MELO3C033393.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C033393.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Descriptionphosphatidate phosphatase PAH2-like
Locationchr08: 23983491 .. 23985091 (-)
RNA-Seq ExpressionMELO3C033393.jh1
SyntenyMELO3C033393.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GATTTTATGGTTCTTGGCTTGCAACTAGTATATTACATTTTTCAATTAGTAAAAAATTTCATTTTTCCTCACTTAGATTACTTTTTTTGTTTTTTCGAACTTCTGCCAATCTATGAAGTATCATACTAGTTTCATTATCATCTAATTTTAACATTTACGAATAGTGATAGACTAAATTTAAAACTATAAGAGGATAAGATACAAAACTAGGACTTCTCAATTTAAGTCATTAAAGATTTGCTTATGTGTTATATGTCAATGATCATGTTTCTTGTTTTATGGTTCCCAGGAAAAACCAAGGATTATTAGATAAATATATTCTCTACTCGATTTTTGGGTTGAATTTGATAGAAGAGGAACTACAAGAGATCTTTGATAGCAACACTTCCCAATCCTCATGGTAAGAAAGTTTTGAAACTTACTTATTTTGCAATTGGATTCTATATATTATTTGAATTTTTGGAGTACGTAAAATTTTAAAGTGTTTGTTATTTTCTCATAACATTGGTTGCAACTTTTATTCTTGAAATAACTTTGAGAATGATGTTAACTTAATTTATCATGAACTCCGTTAGGGATAAAATAATGAGGTAATATATTGCATATGAAACAATAATTGTATAACTTACGTAGTTTGCTATTCATTATTAGAGCTTCCGAACTTGCAAGAAAGAAGAAGCCTTTGTGGAGGGTAATAAAGATATGGGGGTGGAGATTTAGTAAAAGAAAGAGGTAAGCGTGCTTTATGTTGTGTACGTAACTTAACTATTTTATTTTAGGAATCATGTTAACATGTACTTAGAATGTTGCTTTGACTATCCTGTAGTGGTAGCCATTGAAAATCTATTTTGTGCGATCCACTTAGACATATGTTTTAGGAATCATGTTGACACGTACTTAGAAACTTGATACTTTGTTTTGTTGACTATTTTGCAGTTATGGTAGTCATTGAAAAGCTATTTTGTTCAATCCGCTTATACATATGTTATAGGAATCATGTTGTTTTGTATTTACTTTGAAGAAGGGGGGCTAAGGGTAAGTTTATGCTAAGTTTAAACTTGATGCAAACTAGAACATTGCTTGGTCCGTAAAAATTGAATCGAAATTTACATTTGAAACATTTATATACAATGCTTATGCCGATGCTTATGTAGTCGGTATTAAAAACCTTGGTTGTATAAACTTTGGACGCTTATTTTGAAAAGTTTATTGGTCTGCTTATTAAGAAAATGATTTTTGTTTGACATGTACTTAATGTTTATGCTTATGTTTATGCATTTTTTCGTAATGAATGTTGGCTAAGGTTCATTTTCTTCAAATTTGCAGGTAGTTGAAGAATCCCATTGAGAAAACTTGTGCAGGTAGTCCAACAGAAGCAACCGTTGACCCAATTGGAAATTGGAAACTTTGCCCTCTCTCTTTTAAAAGATCTAATTCTAGGAAAGGAACTTATTGATGGATGCATAGATTTAGATATTAAGAAGGCCTCAAATAGAAATAATGGAATGGATGGAGAAGTAAGCATTGTTAAGCACAAGGTAGAGAAACATATGGTTAACCCTCTCACCGACATTAGAGCAGTTGGCATCCTTGAATCTTAA

mRNA sequence

GATTTTATGGTTCTTGGCTTGCAACTAAAGAGGAACTACAAGAGATCTTTGATAGCAACACTTCCCAATCCTCATGTTTGCTATTCATTATTAGAGCTTCCGAACTTGCAAGAAAGAAGAAGCCTTTGTGGAGGGAATCATGTTAACATGTACTTAGAATGTTGCTTTGACTATCCTGTAGTGGTAGCCATTGAAAATCTATTTTGTGCGATCCACTTAGACATATGTTTTAGGAATCATGTTGACACAATCCCATTGAGAAAACTTGTGCAGGTAGTCCAACAGAAGCAACCGTTGACCCAATTGGAAATTGGAAACTTTGCCCTCTCTCTTTTAAAAGATCTAATTCTAGGAAAGGAACTTATTGATGGATGCATAGATTTAGATATTAAGAAGGCCTCAAATAGAAATAATGGAATGGATGGAGAAGTAAGCATTGTTAAGCACAAGGTAGAGAAACATATGGTTAACCCTCTCACCGACATTAGAGCAGTTGGCATCCTTGAATCTTAA

Coding sequence (CDS)

ATGGTTCTTGGCTTGCAACTAAAGAGGAACTACAAGAGATCTTTGATAGCAACACTTCCCAATCCTCATGTTTGCTATTCATTATTAGAGCTTCCGAACTTGCAAGAAAGAAGAAGCCTTTGTGGAGGGAATCATGTTAACATGTACTTAGAATGTTGCTTTGACTATCCTGTAGTGGTAGCCATTGAAAATCTATTTTGTGCGATCCACTTAGACATATGTTTTAGGAATCATGTTGACACAATCCCATTGAGAAAACTTGTGCAGGTAGTCCAACAGAAGCAACCGTTGACCCAATTGGAAATTGGAAACTTTGCCCTCTCTCTTTTAAAAGATCTAATTCTAGGAAAGGAACTTATTGATGGATGCATAGATTTAGATATTAAGAAGGCCTCAAATAGAAATAATGGAATGGATGGAGAAGTAAGCATTGTTAAGCACAAGGTAGAGAAACATATGGTTAACCCTCTCACCGACATTAGAGCAGTTGGCATCCTTGAATCTTAA

Protein sequence

MVLGLQLKRNYKRSLIATLPNPHVCYSLLELPNLQERRSLCGGNHVNMYLECCFDYPVVVAIENLFCAIHLDICFRNHVDTIPLRKLVQVVQQKQPLTQLEIGNFALSLLKDLILGKELIDGCIDLDIKKASNRNNGMDGEVSIVKHKVEKHMVNPLTDIRAVGILES
Homology
[Close]
BLAST of MELO3C033393.jh1 vs. NCBI nr
Match: XP_008444630.1 (PREDICTED: phosphatidate phosphatase PAH2-like [Cucumis melo])

HSP 1 Score: 65.5 bits (158), Expect = 7.76e-09
Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 0 

Query: 120 IDGCIDLDIKKASNRNNGMDGEVSIVKHKVEKHMVNPLT 158
           +DGCID DIKKAS+RNNG+DGE SIV+HKVEK MV  L+
Sbjct: 741 VDGCIDFDIKKASDRNNGLDGEASIVRHKVEKKMVKSLS 779

[Close]
BLAST of MELO3C033393.jh1 vs. NCBI nr
Match: KAA0060884.1 (phosphatidate phosphatase PAH2-like [Cucumis melo var. makuwa])

HSP 1 Score: 65.5 bits (158), Expect = 7.95e-09
Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 0 

Query: 120 IDGCIDLDIKKASNRNNGMDGEVSIVKHKVEKHMVNPLT 158
           +DGCID DIKKAS+RNNG+DGE SIV+HKVEK MV  L+
Sbjct: 741 VDGCIDFDIKKASDRNNGLDGEASIVRHKVEKKMVKSLS 779

[Close]
BLAST of MELO3C033393.jh1 vs. NCBI nr
Match: XP_004152800.1 (phosphatidate phosphatase PAH2 [Cucumis sativus] >KGN62527.1 hypothetical protein Csa_021996 [Cucumis sativus])

HSP 1 Score: 64.7 bits (156), Expect = 1.47e-08
Identity = 29/39 (74.36%), Postives = 33/39 (84.62%), Query Frame = 0 

Query: 120 IDGCIDLDIKKASNRNNGMDGEVSIVKHKVEKHMVNPLT 158
           +DGCID DIKK S+RNNG+DGE SIVKHKVEK MV  L+
Sbjct: 743 VDGCIDFDIKKDSDRNNGLDGEASIVKHKVEKQMVKSLS 781

[Close]
BLAST of MELO3C033393.jh1 vs. NCBI nr
Match: XP_038884863.1 (phosphatidate phosphatase PAH2-like isoform X3 [Benincasa hispida])

HSP 1 Score: 57.0 bits (136), Expect = 6.65e-06
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 0 

Query: 120 IDGCIDLDIKKASNRNNGMDGEVSIVKHKVEKHMVNPLT 158
           +DG ID DIKKAS+RN G+DGE SI KHKVEK MV  L+
Sbjct: 762 VDGYIDFDIKKASDRNIGIDGEASIFKHKVEKQMVKSLS 800

[Close]
BLAST of MELO3C033393.jh1 vs. NCBI nr
Match: XP_038884861.1 (phosphatidate phosphatase PAH2-like isoform X2 [Benincasa hispida])

HSP 1 Score: 57.0 bits (136), Expect = 6.67e-06
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 0 

Query: 120 IDGCIDLDIKKASNRNNGMDGEVSIVKHKVEKHMVNPLT 158
           +DG ID DIKKAS+RN G+DGE SI KHKVEK MV  L+
Sbjct: 762 VDGYIDFDIKKASDRNIGIDGEASIFKHKVEKQMVKSLS 800

[Close]
BLAST of MELO3C033393.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BBL5 (phosphatidate phosphatase PAH2-like OS=Cucumis melo OX=3656 GN=LOC103487900 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.76e-09
Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 0 

Query: 120 IDGCIDLDIKKASNRNNGMDGEVSIVKHKVEKHMVNPLT 158
           +DGCID DIKKAS+RNNG+DGE SIV+HKVEK MV  L+
Sbjct: 741 VDGCIDFDIKKASDRNNGLDGEASIVRHKVEKKMVKSLS 779

[Close]
BLAST of MELO3C033393.jh1 vs. ExPASy TrEMBL
Match: A0A5A7V0N5 (Phosphatidate phosphatase PAH2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00170 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.85e-09
Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 0 

Query: 120 IDGCIDLDIKKASNRNNGMDGEVSIVKHKVEKHMVNPLT 158
           +DGCID DIKKAS+RNNG+DGE SIV+HKVEK MV  L+
Sbjct: 741 VDGCIDFDIKKASDRNNGLDGEASIVRHKVEKKMVKSLS 779

[Close]
BLAST of MELO3C033393.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LP52 (LNS2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G359960 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 7.11e-09
Identity = 29/39 (74.36%), Postives = 33/39 (84.62%), Query Frame = 0 

Query: 120 IDGCIDLDIKKASNRNNGMDGEVSIVKHKVEKHMVNPLT 158
           +DGCID DIKK S+RNNG+DGE SIVKHKVEK MV  L+
Sbjct: 743 VDGCIDFDIKKDSDRNNGLDGEASIVKHKVEKQMVKSLS 781

[Close]
BLAST of MELO3C033393.jh1 vs. ExPASy TrEMBL
Match: A0A6J1K7I4 (phosphatidate phosphatase PAH1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491862 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.87e-05
Identity = 24/38 (63.16%), Postives = 27/38 (71.05%), Query Frame = 0 

Query: 120 IDGCIDLDIKKASNRNNGMDGEVSIVKHKVEKHMVNPL 157
           +D  +D DIKK S+RNNGMDGE  I KHK EK MV  L
Sbjct: 747 VDDYVDFDIKKTSDRNNGMDGEARIFKHKAEKKMVKSL 784

[Close]
BLAST of MELO3C033393.jh1 vs. ExPASy TrEMBL
Match: A0A6J1K9F6 (phosphatidate phosphatase PAH1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491862 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.87e-05
Identity = 24/38 (63.16%), Postives = 27/38 (71.05%), Query Frame = 0 

Query: 120 IDGCIDLDIKKASNRNNGMDGEVSIVKHKVEKHMVNPL 157
           +D  +D DIKK S+RNNGMDGE  I KHK EK MV  L
Sbjct: 755 VDDYVDFDIKKTSDRNNGMDGEARIFKHKAEKKMVKSL 792

The following BLAST results are available for this feature:
BLAST of MELO3C033393.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008444630.17.76e-0974.36PREDICTED: phosphatidate phosphatase PAH2-like [Cucumis melo][more]
KAA0060884.17.95e-0974.36phosphatidate phosphatase PAH2-like [Cucumis melo var. makuwa][more]
XP_004152800.11.47e-0874.36phosphatidate phosphatase PAH2 [Cucumis sativus] >KGN62527.1 hypothetical protei... [more]
XP_038884863.16.65e-0669.23phosphatidate phosphatase PAH2-like isoform X3 [Benincasa hispida][more]
XP_038884861.16.67e-0669.23phosphatidate phosphatase PAH2-like isoform X2 [Benincasa hispida][more]
BLAST of MELO3C033393.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033393.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BBL53.76e-0974.36phosphatidate phosphatase PAH2-like OS=Cucumis melo OX=3656 GN=LOC103487900 PE=3... [more]
A0A5A7V0N53.85e-0974.36Phosphatidate phosphatase PAH2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A0A0LP527.11e-0974.36LNS2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G359960 PE=3 S... [more]
A0A6J1K7I46.87e-0563.16phosphatidate phosphatase PAH1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1K9F66.87e-0563.16phosphatidate phosphatase PAH1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LO... [more]
BLAST of MELO3C033393.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033393.jh1.t1MELO3C033393.jh1.t1mRNA