MELO3C033302 (gene) Melon (DHL92) v4

Overview


Name	MELO3C033302
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	CACTA en-spm transposon protein
Location	chr08: 17318718 .. 17319950 (-)
RNA-Seq Expression	MELO3C033302
Synteny	MELO3C033302

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTACATAAGGTACTATCCTACATGTGTTCGTATCTGCTTATTGAATGTTTGTTTTTTATGTCCACAGGCATTATGTCATACACACGTAATAATTTTCTGAAGACGGATACTATGTTCCTTGAGTTTAAGGATGATTTAGATAACCTTGCGGGAGGGTCATCGTCCGTGGGCGATAATGCGGGTGAGTCTAAGAATTTCATTCATTTTAACTTAGGATTATTTCATGTTTTTTTCTCTAACATTATATGTTATTATAATTTATTGAGCAGGGTCGTCTTCTCAACCACCTGCGACTCCGACTCCTAGGAGACGTGCGCAGTCTCGACTCTTAGTGTTGGAGCGCCACGTTGTTGTCAATGGGCGTATTTCGATGACGATTGCCCCTAGAGAGGAGAAGTCTACTTTCTCACACGCCGTTCGCTTCAGCCAGGTAATAGGCATGTGCGTGCGAAAGATATTTTCTGTCCGCTACTTTAAATGAGCAGACGTTGGCATAGAATACATTGAGGTCGTCAAGGGTGACCTCTAGGTAATTAAGTCCACTAAATATTTATGATTTCATTTGAAATATATCTAAGTTAACCAATCTAATGTGTTATTTTTGTAATGTGTAGTGGTTTTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTGTTAAGCATCAGATGCTCACCACCTTTAAGGAGTTTCGGGGCGATTGTCAGTCCTTTAAAAAGTACAGCGACCTCGAGGAGGCTCGTGCCAACCCACCAAACGTATTGGTTAGACGTCATGAGGATTAACACTTCCTCTGCGACCGCTACATGAGTCATGCATTCCAGGTATTTGTCATGCTTAATTATGATTTCAACTTTTAATATGTATAAGAAATAAACAATATTATTATTTTCATGCAAGAGCAATCACGGACGGACAAGGTTGCTAGATAGAAGCAGCCTTACAATCATAGTAGCGGGTCAAAGTTGTTTCTACAACGACAGCACAAGCTCGCTGAGAAAAAAGGGGAACTGATCGACCATGTGGAGTTGTTTCAAAAAACACATGTTTGAGCCGGGACGTTCGTGTCGCAGGCCACAAAGGATGCGCATGTAAGTTATTGATCCAACTCTTGTGTCCTTATTAATTATCCTCTTTCATTATATATTTTTGCGTTACCTAACTTAGTTTTTAAATTTGTTGCAGAATCAAATGCTGAAACTCTAGTCCCAGCCTACCCTAGAGGGTAG

mRNA sequence

TCTACATAAGGTACTATCCTACATGTGTTCGTATCTGCTTATTGAATGTTTGTTTTTTATGTCCACAGGCATTATGTCATACACACGTAATAATTTTCTGAAGACGGATACTATGTTCCTTGAGTTTAAGGATGATTTAGATAACCTTGCGGGAGGGTCATCGTCCGTGGGCGATAATGCGGGGTCGTCTTCTCAACCACCTGCGACTCCGACTCCTAGGAGACGTGCGCAGTCTCGACTCTTAGTGTTGGAGCGCCACGTTGTTGTCAATGGGCGTATTTCGATGACGATTGCCCCTAGAGAGGAGAAGTCTACTTTCTCACACGCCGTTCGCTTCAGCCAGTGGTTTTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTGTTAAGCATCAGATGCTCACCACCTTTAAGGAGTTTCGGGGCGATTGTCAGTCCTTTAAAAAGTACAGCGACCTCGAGGAGGCTCGTGCCAACCCACCAAACGTATTGAGCAATCACGGACGGACAAGGTTGCTAGATAGAAGCAGCCTTACAATCATAGTAGCGGAATCAAATGCTGAAACTCTAGTCCCAGCCTACCCTAGAGGGTAG

Coding sequence (CDS)

ATGTGTTCGTATCTGCTTATTGAATGTTTGTTTTTTATGTCCACAGGCATTATGTCATACACACGTAATAATTTTCTGAAGACGGATACTATGTTCCTTGAGTTTAAGGATGATTTAGATAACCTTGCGGGAGGGTCATCGTCCGTGGGCGATAATGCGGGGTCGTCTTCTCAACCACCTGCGACTCCGACTCCTAGGAGACGTGCGCAGTCTCGACTCTTAGTGTTGGAGCGCCACGTTGTTGTCAATGGGCGTATTTCGATGACGATTGCCCCTAGAGAGGAGAAGTCTACTTTCTCACACGCCGTTCGCTTCAGCCAGTGGTTTTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTGTTAAGCATCAGATGCTCACCACCTTTAAGGAGTTTCGGGGCGATTGTCAGTCCTTTAAAAAGTACAGCGACCTCGAGGAGGCTCGTGCCAACCCACCAAACGTATTGAGCAATCACGGACGGACAAGGTTGCTAGATAGAAGCAGCCTTACAATCATAGTAGCGGAATCAAATGCTGAAACTCTAGTCCCAGCCTACCCTAGAGGGTAG

Protein sequence

MCSYLLIECLFFMSTGIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNAGSSSQPPATPTPRRRAQSRLLVLERHVVVNGRISMTIAPREEKSTFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEFRGDCQSFKKYSDLEEARANPPNVLSNHGRTRLLDRSSLTIIVAESNAETLVPAYPRG

Homology

[Close]

BLAST of MELO3C033302 vs. NCBI nr
Match: KAA0067855.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 287.3 bits (734), Expect = 9.4e-74
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 16  GIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNAGSSSQPPATPTPRRRAQSRLLV 75
           GIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNAGSSSQPPATPTPRRRAQSRLLV
Sbjct: 44  GIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNAGSSSQPPATPTPRRRAQSRLLV 103

Query: 76  LERHVVVNGRISMTIAPREEKSTFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEFR 135
           LERHVVVNGRISMTIAPREEKSTFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEFR
Sbjct: 104 LERHVVVNGRISMTIAPREEKSTFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEFR 163

Query: 136 GDCQSFKKYSDLEEARANPPNVL 159
           GDCQSFKKYSDLEEARANPPNVL
Sbjct: 164 GDCQSFKKYSDLEEARANPPNVL 186

[Close]

BLAST of MELO3C033302 vs. NCBI nr
Match: TYK11059.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 234.2 bits (596), Expect = 9.4e-58
Identity = 122/146 (83.56%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 16  GIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNAGSSSQPPATPTPRRRAQSRLLV 75
           GIMSY RNNFLKTD MFLEFKDDLDNLAGGSSSVGDNA SSSQPPATPTP RRAQSRLLV
Sbjct: 44  GIMSYARNNFLKTDAMFLEFKDDLDNLAGGSSSVGDNAESSSQPPATPTPIRRAQSRLLV 103

Query: 76  LERHVVVNGRISMTIAPREEKSTFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEFR 135
           LERHVVVNGRISMTIAPREEKS FSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKE R
Sbjct: 104 LERHVVVNGRISMTIAPREEKSIFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEVR 163

Query: 136 GDCQSFKKYSDLEEARANPPNVLSNH 162
           GDC S  K      + A P  ++  H
Sbjct: 164 GDCHSPLK------STATPRRLMPTH 183

[Close]

BLAST of MELO3C033302 vs. NCBI nr
Match: KAA0067107.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYJ97490.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 214.5 bits (545), Expect = 7.7e-52
Identity = 116/151 (76.82%), Postives = 123/151 (81.46%), Query Frame = 0


Query: 14  STGIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNAGSSSQPPATPTPRRRAQSRL 73
           S GIMSY RNNFL+TD MFLEF+DDLDN+AGGSSSVGDNA SSSQPPAT TP+RRAQS+L
Sbjct: 42  SYGIMSYRRNNFLETDDMFLEFEDDLDNIAGGSSSVGDNARSSSQPPATLTPKRRAQSQL 101

Query: 74  LVLERHVVVNGRISMTIAPREEKSTFSHAVRFSQ-----WFFVLDFNDQAMNRFVKHQML 133
           L LE HV VNGRISMTIAP   K  F H VRF Q      FFVLDFNDQAMN FV+HQML
Sbjct: 102 LKLECHVTVNGRISMTIAPEAIKPIFPHVVRFRQAIGVCRFFVLDFNDQAMNTFVEHQML 161

Query: 134 TTFKEFRGDC-QSFKKYSDLEEARANPPNVL 159
           T FKEFRGDC + FKKYSD EEARANP NVL
Sbjct: 162 TIFKEFRGDCHRHFKKYSDPEEARANPQNVL 192

[Close]

BLAST of MELO3C033302 vs. NCBI nr
Match: KAA0050386.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK03398.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 214.2 bits (544), Expect = 1.0e-51
Identity = 125/204 (61.27%), Postives = 140/204 (68.63%), Query Frame = 0


Query: 2   CSYLLIECLFFMSTGIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDN-AGSSSQPP 61
           C+Y+++    + +    SY RNNF++ D MFLEF+DDLDN+ GGSSSVGDN   SSSQ  
Sbjct: 92  CNYVMVTSRVWRAIMSWSYPRNNFMEKDAMFLEFEDDLDNIGGGSSSVGDNTVRSSSQQL 151

Query: 62  ATPTPRRRAQSRLLVLERHVVVNGRISMTIAPREEKSTFSHAVRFSQ------------- 121
           ATPTPR RAQSRLL LERHVV+NGRI MTIAPR EK    H VRFSQ             
Sbjct: 152 ATPTPRGRAQSRLLELERHVVINGRIPMTIAPRAEKPISPHVVRFSQAIGVCVQKIFFVH 211

Query: 122 ---W----------FFVLDFNDQAMNRFVKHQMLTTFKEFRGDC-QSFKKYSDLEEARAN 178
              W           FVLDFNDQAMN+FV+HQMLTTFKEFR D  + FKKY+D EEAR N
Sbjct: 212 YLKWANVGREYIERLFVLDFNDQAMNKFVEHQMLTTFKEFRVDYHRHFKKYNDPEEARTN 271

[Close]

BLAST of MELO3C033302 vs. NCBI nr
Match: KAA0052779.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK04177.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 202.6 bits (514), Expect = 3.0e-48
Identity = 109/142 (76.76%), Postives = 116/142 (81.69%), Query Frame = 0


Query: 17  IMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNA-GSSSQPPATPTPRRRAQSRLLV 76
           IMSYTRNNFL+TD MFLEF+D+LDNLAGGSSSV DNA  SSSQPP T T RR  QSRLL 
Sbjct: 114 IMSYTRNNFLETDAMFLEFEDNLDNLAGGSSSVDDNATWSSSQPPTTTTLRRHTQSRLLE 173

Query: 77  LERHVVVNGRISMTIAPREEKSTFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEFR 136
           LE HV VNGRI MTI P  EK    H VRFSQ FFVLDFND AMNRFV+HQMLTTFKEF+
Sbjct: 174 LECHVAVNGRIPMTIVPGAEKPISPHVVRFSQRFFVLDFNDHAMNRFVEHQMLTTFKEFQ 233

Query: 137 GDC-QSFKKYSDLEEARANPPN 157
           GDC + FKKYS+ EEARANPPN
Sbjct: 234 GDCHRHFKKYSNPEEARANPPN 255

[Close]

BLAST of MELO3C033302 vs. ExPASy TrEMBL
Match: A0A5A7VQ82 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00680 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.6e-74
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 16  GIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNAGSSSQPPATPTPRRRAQSRLLV 75
           GIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNAGSSSQPPATPTPRRRAQSRLLV
Sbjct: 44  GIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNAGSSSQPPATPTPRRRAQSRLLV 103

Query: 76  LERHVVVNGRISMTIAPREEKSTFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEFR 135
           LERHVVVNGRISMTIAPREEKSTFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEFR
Sbjct: 104 LERHVVVNGRISMTIAPREEKSTFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEFR 163

Query: 136 GDCQSFKKYSDLEEARANPPNVL 159
           GDCQSFKKYSDLEEARANPPNVL
Sbjct: 164 GDCQSFKKYSDLEEARANPPNVL 186

[Close]

BLAST of MELO3C033302 vs. ExPASy TrEMBL
Match: A0A5D3CLG1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00440 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 4.6e-58
Identity = 122/146 (83.56%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 16  GIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNAGSSSQPPATPTPRRRAQSRLLV 75
           GIMSY RNNFLKTD MFLEFKDDLDNLAGGSSSVGDNA SSSQPPATPTP RRAQSRLLV
Sbjct: 44  GIMSYARNNFLKTDAMFLEFKDDLDNLAGGSSSVGDNAESSSQPPATPTPIRRAQSRLLV 103

Query: 76  LERHVVVNGRISMTIAPREEKSTFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEFR 135
           LERHVVVNGRISMTIAPREEKS FSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKE R
Sbjct: 104 LERHVVVNGRISMTIAPREEKSIFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEVR 163

Query: 136 GDCQSFKKYSDLEEARANPPNVLSNH 162
           GDC S  K      + A P  ++  H
Sbjct: 164 GDCHSPLK------STATPRRLMPTH 183

[Close]

BLAST of MELO3C033302 vs. ExPASy TrEMBL
Match: A0A5D3BCC5 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold598G00540 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 3.8e-52
Identity = 116/151 (76.82%), Postives = 123/151 (81.46%), Query Frame = 0


Query: 14  STGIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNAGSSSQPPATPTPRRRAQSRL 73
           S GIMSY RNNFL+TD MFLEF+DDLDN+AGGSSSVGDNA SSSQPPAT TP+RRAQS+L
Sbjct: 42  SYGIMSYRRNNFLETDDMFLEFEDDLDNIAGGSSSVGDNARSSSQPPATLTPKRRAQSQL 101

Query: 74  LVLERHVVVNGRISMTIAPREEKSTFSHAVRFSQ-----WFFVLDFNDQAMNRFVKHQML 133
           L LE HV VNGRISMTIAP   K  F H VRF Q      FFVLDFNDQAMN FV+HQML
Sbjct: 102 LKLECHVTVNGRISMTIAPEAIKPIFPHVVRFRQAIGVCRFFVLDFNDQAMNTFVEHQML 161

Query: 134 TTFKEFRGDC-QSFKKYSDLEEARANPPNVL 159
           T FKEFRGDC + FKKYSD EEARANP NVL
Sbjct: 162 TIFKEFRGDCHRHFKKYSDPEEARANPQNVL 192

[Close]

BLAST of MELO3C033302 vs. ExPASy TrEMBL
Match: A0A5A7U876 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2679G00080 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.9e-52
Identity = 125/204 (61.27%), Postives = 140/204 (68.63%), Query Frame = 0


Query: 2   CSYLLIECLFFMSTGIMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDN-AGSSSQPP 61
           C+Y+++    + +    SY RNNF++ D MFLEF+DDLDN+ GGSSSVGDN   SSSQ  
Sbjct: 92  CNYVMVTSRVWRAIMSWSYPRNNFMEKDAMFLEFEDDLDNIGGGSSSVGDNTVRSSSQQL 151

Query: 62  ATPTPRRRAQSRLLVLERHVVVNGRISMTIAPREEKSTFSHAVRFSQ------------- 121
           ATPTPR RAQSRLL LERHVV+NGRI MTIAPR EK    H VRFSQ             
Sbjct: 152 ATPTPRGRAQSRLLELERHVVINGRIPMTIAPRAEKPISPHVVRFSQAIGVCVQKIFFVH 211

Query: 122 ---W----------FFVLDFNDQAMNRFVKHQMLTTFKEFRGDC-QSFKKYSDLEEARAN 178
              W           FVLDFNDQAMN+FV+HQMLTTFKEFR D  + FKKY+D EEAR N
Sbjct: 212 YLKWANVGREYIERLFVLDFNDQAMNKFVEHQMLTTFKEFRVDYHRHFKKYNDPEEARTN 271

[Close]

BLAST of MELO3C033302 vs. ExPASy TrEMBL
Match: A0A5D3BXD7 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1856G00020 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.5e-48
Identity = 109/142 (76.76%), Postives = 116/142 (81.69%), Query Frame = 0


Query: 17  IMSYTRNNFLKTDTMFLEFKDDLDNLAGGSSSVGDNA-GSSSQPPATPTPRRRAQSRLLV 76
           IMSYTRNNFL+TD MFLEF+D+LDNLAGGSSSV DNA  SSSQPP T T RR  QSRLL 
Sbjct: 114 IMSYTRNNFLETDAMFLEFEDNLDNLAGGSSSVDDNATWSSSQPPTTTTLRRHTQSRLLE 173

Query: 77  LERHVVVNGRISMTIAPREEKSTFSHAVRFSQWFFVLDFNDQAMNRFVKHQMLTTFKEFR 136
           LE HV VNGRI MTI P  EK    H VRFSQ FFVLDFND AMNRFV+HQMLTTFKEF+
Sbjct: 174 LECHVAVNGRIPMTIVPGAEKPISPHVVRFSQRFFVLDFNDHAMNRFVEHQMLTTFKEFQ 233

Query: 137 GDC-QSFKKYSDLEEARANPPN 157
           GDC + FKKYS+ EEARANPPN
Sbjct: 234 GDCHRHFKKYSNPEEARANPPN 255

The following BLAST results are available for this feature:

BLAST of MELO3C033302 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067855.1	9.4e-74	100.00	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYK11059.1	9.4e-58	83.56	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0067107.1	7.7e-52	76.82	CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYJ97490.1 CACTA en-...	[more]
KAA0050386.1	1.0e-51	61.27	CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK03398.1 CACTA en-...	[more]
KAA0052779.1	3.0e-48	76.76	CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK04177.1 CACTA en-...	[more]

BLAST of MELO3C033302 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C033302 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VQ82	4.6e-74	100.00	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3CLG1	4.6e-58	83.56	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3BCC5	3.8e-52	76.82	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7U876	4.9e-52	61.27	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3BXD7	1.5e-48	76.76	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of MELO3C033302 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C033302.1	MELO3C033302.1	mRNA