MELO3C033917 (gene) Melon (DHL92) v4

Overview


Name	MELO3C033917
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	CACTA en-spm transposon protein
Location	chr09: 14227061 .. 14230535 (-)
RNA-Seq Expression	MELO3C033917
Synteny	MELO3C033917

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCCTTGTCCCGACGCTTTTAGGGGGATTTCTCGACGCCGCCGCACTGCGTCGGGAAATCCCCTTTTTAATCGTTTCAGTTCTGTAATTTACAAAACTGAAACCGAGAGAGAAAACGAGAGGAGAAGCCGAGAGGGGAGAAGAGAGAATCGTCGTTCCCGTTCCGTGTTCTGCCGCCGTCGCTCGCCGTCGTCCCTTGCCGCCGTTTAGCCGCCGTCTGCCACTTTAGGTAAGTGGAAGTTTAAATTTTATTTAGTTTAAATTTAGATTTTTGTTGATTGATTTATCCATTTGTAATTTTTCTCCATCGTCCTCCCCTCCTCGTCCTATTTGGCCACCACCGGTCTCAATAAATGTTTGTTTGTTTTTTTCTTTTTTTGTTTCAAAGTTAAAAAAATGTATGTATTAAATTAACGTATATTCAAATTGTTCGCTAGATAGAGTTTATTGAAATTGTTTAAAGTTCTTTTTTGTTTTTGTTTTAGTTTTTCTTTAGTTAATTAGTTTTAGGATTAGTTTTAGAATTTAGATTTTGAAATAGTTTTAGGATATAGATTTTGAATTAGTTTTAGGTTTTAGTGTTGAATTTGAATTTGAAGTGGTTTTAGGATTTAAGATTGACGTTGAGATTAAAGTTGAAATTGAATTTGAGATTGATAAAAAAATTGAATGTGTAGAGATTTTTGAGGTTATATTGAATTGGGGGGGGGTGTTTATTGATTTTGAGATTGTGATTTAATTTGAATTTAAGATTGATTTTGAGATAAAGATTTAATTTGAATTTTGAATTTGAATTTAAATATGCATACGAATATGAATTTGAATTTCAATTCCAATTTGAATATATATATATATATATATATAGATACAATGTCTTCATTTATTGAGACCCTATTATATATATATCTTTGTCATGCCAACAAAAAGTGTCTTCATGCTCATTCTATCATTTTGTTTCTTTATGTATAATATAAACTTCTTTTTGATATCCTTCCATTATTCAATTCAATAATAAACTAGAAGCCAAGATATAATTTGTCCAAAATGCTCTCTATTTCATTTTCAACAACAACTACAACAATAATTATTATGAAATGGAATTACTACTTATCTGGGGAGAGGGAGGTTTAAGTTAAATTGAAAATGTTTGTTTTCTATGTCCATAGCCATTATGTCATATCGACGATCAAATTTTATGGAGACGGACGATATGTTCCTCCAGTTTGAGGACGATTTAGATAATAACATCGCAGAAGGGTCATCATCTGTGGGCGACAATACGGGTGAGTCTAAGAATTTTCTTCATTTTAACTTACAAATATTTCATGTTCTTTTTTCTAACTTTATATGTTATTATCGATTTATTGAGCAGAGTCTTCTTCTCAACAAGCGACTTCGACTCCTAGGAGACGTGCGCAGTCTCGACTTTTGGAGTTAGAGCGCCACGTTGCAATAAATAGACGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAGCCTATTTCTCCACACGCCGTTCGCTTCAGCCAGGCGATAGGCGTGTGCGTGCGAAAGACATTTCCCGTCCGCTGTCTTAAGTGGGCGGACGTTAGGAGAGAATACATTGAGGTCGTCAAGGGCGACCTCCAGGTAATTAAATGCACTACACATTTATATATGATTTCATTTGAAATATATCTAACTTTAACCAATCTAATGTGTTATGTTTGTAATGTGTAGCGATTGTTTGTGCTTGATTTCAATGATCAAGCAATGAACAGGTTTGTTGAGCATCAGATGCTCACGACCTTTAAAGAGTTCCGGGCCGACTGTCATAGACATTTCAAAAAGTACAGCGACCCGGAGGAGGCTCGTGCCAACCCACCAAACGCATTGGTTGGACGTGATGAGGATTGGCACTTCCTCTGCAACCATTATATCAGTCGTGCATTCCAGGTGTTTGTCATGATTAATTATGATAACAAGTTTTAATATGTATACGAAATAAACAATATAATTGTTTTAATGCAGGAGCAATCACGGACGAACAAGGCTGCTAGACAGAAGCAGCCTTACAATCATAGTAGCGGGTCCAAGTCGTTTCTACAACGACAGTATGAGCTCGCTGAAAGAAAAGGGGAGCCGGTCGATCGTGTGGAATTGTTTCGGGAAACACACGTTCGAGCTGGGACATTCGTGTCACAGGCCGCCGAGGATGCGCATGTAAGTTATGCCCTTATTAATTATCCACTTTCATTATATATTTTTGCGCGTTACCTAACATAGTTTTTAAATTTGTTGCAGAATCAAATGCTGGAACTCCAATCTCAGCCTACCCCAGAGGGTAGTCAGTCACTCTCTGAGGATGAGATATGTGATCAGGTGTTGGGTAGACGACCAGGCTACTCAAAAGGCCTTGGTTGGGGACCCAAGCCGAAGGCCCGCAGAACGGCGAGTGCAAGCAGTTCGTCGACATCTTGTTCGCAGTCCACAGAAAAAGAGATTGAATTACAAGCTAAACTTCAAGAAGCTTTGGAACGGATTGAAGTACAAGATAGAAATCACCAAGCATTAGCTTCACAAGTGGAAAGTATGAAAAAGATGATAGAAGAATTTACTCGTGCACAACAGGGACCACCACATGATCCCTAGCTCTGCGGTACGTATATGTCTTTATTATTCTTAAGTTTTTGCAAATATATGATTATGTACTAAATTTAGTTATTTTTATATCATTTTTAGGACCGAAGGTGTAGAATGACGCACATACGCACCTCGTTGGAAGACTTTTTCTTATGTTTATGTTTTTTCTATTTTGAGAACTATATTTATTGTAGTGAACTATATTTTCGTATTATTAATTTTAATTCTATTTTTTTAATTTGTGTTTGTATATTTCTTAATTTATTTTAATTTATATTCAATTTGTTTTAATTTAATCCAAAACGTCAGAAATTTTTTTCAGCAATCTGAACATCATTGTGAATGTTTGAGCAAAATATTATAAGGAAAAGTAGAAACAAAATATTAAAAAATATATATAAAAGGAATTCCCGACGCCGGTAGGTGCGCCGGCATAGCTTGCGTCGGGAATGCCTCTTTCCCGACGCAGGCTATACCGACGCTTAGTTAGGCGTCGGGAGAGGCTTTCCCGACGCCACGTTGGTATGGCGTCGGGAAAGCCTCTCCCGACGCATTTCTCCCGACGTTCTTCCCGACGCCGTTTGGTATGTCGGGAAAGGTTATCCCGACGTACTTTTCATTTTCGCCGACGTTTTTTGGCGTCGGGAGTACCCCCGTCTCTTGTAGTGATGGTGTGGTGGAGTGCAGGTATCCGCTTTCAAAAGTATGCAGTGCGAGGTGATGACGTTCTCATTGTCGATGCAAAAGTAGGATCAGTCTATAAATCCCTTCTTCAAGGACTTGGGGTTGCGGTATTGCTAGCAAAATCCCTTATCTCGAATAGCGGATGCATAGAGTTTGCCAAGAAGTGA

mRNA sequence

ATGCCCCTTGTCCCGACGCTTTTAGGGGGATTTCTCGACGCCGCCGCACTGCGTCGGGAAATCCCCTTTTTAATCGTTTCAGTTCTAAAACGAGAGGAGAAGCCGAGAGGGGAGAAGAGAGAATCGTCGTTCCCGTTCCGTGTTCTGCCGCCGTCGCTCGCCGTCGTCCCTTGCCGCCGTTTAGCCGCCGTCTGCCACTTTAGATTTTTGTTGATTGATTTATCCATTTGTAATTTTTCTCCATCGTCCTCCCCTCCTCGTCCTATTTGGCCACCACCGGTCTCAATAAATGATATAGATTTTGAATTAGTTTTAGGTTTTAGTGTTGAATTTGAATTTGAAGTGGTTTTAGGATTTAAGATTGACGTTGAGATTAAAGTTGAAATTGAATTTGAGATTGATAAAAAAATTGAATGTGTAGAGATTTTTGAGCGATTGTTTGTGCTTGATTTCAATGATCAAGCAATGAACAGGTTTGTTGAGCATCAGATGCTCACGACCTTTAAAGAGTTCCGGGCCGACTGTCATAGACATTTCAAAAAGTACAGCGACCCGGAGGAGGCTCGTGCCAACCCACCAAACGCATTGGTTGGACGTGATGAGGATTGGCACTTCCTCTGCAACCATTATATCAGTCGTGCATTCCAGGAGCAATCACGGACGAACAAGGCTGCTAGACAGAAGCAGCCTTACAATCATAGTAGCGGGTCCAAGTCGTTTCTACAACGACAGTATGAGCTCGCTGAAAGAAAAGGGGAGCCGGTCGATCGTGTGGAATTGTTTCGGGAAACACACGTTCGAGCTGGGACATTCGTGTCACAGGCCGCCGAGGATGCGCATAATCAAATGCTGGAACTCCAATCTCAGCCTACCCCAGAGGGTAGTATCCGCTTTCAAAAGTATGCAGTGCGAGGTGATGACGTTCTCATTGTCGATGCAAAAGTAGGATCAGTCTATAAATCCCTTCTTCAAGGACTTGGGGTTGCGGTATTGCTAGCAAAATCCCTTATCTCGAATAGCGGATGCATAGAGTTTGCCAAGAAGTGA

Coding sequence (CDS)

ATGCCCCTTGTCCCGACGCTTTTAGGGGGATTTCTCGACGCCGCCGCACTGCGTCGGGAAATCCCCTTTTTAATCGTTTCAGTTCTAAAACGAGAGGAGAAGCCGAGAGGGGAGAAGAGAGAATCGTCGTTCCCGTTCCGTGTTCTGCCGCCGTCGCTCGCCGTCGTCCCTTGCCGCCGTTTAGCCGCCGTCTGCCACTTTAGATTTTTGTTGATTGATTTATCCATTTGTAATTTTTCTCCATCGTCCTCCCCTCCTCGTCCTATTTGGCCACCACCGGTCTCAATAAATGATATAGATTTTGAATTAGTTTTAGGTTTTAGTGTTGAATTTGAATTTGAAGTGGTTTTAGGATTTAAGATTGACGTTGAGATTAAAGTTGAAATTGAATTTGAGATTGATAAAAAAATTGAATGTGTAGAGATTTTTGAGCGATTGTTTGTGCTTGATTTCAATGATCAAGCAATGAACAGGTTTGTTGAGCATCAGATGCTCACGACCTTTAAAGAGTTCCGGGCCGACTGTCATAGACATTTCAAAAAGTACAGCGACCCGGAGGAGGCTCGTGCCAACCCACCAAACGCATTGGTTGGACGTGATGAGGATTGGCACTTCCTCTGCAACCATTATATCAGTCGTGCATTCCAGGAGCAATCACGGACGAACAAGGCTGCTAGACAGAAGCAGCCTTACAATCATAGTAGCGGGTCCAAGTCGTTTCTACAACGACAGTATGAGCTCGCTGAAAGAAAAGGGGAGCCGGTCGATCGTGTGGAATTGTTTCGGGAAACACACGTTCGAGCTGGGACATTCGTGTCACAGGCCGCCGAGGATGCGCATAATCAAATGCTGGAACTCCAATCTCAGCCTACCCCAGAGGGTAGTATCCGCTTTCAAAAGTATGCAGTGCGAGGTGATGACGTTCTCATTGTCGATGCAAAAGTAGGATCAGTCTATAAATCCCTTCTTCAAGGACTTGGGGTTGCGGTATTGCTAGCAAAATCCCTTATCTCGAATAGCGGATGCATAGAGTTTGCCAAGAAGTGA

Protein sequence

MPLVPTLLGGFLDAAALRREIPFLIVSVLKREEKPRGEKRESSFPFRVLPPSLAVVPCRRLAAVCHFRFLLIDLSICNFSPSSSPPRPIWPPPVSINDIDFELVLGFSVEFEFEVVLGFKIDVEIKVEIEFEIDKKIECVEIFERLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALVGRDEDWHFLCNHYISRAFQEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAERKGEPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPTPEGSIRFQKYAVRGDDVLIVDAKVGSVYKSLLQGLGVAVLLAKSLISNSGCIEFAKK

Homology

[Close]

BLAST of MELO3C033917 vs. NCBI nr
Match: KAA0046232.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 373.2 bits (957), Expect = 2.4e-99
Identity = 207/300 (69.00%), Postives = 211/300 (70.33%), Query Frame = 0


Query: 134 DKKIECVEI----FERLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEAR 193
           D + E +E+     +RLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEAR
Sbjct: 95  DVRREYIEVVKGDLQRLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEAR 154

Query: 194 ANPPNALVGRDEDWHFLCNHYISRAFQEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAE 253
           ANPPNALVGRDEDWHFLCNHYISRAFQEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAE
Sbjct: 155 ANPPNALVGRDEDWHFLCNHYISRAFQEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAE 214

Query: 254 RKGEPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPTPEG--------------- 313
           RKGEPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPTPEG               
Sbjct: 215 RKGEPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPTPEGSQSLSEDEICDQVLG 274

Query: 314 ------------------------------------------------------------ 349
                                                                       
Sbjct: 275 RRPGYSKGLGWGPKPKARRTASASSSSTSCSQSTEKEIELQAKLQEALERIEVQDRNHQA 334

[Close]

BLAST of MELO3C033917 vs. NCBI nr
Match: KAA0060244.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 327.4 bits (838), Expect = 1.5e-85
Identity = 190/292 (65.07%), Postives = 200/292 (68.49%), Query Frame = 0


Query: 30  KREEKPRGEKRESSFPFRVLPPSLAVV----PCRRLAAVCHFRFLLI------------- 89
           KREEKPRGEKRESS PF VLP SLA V    PCR  AAVCHF   +I             
Sbjct: 71  KREEKPRGEKRESSSPFHVLPSSLAAVPCHRPCRHSAAVCHFSHYVISTTNFMETDDMFL 130

Query: 90  ----DLSICNFSPSSSPPRPIWPPPVSINDIDFELVLGFSVEFEFEVVLGFKIDVEIKVE 149
               DL       SSS                        +E E  V + ++I + I   
Sbjct: 131 QFEDDLDNNIVGESSSVGDNTESSSQQATPTPRRHAQSRLLELERHVAINWRIPMTIAPG 190

Query: 150 IEFEIDKKIECVEIFE-----RLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRHFKKYS 209
            E    K I    + +     RLFVL FNDQAMNRFVEHQMLTTFKEF ADCHRHFKKYS
Sbjct: 191 AE----KPISPHALLQPGDRRRLFVLHFNDQAMNRFVEHQMLTTFKEFWADCHRHFKKYS 250

Query: 210 DPEEARANPPNALVGRDEDWHFLCNHYISRAFQEQSRTNKAARQKQPYNHSSGSKSFLQR 269
           DPEEARANPPNALVGRDEDWHFLC+HYISRAFQEQS+TNK ARQKQ YNHSSGSKSFLQR
Sbjct: 251 DPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSQTNKTARQKQSYNHSSGSKSFLQR 310

Query: 270 QYELAERKGEPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPTPEGS 296
           QYELAERKGE VDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPTPEGS
Sbjct: 311 QYELAERKGESVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPTPEGS 358

[Close]

BLAST of MELO3C033917 vs. NCBI nr
Match: KAA0062346.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 316.6 bits (810), Expect = 2.6e-82
Identity = 189/293 (64.51%), Postives = 205/293 (69.97%), Query Frame = 0


Query: 30  KREEKPRGEKRESSFPFRVLPPSLAVV------PCRRLAAVCHFR--FLLIDLSICNFSP 89
           KREEKPRGEKRESS PFRV PPSLA V      P   LA + + R  F+  D     F  
Sbjct: 8   KREEKPRGEKRESSSPFRVPPPSLAAVLAAIQPPSATLAIMSYRRSNFMETDDMFLQFED 67

Query: 90  --------SSSPPRPIWPPPVSIND-IDFELVLGFSVEFEFEVVLGFKIDVEIKVEIEFE 149
                    SS         V+IN  I   +  G        VV  F   + + V   F 
Sbjct: 68  DLDNNIVGGSSSVGDNTERHVAINGRISMTIAPGAEKPISPHVV-RFSHAIGVCVRKTFP 127

Query: 150 I------DKKIECVEI----FERLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRHFKKY 209
           +      D   E +E+     +RLFVLDFNDQAMNRFVEHQMLTTFKEF+ADCHRHFKKY
Sbjct: 128 VCCLKWADVGREYIEVVKGDLQRLFVLDFNDQAMNRFVEHQMLTTFKEFQADCHRHFKKY 187

Query: 210 SDPEEARANPPNALVGRDEDWHFLCNHYISRAFQEQSRTNKAARQKQPYNHSSGSKSFLQ 269
           SDP+EARANPPNALV RDEDWHFLC+HYISRAFQEQSRTNKAARQKQPYNHSSGSK FLQ
Sbjct: 188 SDPKEARANPPNALVERDEDWHFLCDHYISRAFQEQSRTNKAARQKQPYNHSSGSKLFLQ 247

Query: 270 RQYELAERKGEPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPTPEGS 296
           +QYELAERKGEPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPT EG+
Sbjct: 248 QQYELAERKGEPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPTLEGN 299

[Close]

BLAST of MELO3C033917 vs. NCBI nr
Match: TYK26630.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 313.5 bits (802), Expect = 2.2e-81
Identity = 188/293 (64.16%), Postives = 204/293 (69.62%), Query Frame = 0


Query: 30  KREEKPRGEKRESSFPFRVLPPSLAVV------PCRRLAAVCHFR--FLLIDLSICNFSP 89
           KREEK RGEKRESS PFRV PPSLA V      P   LA + + R  F+  D     F  
Sbjct: 8   KREEKSRGEKRESSSPFRVPPPSLAAVLAAIQPPSATLAIMSYRRSNFMETDDMFLQFED 67

Query: 90  --------SSSPPRPIWPPPVSIND-IDFELVLGFSVEFEFEVVLGFKIDVEIKVEIEFE 149
                    SS         V+IN  I   +  G        VV  F   + + V   F 
Sbjct: 68  DLDNNIVGGSSSVGDNTERHVAINGRISMTIAPGAEKPISPHVV-RFSHAIGVCVRKTFP 127

Query: 150 I------DKKIECVEI----FERLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRHFKKY 209
           +      D   E +E+     +RLFVLDFNDQAMNRFVEHQMLTTFKEF+ADCHRHFKKY
Sbjct: 128 VCCLKWADVGREYIEVVKGDLQRLFVLDFNDQAMNRFVEHQMLTTFKEFQADCHRHFKKY 187

Query: 210 SDPEEARANPPNALVGRDEDWHFLCNHYISRAFQEQSRTNKAARQKQPYNHSSGSKSFLQ 269
           SDP+EARANPPNALV RDEDWHFLC+HYISRAFQEQSRTNKAARQKQPYNHSSGSK FLQ
Sbjct: 188 SDPKEARANPPNALVERDEDWHFLCDHYISRAFQEQSRTNKAARQKQPYNHSSGSKLFLQ 247

Query: 270 RQYELAERKGEPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPTPEGS 296
           +QYELAERKGEPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPT EG+
Sbjct: 248 QQYELAERKGEPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPTLEGN 299

[Close]

BLAST of MELO3C033917 vs. NCBI nr
Match: TYK21492.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 308.9 bits (790), Expect = 5.5e-80
Identity = 150/152 (98.68%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 144 ERLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALVGRDEDW 203
           +RLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALVGRDEDW
Sbjct: 264 QRLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALVGRDEDW 323

Query: 204 HFLCNHYISRAFQEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAERKGEPVDRVELFRE 263
           HFLC+HYISRAFQEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAERKGEPVDRVELFRE
Sbjct: 324 HFLCDHYISRAFQEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAERKGEPVDRVELFRE 383

Query: 264 THVRAGTFVSQAAEDAHNQMLELQSQPTPEGS 296
           THVRAGTFVSQAAEDAHNQMLELQSQPTPEGS
Sbjct: 384 THVRAGTFVSQAAEDAHNQMLELQSQPTPEGS 415

[Close]

BLAST of MELO3C033917 vs. ExPASy Swiss-Prot
Match: P92543 (Uncharacterized mitochondrial protein AtMg01110 OS=Arabidopsis thaliana OX=3702 GN=AtMg01110 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.2e-06
Identity = 26/57 (45.61%), Postives = 37/57 (64.91%), Query Frame = 0


Query: 292 PEGSIRFQKYAVRGDDVLIVDAKVGSVYKSLLQGLGVAVLLAKSLISNSGCIEFAKK 349
           P  +  F  YA+ GDD++I D  V   Y+SLL  L V +  AKS++S +GC+EFAK+
Sbjct: 119 PHQTRPFLDYALLGDDIVIADRSVAKEYRSLLDALQVDISDAKSIVSETGCLEFAKR 175

[Close]

BLAST of MELO3C033917 vs. ExPASy Swiss-Prot
Match: P92567 (Uncharacterized mitochondrial protein AtMg01410 OS=Arabidopsis thaliana OX=3702 GN=AtMg01410 PE=4 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 3.0e-04
Identity = 24/42 (57.14%), Postives = 29/42 (69.05%), Query Frame = 0


Query: 296 IRFQKYAVRGDDVLIVDAKVGSVYKSLLQGLGVAVLLAKSLI 338
           +RF  YAV GDDV+I D +V  VY+S L GLGV +   KSLI
Sbjct: 123 VRFTSYAVLGDDVVIADQEVAKVYESALGGLGVKISYQKSLI 164

[Close]

BLAST of MELO3C033917 vs. ExPASy TrEMBL
Match: A0A5A7TS43 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00270 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 1.1e-99
Identity = 207/300 (69.00%), Postives = 211/300 (70.33%), Query Frame = 0


Query: 134 DKKIECVEI----FERLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEAR 193
           D + E +E+     +RLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEAR
Sbjct: 95  DVRREYIEVVKGDLQRLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEAR 154

Query: 194 ANPPNALVGRDEDWHFLCNHYISRAFQEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAE 253
           ANPPNALVGRDEDWHFLCNHYISRAFQEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAE
Sbjct: 155 ANPPNALVGRDEDWHFLCNHYISRAFQEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAE 214

Query: 254 RKGEPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPTPEG--------------- 313
           RKGEPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPTPEG               
Sbjct: 215 RKGEPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPTPEGSQSLSEDEICDQVLG 274

Query: 314 ------------------------------------------------------------ 349
                                                                       
Sbjct: 275 RRPGYSKGLGWGPKPKARRTASASSSSTSCSQSTEKEIELQAKLQEALERIEVQDRNHQA 334

[Close]

BLAST of MELO3C033917 vs. ExPASy TrEMBL
Match: A0A5A7UYW5 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold386G00850 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 7.2e-86
Identity = 190/292 (65.07%), Postives = 200/292 (68.49%), Query Frame = 0


Query: 30  KREEKPRGEKRESSFPFRVLPPSLAVV----PCRRLAAVCHFRFLLI------------- 89
           KREEKPRGEKRESS PF VLP SLA V    PCR  AAVCHF   +I             
Sbjct: 71  KREEKPRGEKRESSSPFHVLPSSLAAVPCHRPCRHSAAVCHFSHYVISTTNFMETDDMFL 130

Query: 90  ----DLSICNFSPSSSPPRPIWPPPVSINDIDFELVLGFSVEFEFEVVLGFKIDVEIKVE 149
               DL       SSS                        +E E  V + ++I + I   
Sbjct: 131 QFEDDLDNNIVGESSSVGDNTESSSQQATPTPRRHAQSRLLELERHVAINWRIPMTIAPG 190

Query: 150 IEFEIDKKIECVEIFE-----RLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRHFKKYS 209
            E    K I    + +     RLFVL FNDQAMNRFVEHQMLTTFKEF ADCHRHFKKYS
Sbjct: 191 AE----KPISPHALLQPGDRRRLFVLHFNDQAMNRFVEHQMLTTFKEFWADCHRHFKKYS 250

Query: 210 DPEEARANPPNALVGRDEDWHFLCNHYISRAFQEQSRTNKAARQKQPYNHSSGSKSFLQR 269
           DPEEARANPPNALVGRDEDWHFLC+HYISRAFQEQS+TNK ARQKQ YNHSSGSKSFLQR
Sbjct: 251 DPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSQTNKTARQKQSYNHSSGSKSFLQR 310

Query: 270 QYELAERKGEPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPTPEGS 296
           QYELAERKGE VDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPTPEGS
Sbjct: 311 QYELAERKGESVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPTPEGS 358

[Close]

BLAST of MELO3C033917 vs. ExPASy TrEMBL
Match: A0A5A7V7F1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G001070 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 1.3e-82
Identity = 189/293 (64.51%), Postives = 205/293 (69.97%), Query Frame = 0


Query: 30  KREEKPRGEKRESSFPFRVLPPSLAVV------PCRRLAAVCHFR--FLLIDLSICNFSP 89
           KREEKPRGEKRESS PFRV PPSLA V      P   LA + + R  F+  D     F  
Sbjct: 8   KREEKPRGEKRESSSPFRVPPPSLAAVLAAIQPPSATLAIMSYRRSNFMETDDMFLQFED 67

Query: 90  --------SSSPPRPIWPPPVSIND-IDFELVLGFSVEFEFEVVLGFKIDVEIKVEIEFE 149
                    SS         V+IN  I   +  G        VV  F   + + V   F 
Sbjct: 68  DLDNNIVGGSSSVGDNTERHVAINGRISMTIAPGAEKPISPHVV-RFSHAIGVCVRKTFP 127

Query: 150 I------DKKIECVEI----FERLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRHFKKY 209
           +      D   E +E+     +RLFVLDFNDQAMNRFVEHQMLTTFKEF+ADCHRHFKKY
Sbjct: 128 VCCLKWADVGREYIEVVKGDLQRLFVLDFNDQAMNRFVEHQMLTTFKEFQADCHRHFKKY 187

Query: 210 SDPEEARANPPNALVGRDEDWHFLCNHYISRAFQEQSRTNKAARQKQPYNHSSGSKSFLQ 269
           SDP+EARANPPNALV RDEDWHFLC+HYISRAFQEQSRTNKAARQKQPYNHSSGSK FLQ
Sbjct: 188 SDPKEARANPPNALVERDEDWHFLCDHYISRAFQEQSRTNKAARQKQPYNHSSGSKLFLQ 247

Query: 270 RQYELAERKGEPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPTPEGS 296
           +QYELAERKGEPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPT EG+
Sbjct: 248 QQYELAERKGEPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPTLEGN 299

[Close]

BLAST of MELO3C033917 vs. ExPASy TrEMBL
Match: A0A5D3DTM2 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002740 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 1.1e-81
Identity = 188/293 (64.16%), Postives = 204/293 (69.62%), Query Frame = 0


Query: 30  KREEKPRGEKRESSFPFRVLPPSLAVV------PCRRLAAVCHFR--FLLIDLSICNFSP 89
           KREEK RGEKRESS PFRV PPSLA V      P   LA + + R  F+  D     F  
Sbjct: 8   KREEKSRGEKRESSSPFRVPPPSLAAVLAAIQPPSATLAIMSYRRSNFMETDDMFLQFED 67

Query: 90  --------SSSPPRPIWPPPVSIND-IDFELVLGFSVEFEFEVVLGFKIDVEIKVEIEFE 149
                    SS         V+IN  I   +  G        VV  F   + + V   F 
Sbjct: 68  DLDNNIVGGSSSVGDNTERHVAINGRISMTIAPGAEKPISPHVV-RFSHAIGVCVRKTFP 127

Query: 150 I------DKKIECVEI----FERLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRHFKKY 209
           +      D   E +E+     +RLFVLDFNDQAMNRFVEHQMLTTFKEF+ADCHRHFKKY
Sbjct: 128 VCCLKWADVGREYIEVVKGDLQRLFVLDFNDQAMNRFVEHQMLTTFKEFQADCHRHFKKY 187

Query: 210 SDPEEARANPPNALVGRDEDWHFLCNHYISRAFQEQSRTNKAARQKQPYNHSSGSKSFLQ 269
           SDP+EARANPPNALV RDEDWHFLC+HYISRAFQEQSRTNKAARQKQPYNHSSGSK FLQ
Sbjct: 188 SDPKEARANPPNALVERDEDWHFLCDHYISRAFQEQSRTNKAARQKQPYNHSSGSKLFLQ 247

Query: 270 RQYELAERKGEPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPTPEGS 296
           +QYELAERKGEPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPT EG+
Sbjct: 248 QQYELAERKGEPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPTLEGN 299

[Close]

BLAST of MELO3C033917 vs. ExPASy TrEMBL
Match: A0A5D3CIP7 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00760 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 2.7e-80
Identity = 150/152 (98.68%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 144 ERLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALVGRDEDW 203
           +RLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALVGRDEDW
Sbjct: 116 QRLFVLDFNDQAMNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALVGRDEDW 175

Query: 204 HFLCNHYISRAFQEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAERKGEPVDRVELFRE 263
           HFLC+HYISRAFQEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAERKGEPVDRVELFRE
Sbjct: 176 HFLCDHYISRAFQEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAERKGEPVDRVELFRE 235

Query: 264 THVRAGTFVSQAAEDAHNQMLELQSQPTPEGS 296
           THVRAGTFVSQAAEDAHNQMLELQSQPTPEGS
Sbjct: 236 THVRAGTFVSQAAEDAHNQMLELQSQPTPEGS 267

[Close]

BLAST of MELO3C033917 vs. TAIR 10
Match: AT2G07749.1 (Mitovirus RNA-dependent RNA polymerase )

HSP 1 Score: 54.3 bits (129), Expect = 2.3e-07
Identity = 26/57 (45.61%), Postives = 37/57 (64.91%), Query Frame = 0


Query: 292 PEGSIRFQKYAVRGDDVLIVDAKVGSVYKSLLQGLGVAVLLAKSLISNSGCIEFAKK 349
           P  +  F  YA+ GDD++I D  V   Y+SLL  L V +  AKS++S +GC+EFAK+
Sbjct: 114 PHQTRPFLDYALLGDDIVIADRSVAKEYRSLLDALQVDISDAKSIVSETGCLEFAKR 170

[Close]

BLAST of MELO3C033917 vs. TAIR 10
Match: ATMG01110.1 (Mitovirus RNA-dependent RNA polymerase )

HSP 1 Score: 54.3 bits (129), Expect = 2.3e-07
Identity = 26/57 (45.61%), Postives = 37/57 (64.91%), Query Frame = 0


Query: 292 PEGSIRFQKYAVRGDDVLIVDAKVGSVYKSLLQGLGVAVLLAKSLISNSGCIEFAKK 349
           P  +  F  YA+ GDD++I D  V   Y+SLL  L V +  AKS++S +GC+EFAK+
Sbjct: 119 PHQTRPFLDYALLGDDIVIADRSVAKEYRSLLDALQVDISDAKSIVSETGCLEFAKR 175

[Close]

BLAST of MELO3C033917 vs. TAIR 10
Match: ATMG01410.1 (open reading frame 204 )

HSP 1 Score: 47.8 bits (112), Expect = 2.1e-05
Identity = 24/42 (57.14%), Postives = 29/42 (69.05%), Query Frame = 0


Query: 296 IRFQKYAVRGDDVLIVDAKVGSVYKSLLQGLGVAVLLAKSLI 338
           +RF  YAV GDDV+I D +V  VY+S L GLGV +   KSLI
Sbjct: 123 VRFTSYAVLGDDVVIADQEVAKVYESALGGLGVKISYQKSLI 164

The following BLAST results are available for this feature:

BLAST of MELO3C033917 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046232.1	2.4e-99	69.00	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0060244.1	1.5e-85	65.07	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0062346.1	2.6e-82	64.51	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYK26630.1	2.2e-81	64.16	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYK21492.1	5.5e-80	98.68	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C033917 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92543	3.2e-06	45.61	Uncharacterized mitochondrial protein AtMg01110 OS=Arabidopsis thaliana OX=3702 ...	[more]
P92567	3.0e-04	57.14	Uncharacterized mitochondrial protein AtMg01410 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of MELO3C033917 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TS43	1.1e-99	69.00	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5A7UYW5	7.2e-86	65.07	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5A7V7F1	1.3e-82	64.51	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3DTM2	1.1e-81	64.16	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3CIP7	2.7e-80	98.68	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of MELO3C033917 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07749.1	2.3e-07	45.61	Mitovirus RNA-dependent RNA polymerase	[more]
ATMG01110.1	2.3e-07	45.61	Mitovirus RNA-dependent RNA polymerase	[more]
ATMG01410.1	2.1e-05	57.14	open reading frame 204	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008686	RNA-dependent RNA polymerase, mitoviral	PFAM	PF05919	Mitovir_RNA_pol	coord: 294..348 e-value: 3.7E-11 score: 42.9
IPR004252	Probable transposase, Ptta/En/Spm, plant	PFAM	PF03004	Transposase_24	coord: 200..289 e-value: 3.6E-19 score: 69.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..239
None	No IPR available	PANTHER	PTHR33499	FAMILY NOT NAMED	coord: 146..285

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C033917.1	MELO3C033917.1	mRNA