MELO3C033591 (gene) Melon (DHL92) v4

Overview


Name	MELO3C033591
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr10: 20759212 .. 20759603 (+)
RNA-Seq Expression	MELO3C033591
Synteny	MELO3C033591

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGATGTTGAGTTCAAAAGTTTTTATAACAAGAATGTTAATGCAAAACCCTTTCAAATCATCAAAGAATCAGAAGAGCATAAGGCTTCTACAAATAAGGAAATAAAAAGTATCCAAGTTCAAAATAATTATTCCAACAAAATGCTTTCTTCAATTGCAAGCCATGTTTTTTAAATTAGAAGAAATCATCAATCCTCCTTCTTTTGAAGAAACTCCTAGTCTCTTCCAACCTTTGGAAAAAGGTTAAGATAAAAACCCATAAACAAAATGCATATTAAATTAGAATAAATCATCAATCCTCCTTCACTTAAATGCATTTTTAGTGGTTTCTGAAATCGTACGAGGATTCGCCACTCGTTGAAAGAGCATTAGCCATCTTTTCGATCATT

mRNA sequence

ATGGAAGATGTTGAGTTCAAAAGTTTTTATAACAAGAATGTTAATGCAAAACCCTTTCAAATCATCAAAGAATCAGAAGAGCATAAGGCTTCTACAAATAAGGAAATAAAAAGTATCCAAGTTCAAAATAATTATTCCAACAAAATGCTTTCTTCAATTGCAAGCCATGTTTTTTAAATTAGAAGAAATCATCAATCCTCCTTCTTTTGAAGAAACTCCTAGTCTCTTCCAACCTTTGGAAAAAGGTTAAGATAAAAACCCATAAACAAAATGCATATTAAATTAGAATAAATCATCAATCCTCCTTCACTTAAATGCATTTTTAGTGGTTTCTGAAATCGTACGAGGATTCGCCACTCGTTGAAAGAGCATTAGCCATCTTTTCGATCATT

Coding sequence (CDS)

ATGGAAGATGTTGAGTTCAAAAGTTTTTATAACAAGAATGTTAATGCAAAACCCTTTCAAATCATCAAAGAATCAGAAGAGCATAAGGCTTCTACAAATAAGGAAATAAAAAGTATCCAAGTTCAAAATAATTATTCCAACAAAATGCTTTCTTCAATTGCAAGCCATGTTTTTTAA

Protein sequence

MEDVEFKSFYNKNVNAKPFQIIKESEEHKASTNKEIKSIQVQNNYSNKMLSSIASHVF

Homology

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BLAST of MELO3C033591 vs. NCBI nr
Match: XP_023520850.1 (uncharacterized protein LOC111784362 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 54.3 bits (129), Expect = 4.1e-04
Identity = 29/57 (50.88%), Postives = 41/57 (71.93%), Query Frame = 0


Query: 1   MEDVEFKSFYNKNVNAKPFQIIKESEEHKASTNKEIKSIQVQNNYSNKMLSSIASHV 58
           +E+VEF ++Y + V A PF+ I E  E    T K+IK+IQ QNNYSNK+LS+IA+ +
Sbjct: 104 LEEVEFDNYYGEKVKASPFKHIPEGLEKGNPTLKDIKNIQHQNNYSNKILSTIATQL 160

The following BLAST results are available for this feature:

BLAST of MELO3C033591 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023520850.1	4.1e-04	50.88	uncharacterized protein LOC111784362 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C033591 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C033591 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C033591 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 22..42

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C033591.1	MELO3C033591.1	mRNA