 64  TKHFLEASNDRYIFQHVSLGN--FRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEFF 123

Query: 123 THCNEASGLACLKLSAQKGYVDACYVYGVVLYATDLVDEGLAYLKMCEVKLGNKMAECRR 182
           THC EASG+A LK SAQKGYVDACYV+GV+LYA++L DEGL +LK  EVKLGNKM ECR+
Sbjct: 124 THCKEASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECRQ 183

Query: 183 RVKEFVWYFWVKNKISVSSK-----KYCSNKINCRVNERRNGWDWKDEDDYYGEHTCEEC 242
           RVKEFV Y W+KNKIS+S       + C   INCRVNE+ N WD KDEDDYYG++TCEEC
Sbjct: 184 RVKEFVSYIWIKNKISLSEGDSSYGRKCDKNINCRVNEKINVWDSKDEDDYYGKYTCEEC 243

Query: 243 KWKNEVSRFCNMLRSGGYS 256
           KW NEV RFC MLR+G +S
Sbjct: 244 KWNNEVLRFCKMLRTGRFS 260

[Close]

BLAST of MELO3C034049.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BXN2 (putative F-box protein At1g67623 OS=Cucumis melo OX=3656 GN=LOC103494339 PE=4 SV=1)

HSP 1 Score: 352 bits (903), Expect = 5.22e-120
Identity = 181/260 (69.62%), Postives = 202/260 (77.69%), Query Frame = 0


Query: 1   MANQYKRKSEVLNSQISTRSTKKMCKPLSSSLIVSLPNDLLIEVLAKVAASSYVDLVRAK 60
           MAN  K KS   ++ IS  + K     LS ++I SLPNDLL EVLAKVAASSYVDLV+AK
Sbjct: 1   MANHPKTKSLPFHTLISRTTQKNRTGVLSPTVIKSLPNDLLTEVLAKVAASSYVDLVQAK 60

Query: 61  LATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPKFWSFVETCNNNKNPESLYRKGMLE 120
           LATK FL AS DRYIF+HVSL N  F N LWNN+P+FWSF+ETCNNN+NPESLYRKGMLE
Sbjct: 61  LATKQFLEASKDRYIFQHVSLGN--FENHLWNNSPEFWSFIETCNNNENPESLYRKGMLE 120

Query: 121 FFTHCNEASGLACLKLSAQKGYVDACYVYGVVLYATDLVDEGLAYLKMCEVKLGNKMAEC 180
           FFTHC EASGLA LKLSAQKGYVDACYV  V+LYA+   DEG  +LK  E KL NKMAEC
Sbjct: 121 FFTHCKEASGLAYLKLSAQKGYVDACYVCSVILYASKAKDEGFEFLKNHEAKLRNKMAEC 180

Query: 181 RRRVKEFVWYFWVKNKISVSSK----KYCSNKINCRVNERRNGWDWKDEDDYYGEHTCEE 240
           R RVK FV Y W+KN+IS S +    + C   INCRVNERRN WDWKDEDDYYGE+TCE+
Sbjct: 181 RWRVKRFVSYLWIKNRISSSGEDPNDRKCDKNINCRVNERRNSWDWKDEDDYYGEYTCEK 240

Query: 241 CKWKNEVSRFCNMLRSGGYS 256
           CKW NEV RFC MLR+G YS
Sbjct: 241 CKWNNEVFRFCKMLRTGRYS 258

[Close]

BLAST of MELO3C034049.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JRX4 (putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487258 PE=4 SV=1)

HSP 1 Score: 336 bits (862), Expect = 1.19e-113
Identity = 173/262 (66.03%), Postives = 199/262 (75.95%), Query Frame = 0


Query: 1   MANQYKRKSEVLNSQISTRSTKKMCKPLSSSLIVSLPNDLLIEVLAKVAASSYVDLVRAK 60
           MA   KRKS+ L SQIS R TK      S   I SLPNDLLIE+LAKVAASSY DLV+AK
Sbjct: 1   MAGSLKRKSQALGSQIS-RKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAK 60

Query: 61  LATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPKFWSFVETCNNNKNPESLYRKGMLE 120
           LATK FL AS+  YIF+H SL+N  F  LLWNN+ +FWSF+E CNNN NPE+LYRKGMLE
Sbjct: 61  LATKKFLEASSHNYIFQHASLEN--FHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLE 120

Query: 121 FFTHCNEASGLACLKLSAQKGYVDACYVYGVVLYATDLVDEGLAYLKMCEVKLGNKMAEC 180
           FFTHC EASG+  LK+SAQKGY +ACYVYG++LYAT + DEG+ +LK+CE KLG K+AEC
Sbjct: 121 FFTHCREASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAEC 180

Query: 181 RRRVKEFVWYFWVKNKISVSSK-----KYCSNKIN--CRVNERRNGWDWKDEDDYYGEHT 240
           RRRVKEFV + WVKNKISV  K     + C N I   C+ N RR GWDW DED+YYGE+T
Sbjct: 181 RRRVKEFVRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENT 240

Query: 241 CEECKWKNEVSRFCNMLRSGGY 255
           CE CKW  EV RFCNMLR+G Y
Sbjct: 241 CEACKWNGEVLRFCNMLRTGSY 259

[Close]

BLAST of MELO3C034049.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JRV1 (putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487244 PE=4 SV=1)

HSP 1 Score: 333 bits (855), Expect = 1.38e-112
Identity = 172/262 (65.65%), Postives = 198/262 (75.57%), Query Frame = 0


Query: 1   MANQYKRKSEVLNSQISTRSTKKMCKPLSSSLIVSLPNDLLIEVLAKVAASSYVDLVRAK 60
           MA   KRKS+ L S IS R TK      S   I SLPNDLLIE+LAKVAASSY DLV+AK
Sbjct: 1   MAGSLKRKSQSLGSHIS-RKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAK 60

Query: 61  LATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPKFWSFVETCNNNKNPESLYRKGMLE 120
           LATK FL AS+  YIF+H SL+N  F  LLWNN+ +FWSF+E CNNN NPE+LYRKGMLE
Sbjct: 61  LATKKFLEASSHNYIFQHASLEN--FHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLE 120

Query: 121 FFTHCNEASGLACLKLSAQKGYVDACYVYGVVLYATDLVDEGLAYLKMCEVKLGNKMAEC 180
           FFTHC EASG+  LK+SAQKGY +ACYVYG++LYAT + DEG+ +LK+CE KLG K+AEC
Sbjct: 121 FFTHCREASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAEC 180

Query: 181 RRRVKEFVWYFWVKNKISVSSK-----KYCSNKIN--CRVNERRNGWDWKDEDDYYGEHT 240
           RRRVKEFV + WVKNKISV  K     + C N I   C+ N RR GWDW DED+YYGE+T
Sbjct: 181 RRRVKEFVRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENT 240

Query: 241 CEECKWKNEVSRFCNMLRSGGY 255
           CE CKW  EV RFCNMLR+G Y
Sbjct: 241 CEACKWNGEVLRFCNMLRTGSY 259

[Close]

BLAST of MELO3C034049.jh1 vs. TAIR 10
Match: AT1G67623.1 (F-box family protein )

HSP 1 Score: 86.3 bits (212), Expect = 4.0e-17
Identity = 69/240 (28.75%), Postives = 113/240 (47.08%), Query Frame = 0


Query: 11  VLNSQISTRSTKKMCKPLSSSLIVSLPNDLLIEVLAKVAASSYVDLVRAKLATKLFLHAS 70
           V++  +   S+ +  K  +S  + SLP DLL+E+ +   ASS   +   +L +K F    
Sbjct: 2   VVSLSLHASSSIRKSKTKASLCLDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRIC 61

Query: 71  NDRYIFRHVSLKNESFRNLLWNNTPKFWSFVETCNNNKNPESLYRKGMLEFFTHCNEASG 130
           +++Y+F  +SLK   F  L W+       F+E C  ++NPE+L++KG + +F    +  G
Sbjct: 62  DEKYVFYRLSLKEIEF--LPWHENSA--KFIERCTESRNPEALFQKGFINYFRDKLQDRG 121

Query: 131 LACLKLSAQKGYVDACYVYGVVLYAT--DLVDEGL----AYLKMCEVKLGNKMAECRRRV 190
           L  L  +A+KG  +A YVYGV+L         +G     + +K       N++ E R ++
Sbjct: 122 LEYLAEAAEKGIKEAKYVYGVILICLGGKTKQKGFEILSSVIKQLMSTTMNELVEFRYKI 181

Query: 191 KEFVWYFWVKNKISVSSKK--YCSNKINCRVNER------RNGWD-WKDEDDYYGEHTCE 236
           ++  + FW  +   V   K  Y S K  C    R        GW  + DE D      CE
Sbjct: 182 QKIRYGFWWSDNTVVEQLKTAYVSEKCKCDCKTRMLLLVMNRGWYLFGDETDLDFSSACE 237

[Close]

BLAST of MELO3C034049.jh1 vs. TAIR 10
Match: AT1G74875.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G67623.1); Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.4 bits (163), Expect = 1.9e-11
Identity = 63/225 (28.00%), Postives = 98/225 (43.56%), Query Frame = 0


Query: 38  NDLLIEVLAKVAASSYVDLVRAKLATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPKF 97
           N   I ++  V +SS  +    +L +K F   SNDRYI + +SL       L W N  KF
Sbjct: 17  NMFQIHLVINVLSSSLSEFRNLQLVSKSFKRISNDRYILQRLSLNKIPL--LPWRNRKKF 76

Query: 98  WSFVETCNNNKNPESLYRKGMLEFF---THCNEAS-GLACLKLSAQKGYVDACYVYGVVL 157
            +F + C  + N E++YRKG++++F   +H  +   GL  +  +A  G  +A YVYG++L
Sbjct: 77  HNFFKRCRKSGNLEAIYRKGLVDYFHRDSHERQRDRGLKHIAKTANNGNQEAQYVYGLIL 136

Query: 158 YAT--DLVDEGLAYLKMCE--VKLGN---KMAECRRRVKEFVWYFWVKNKISVSSKKYCS 217
                     G   L      + L N   +M + R  ++   W  W +  +    K Y  
Sbjct: 137 ICLGGKTKQNGFKILSSLRKPLMLSNTIKEMEKHRTHIRNMWW--WGEPMMRHLQKSYVR 196

Query: 218 NKINC--RVNERRN---GWDWKDEDDYYGEHTCEECKWKNEVSRF 247
              NC  R     N      + ++DD      CE C   +EV  F
Sbjct: 197 ENCNCDGRTEIFPNYCFRHRFGEDDDMLTSSACEICLCHHEVKLF 237

[Close]

BLAST of MELO3C034049.jh1 vs. TAIR 10
Match: AT2G35280.1 (F-box family protein )

HSP 1 Score: 51.6 bits (122), Expect = 1.1e-06
Identity = 39/142 (27.46%), Postives = 70/142 (49.30%), Query Frame = 0


Query: 31  SLIVSLPNDLLIEVLAKVAASSYVDLVRAKLATKLFLHASNDRYIFRHVSLKNESFRNLL 90
           S + +LP DLL E++AK+   S  D     L+ K    ++ND  + + ++L     + L 
Sbjct: 9   SRLEALPQDLLREIVAKIGVKSAEDYHNCILSCKELGASANDERVLKTLNLALLVKKPL- 68

Query: 91  WNNTPKFWSFVETCNNNKNPESLYRKGMLEFFT--HCNEASGLACLKLSAQKGYVDACYV 150
             +  K    ++ C  N NP++ Y KG++ +F   HC+    L  + ++A  G  +A Y+
Sbjct: 69  --SCRKHLLIMKKCLANNNPDAHYIKGIIWYFNLDHCD--VDLHHIGIAANGGQKEAIYM 128

Query: 151 YGVVLYATDLVDEGLAYLKMCE 171
           Y ++L      +EG  Y+   E
Sbjct: 129 YAMLLLCRGRTEEGKTYMSQLE 145

The following BLAST results are available for this feature:

BLAST of MELO3C034049.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648647.1	4.47e-146	81.01	hypothetical protein Csa_009058 [Cucumis sativus]	[more]
KAA0034134.1	5.30e-146	88.03	putative F-box protein [Cucumis melo var. makuwa] >TYK15785.1 putative F-box pro...	[more]
XP_038891683.1	5.91e-124	75.21	putative F-box protein At1g67623 [Benincasa hispida]	[more]
XP_004137554.1	2.11e-122	70.27	putative F-box protein At1g67623 [Cucumis sativus] >KGN63874.1 hypothetical prot...	[more]
XP_008453691.1	1.08e-119	69.62	PREDICTED: putative F-box protein At1g67623 [Cucumis melo]	[more]

BLAST of MELO3C034049.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FXC7	5.6e-16	28.75	Putative F-box protein At1g67623 OS=Arabidopsis thaliana OX=3702 GN=At1g67623 PE...	[more]
Q1PEW8	1.5e-05	27.46	F-box protein At2g35280 OS=Arabidopsis thaliana OX=3702 GN=At2g35280 PE=2 SV=1	[more]

BLAST of MELO3C034049.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SSE7	2.57e-146	88.03	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3...	[more]
A0A0A0LS96	1.02e-122	70.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025065 PE=4 SV=1	[more]
A0A1S3BXN2	5.22e-120	69.62	putative F-box protein At1g67623 OS=Cucumis melo OX=3656 GN=LOC103494339 PE=4 SV...	[more]
A0A6J1JRX4	1.19e-113	66.03	putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487258 PE=...	[more]
A0A6J1JRV1	1.38e-112	65.65	putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487244 PE=...	[more]

BLAST of MELO3C034049.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67623.1	4.0e-17	28.75	F-box family protein	[more]
AT1G74875.1	1.9e-11	28.00	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT2G35280.1	1.1e-06	27.46	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33784:SF31	F-BOX PROTEIN	coord: 30..251
IPR040338	Putative F-box protein At1g67623-like	PANTHER	PTHR33784	OS05G0482100 PROTEIN	coord: 30..251
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 23..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034049.jh1.t1	MELO3C034049.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding