MELO3C033776 (gene) Melon (DHL92) v4

Overview
NameMELO3C033776
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptioncharged multivesicular body protein 7
Locationchr07: 7117160 .. 7117376 (+)
RNA-Seq ExpressionMELO3C033776
SyntenyMELO3C033776
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTAGTCGCAGTGCTATTTTTTGGCGTGAACAGTGGTAACAAAATGGAAAAAGTTCCAGACTGGGATGACGAAGTGCTGGCTACAGCCCGATTTAAGGTATTTAGTGGGCAGAAATCTGATTGGGAACCCAGGTACTTATTTTGGAGGGATTTGATACTCGCAGTTGCCCGTCAATTCAACTTCCTTATTATAAAACCTTCTGAAATAAAAAATCAAT

mRNA sequence

GTAGTCGCAGTGCTATTTTTTGGCGTGAACAGTGGTAACAAAATGGAAAAAGTTCCAGACTGGGATGACGAAGTGCTGGCTACAGCCCGATTTAAGGTATTTAGTGGGCAGAAATCTGATTGGGAACCCAGGTACTTATTTTGGAGGGATTTGATACTCGCAGTTGCCCGTCAATTCAACTTCCTTATTATAAAACCTTCTGAAATAAAAAATCAAT

Coding sequence (CDS)

ATGGAAAAAGTTCCAGACTGGGATGACGAAGTGCTGGCTACAGCCCGATTTAAGGTATTTAGTGGGCAGAAATCTGATTGGGAACCCAGGTACTTATTTTGGAGGGATTTGATACTCGCAGTTGCCCGTCAATTCAACTTCCTTATTATAAAACCTTCTGAAATAAAAAATCAA

Protein sequence

MEKVPDWDDEVLATARFKVFSGQKSDWEPRYLFWRDLILAVARQFNFLIIKPSEIKNQ
Homology
[Close]
BLAST of MELO3C033776 vs. NCBI nr
Match: KGN50975.2 (hypothetical protein Csa_017819 [Cucumis sativus])

HSP 1 Score: 119.4 bits (298), Expect = 1.0e-23
Identity = 54/57 (94.74%), Postives = 55/57 (96.49%), Query Frame = 0 

Query: 2  EKVPDWDDEVLATARFKVFSGQKSDWEPRYLFWRDLILAVARQFNFLIIKPSEIKNQ 59
          EKVPDWDDEV+ATARFK FSGQKSDWEPRYLFWRDLIL VARQFNFLIIKPSEIKNQ
Sbjct: 16 EKVPDWDDEVVATARFKAFSGQKSDWEPRYLFWRDLILTVARQFNFLIIKPSEIKNQ 72

[Close]
BLAST of MELO3C033776 vs. NCBI nr
Match: XP_011654554.1 (charged multivesicular body protein 7 [Cucumis sativus] >XP_031742319.1 charged multivesicular body protein 7 [Cucumis sativus] >XP_031742320.1 charged multivesicular body protein 7 [Cucumis sativus] >XP_031742321.1 charged multivesicular body protein 7 [Cucumis sativus] >XP_031742322.1 charged multivesicular body protein 7 [Cucumis sativus] >XP_031742323.1 charged multivesicular body protein 7 [Cucumis sativus] >XP_031742324.1 charged multivesicular body protein 7 [Cucumis sativus] >XP_031742325.1 charged multivesicular body protein 7 [Cucumis sativus] >XP_031742326.1 charged multivesicular body protein 7 [Cucumis sativus])

HSP 1 Score: 119.4 bits (298), Expect = 1.0e-23
Identity = 54/57 (94.74%), Postives = 55/57 (96.49%), Query Frame = 0 

Query: 2  EKVPDWDDEVLATARFKVFSGQKSDWEPRYLFWRDLILAVARQFNFLIIKPSEIKNQ 59
          EKVPDWDDEV+ATARFK FSGQKSDWEPRYLFWRDLIL VARQFNFLIIKPSEIKNQ
Sbjct: 16 EKVPDWDDEVVATARFKAFSGQKSDWEPRYLFWRDLILTVARQFNFLIIKPSEIKNQ 72

[Close]
BLAST of MELO3C033776 vs. NCBI nr
Match: KAA0050281.1 (charged multivesicular body protein 7 isoform X2 [Cucumis melo var. makuwa] >TYJ98126.1 charged multivesicular body protein 7 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 113.2 bits (282), Expect = 7.4e-22
Identity = 52/57 (91.23%), Postives = 53/57 (92.98%), Query Frame = 0 

Query: 2  EKVPDWDDEVLATARFKVFSGQKSDWEPRYLFWRDLILAVARQFNFLIIKPSEIKNQ 59
          EKV DWDDEV+ATARFK FSGQKSDWEPRYLFWRDLIL VARQ NFLIIKPSEIKNQ
Sbjct: 16 EKVLDWDDEVVATARFKAFSGQKSDWEPRYLFWRDLILTVARQLNFLIIKPSEIKNQ 72

[Close]
BLAST of MELO3C033776 vs. NCBI nr
Match: XP_008466468.1 (PREDICTED: charged multivesicular body protein 7 isoform X2 [Cucumis melo])

HSP 1 Score: 113.2 bits (282), Expect = 7.4e-22
Identity = 52/57 (91.23%), Postives = 53/57 (92.98%), Query Frame = 0 

Query: 2  EKVPDWDDEVLATARFKVFSGQKSDWEPRYLFWRDLILAVARQFNFLIIKPSEIKNQ 59
          EKV DWDDEV+ATARFK FSGQKSDWEPRYLFWRDLIL VARQ NFLIIKPSEIKNQ
Sbjct: 16 EKVLDWDDEVVATARFKAFSGQKSDWEPRYLFWRDLILTVARQLNFLIIKPSEIKNQ 72

[Close]
BLAST of MELO3C033776 vs. NCBI nr
Match: XP_008466425.1 (PREDICTED: charged multivesicular body protein 7 isoform X1 [Cucumis melo] >XP_008466434.1 PREDICTED: charged multivesicular body protein 7 isoform X1 [Cucumis melo] >XP_008466443.1 PREDICTED: charged multivesicular body protein 7 isoform X1 [Cucumis melo] >XP_008466452.1 PREDICTED: charged multivesicular body protein 7 isoform X1 [Cucumis melo] >XP_008466460.1 PREDICTED: charged multivesicular body protein 7 isoform X1 [Cucumis melo])

HSP 1 Score: 113.2 bits (282), Expect = 7.4e-22
Identity = 52/57 (91.23%), Postives = 53/57 (92.98%), Query Frame = 0 

Query: 2  EKVPDWDDEVLATARFKVFSGQKSDWEPRYLFWRDLILAVARQFNFLIIKPSEIKNQ 59
          EKV DWDDEV+ATARFK FSGQKSDWEPRYLFWRDLIL VARQ NFLIIKPSEIKNQ
Sbjct: 16 EKVLDWDDEVVATARFKAFSGQKSDWEPRYLFWRDLILTVARQLNFLIIKPSEIKNQ 72

[Close]
BLAST of MELO3C033776 vs. ExPASy TrEMBL
Match: A0A0A0KMY2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G118690 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.0e-24
Identity = 54/57 (94.74%), Postives = 55/57 (96.49%), Query Frame = 0 

Query: 2  EKVPDWDDEVLATARFKVFSGQKSDWEPRYLFWRDLILAVARQFNFLIIKPSEIKNQ 59
          EKVPDWDDEV+ATARFK FSGQKSDWEPRYLFWRDLIL VARQFNFLIIKPSEIKNQ
Sbjct: 16 EKVPDWDDEVVATARFKAFSGQKSDWEPRYLFWRDLILTVARQFNFLIIKPSEIKNQ 72

[Close]
BLAST of MELO3C033776 vs. ExPASy TrEMBL
Match: A0A1S3CRA4 (charged multivesicular body protein 7 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503835 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.6e-22
Identity = 52/57 (91.23%), Postives = 53/57 (92.98%), Query Frame = 0 

Query: 2  EKVPDWDDEVLATARFKVFSGQKSDWEPRYLFWRDLILAVARQFNFLIIKPSEIKNQ 59
          EKV DWDDEV+ATARFK FSGQKSDWEPRYLFWRDLIL VARQ NFLIIKPSEIKNQ
Sbjct: 16 EKVLDWDDEVVATARFKAFSGQKSDWEPRYLFWRDLILTVARQLNFLIIKPSEIKNQ 72

[Close]
BLAST of MELO3C033776 vs. ExPASy TrEMBL
Match: A0A5D3BGE9 (Charged multivesicular body protein 7 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00010 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.6e-22
Identity = 52/57 (91.23%), Postives = 53/57 (92.98%), Query Frame = 0 

Query: 2  EKVPDWDDEVLATARFKVFSGQKSDWEPRYLFWRDLILAVARQFNFLIIKPSEIKNQ 59
          EKV DWDDEV+ATARFK FSGQKSDWEPRYLFWRDLIL VARQ NFLIIKPSEIKNQ
Sbjct: 16 EKVLDWDDEVVATARFKAFSGQKSDWEPRYLFWRDLILTVARQLNFLIIKPSEIKNQ 72

[Close]
BLAST of MELO3C033776 vs. ExPASy TrEMBL
Match: A0A1S3CRC5 (charged multivesicular body protein 7 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503835 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.6e-22
Identity = 52/57 (91.23%), Postives = 53/57 (92.98%), Query Frame = 0 

Query: 2  EKVPDWDDEVLATARFKVFSGQKSDWEPRYLFWRDLILAVARQFNFLIIKPSEIKNQ 59
          EKV DWDDEV+ATARFK FSGQKSDWEPRYLFWRDLIL VARQ NFLIIKPSEIKNQ
Sbjct: 16 EKVLDWDDEVVATARFKAFSGQKSDWEPRYLFWRDLILTVARQLNFLIIKPSEIKNQ 72

[Close]
BLAST of MELO3C033776 vs. ExPASy TrEMBL
Match: A0A6J1FF90 (charged multivesicular body protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111444939 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.8e-21
Identity = 47/57 (82.46%), Postives = 53/57 (92.98%), Query Frame = 0 

Query: 2  EKVPDWDDEVLATARFKVFSGQKSDWEPRYLFWRDLILAVARQFNFLIIKPSEIKNQ 59
          EKVPDWD+E++ATARFK FSGQKSDWEPRYLFWRDLIL +A QFNF+ +KPSEIKNQ
Sbjct: 16 EKVPDWDNELVATARFKAFSGQKSDWEPRYLFWRDLILTIAHQFNFIFLKPSEIKNQ 72

[Close]
BLAST of MELO3C033776 vs. TAIR 10
Match: AT3G62080.1 (SNF7 family protein )

HSP 1 Score: 84.7 bits (208), Expect = 2.6e-17
Identity = 35/54 (64.81%), Postives = 44/54 (81.48%), Query Frame = 0 

Query: 3  KVPDWDDEVLATARFKVFSGQKSDWEPRYLFWRDLILAVARQFNFLIIKPSEIK 57
          +VPDWDDEV+A ARFK FSGQ+SDWE ++ FWRDLI+ V+RQF   II P ++K
Sbjct: 13 EVPDWDDEVVAMARFKAFSGQRSDWELKFQFWRDLIIKVSRQFGLFIIDPVQVK 66

[Close]
BLAST of MELO3C033776 vs. TAIR 10
Match: AT3G62080.2 (SNF7 family protein )

HSP 1 Score: 84.7 bits (208), Expect = 2.6e-17
Identity = 35/54 (64.81%), Postives = 44/54 (81.48%), Query Frame = 0 

Query: 3   KVPDWDDEVLATARFKVFSGQKSDWEPRYLFWRDLILAVARQFNFLIIKPSEIK 57
           +VPDWDDEV+A ARFK FSGQ+SDWE ++ FWRDLI+ V+RQF   II P ++K
Sbjct: 52  EVPDWDDEVVAMARFKAFSGQRSDWELKFQFWRDLIIKVSRQFGLFIIDPVQVK 105

The following BLAST results are available for this feature:
BLAST of MELO3C033776 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN50975.21.0e-2394.74hypothetical protein Csa_017819 [Cucumis sativus][more]
XP_011654554.11.0e-2394.74charged multivesicular body protein 7 [Cucumis sativus] >XP_031742319.1 charged ... [more]
KAA0050281.17.4e-2291.23charged multivesicular body protein 7 isoform X2 [Cucumis melo var. makuwa] >TYJ... [more]
XP_008466468.17.4e-2291.23PREDICTED: charged multivesicular body protein 7 isoform X2 [Cucumis melo][more]
XP_008466425.17.4e-2291.23PREDICTED: charged multivesicular body protein 7 isoform X1 [Cucumis melo] >XP_0... [more]
BLAST of MELO3C033776 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033776 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KMY25.0e-2494.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G118690 PE=4 SV=1[more]
A0A1S3CRA43.6e-2291.23charged multivesicular body protein 7 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A5D3BGE93.6e-2291.23Charged multivesicular body protein 7 isoform X2 OS=Cucumis melo var. makuwa OX=... [more]
A0A1S3CRC53.6e-2291.23charged multivesicular body protein 7 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A6J1FF901.8e-2182.46charged multivesicular body protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111444... [more]
BLAST of MELO3C033776 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G62080.12.6e-1764.81SNF7 family protein [more]
AT3G62080.22.6e-1764.81SNF7 family protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033776.1MELO3C033776.1mRNA