MELO3C033299.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C033299.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionMetal transporter Nramp1-like
Locationchr08: 16777908 .. 16784768 (+)
RNA-Seq ExpressionMELO3C033299.jh1
SyntenyMELO3C033299.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCCAAATCCCATTATCGCTACTTGGTCAGAGCTCTAAAGAAAAATCAGAAAAAAGATTTAGAGTGGGGGAAAGGTTTGGGTTGTATCACATCAGATGCAATGGCAAAGCTCTAGATTTAAGAAGGAATGGTAATGGAAAATGGAATCATGATCTCAGAAATGAAGGCTATCCAATTGCATTGTTTCATCATTCTGTTGTTACTTAATGAATAACCATAATGTTTCCAATACGAACACTAAGGAAGGTTGGTCTAATAGTTGAAGAAATGCATACACCCAAAACTAGCTGCTATTCCAGAATGTGTGAATAGACTATTTGATTTAGGTAAAAGCTATTTTGTAGTGTTTACATCATAATCTCTATTAGCATGTTAATCGAGAAACTTTATAATGGTTAACTCATTACCTCTCTTGTCTTCAGTTTGATATTGTTGTTTTTTTTTATATTGGTGGAATTCCACCTTTCACCAACTCTCAACTTAAAAGGTATCGTGTGAATCTATGGGAATAATCTAGTGCGAATAGTGGAGTTTGGTATTTTCCTTTTGTGGAGTTAAATCTATCAGATGCAAGACATGTGCTTAACTACTAAGGATATGAAAAACCCTTTGCTCTGCCTACATGGTTTATAGAAAGTATCTGAAAACGTTCACCACTTTTGCAATTTCAACAATAACTGTCAATTCTTTTGCTACTGTTGTTATTTAGTCGATTTGATAGTTGTACAATTTTTGCTGTATCATGTTTGATTTATAGCCTCTTTAAAGAATTTACGAGAATATTGTTTAAGTATTTATTTGTTATAAGAGTCTACCCACTCCTTTTCAATTGTTATTCAATATATTTAATTTCTTACTCCGTTGACAGCAGGTCTATTTGGAGGAACAAGTTCTAAGGTTCAAACTCGACGTTGATATTCTTCAGGTACTACTTTTTTGTTTTCACAAATTTCATAGATATTCTTCAGACACTCATCCCTTTATCTCCTTAATCCAATTCATTATTGGTGACTTTTGATCAGTTTGAAGAAAAAATTTATAGCTATTTAGATAACAACTTCTCATCAGGTCCCTTTGGATTTTCAGTTTTTTAAATTGCATCTATATGTATACTTTTGTTATCAATTTCAATATATTTCATAATGAAGCAGTTTGATCTATGTTGTTTTTATTTGAATCTAAATATATATGTGTAAGATTTATGATTGTAAACAAGCTTAACTCTAATCATTGAAATATTTAATGTATTGAAGTTACTAGGATGCCACTTTTTTTTCTTCAAAGCTGCCTTGTTAGAATTCCAAAGGTTAAATGGTTGATATAGATATTGTTTGTAGAATGATTGAAGTCATATCTATATATGATCATCGATTCCTATGCATGAAACAACAAATACAAAAGGATTATTTTTTATTATACTTTCGATTTCACAGGCTGCACTTGACACAAAAATAGTGAGGAGCGCAAATGTTTCTGCAAAAATAAAACAATCAAGATTCAGTCCGTAATGAAAGCTATTTGAGGTAATTCGTGAGCCCTAACATATTTGGTTATTTAATTTAGAGGTAGTTAAAGAGTTTTGTATAAGAAATTCGTGTGGTTTTGAGGCTGGATTAGATGAAATGGTTGTTTAAAATTTTGAATGCGACTGCCAAAAAACAGAGTATAACAAAAAGCACAGATAAATGAGGAAGAAGATGAAGTCTGACATAGTTTTCCATCATTGAATGCTTATTTTTGGGATTTAAGGTTGTTTAAGCAATTTGAAGCTATTCTTTAACAATATGGGAAGTATTAGATACTTTAACTTGAAAAATGGACACTAAAATGAGTTTGAAGGACTTAAGGTTTGCTATTGACTTTATTAGAATCTCGTTTTTTACACTTGCAAGTCTTTGTGTTTTAGGAATAGTTGTTGAAGTGCAGCACATTTGCAACACCATCAAAATAAATTTCTGGTTACCTCCGTGAAGTTGTCTTCCACTGTTTATTGCTTCTCCTCGCTCCCTCCTCCATTCGCTTCGTTCTCCATTCATTTCGATTCGTTCTTTCTCCAGTTCGCTCCCTTCACTCTCTTTTCTTCCATTCACATTTTTTGGCTGAAATTTGAGTTCTTTGATTGCTATTTTGGATAATGCTCAAATTATAAATTAATATATTTGAAGAAATTGATTTTGACTGTAACAGAGAACTTGTGGGATTAACCCAGCATTGCCTGCTTGGAATGTTGCAAAATTGACTTGAAATATTTGGCAACTAGAGGATTTTGAGTACAAAGGTGACATAGTTTATGTGAGGATTAAAGCATGCACGAATACCTTTTCTTTTAAAGTAAAATTTTGAATTGCAATGAAATATAATTTTCAAAAGCAGTTACTGGATATAAACTTCAAGACAAGACAAGGCTCCTAGCTCCTGTACAATACTGACCTGGTTCTTTGAAGCTTATTTTAGTGTTCCATCATCACTAGCAACAGTTTTGATGTGACCACATTAGAAACTTAAGTGCAAAATAGCTTAGCAGACCTGTTCAGCAAATATTTCTCTGCTTTTCATCATTGATAGCTTTCTCATAAATGCATAAATATTTAAGATAAGACTCAGAAGAGGCACCCCTATATTGTTCGTTTTTGCTTAGTCATACATTGAAGTAGAACAAAATCAATAGCTTTGAGTTTGATTGAGTTAACAAAAACTTGGAACAACACCTGAGAACTTCTACCACATCTTTTTTGACAAGATTTATTGATTATTCATATCATTTTGAATGATTCATGCACTTCATTTGTGTTTTCTGTGGACCAAAGTTATAAATTGAATAGAATAACCTTTTAGACTTGTATCCTAACTTTTACTAGTCAACGTTGAATTTCACTATCAACTATCATCTTTTTAGGGAGCTTTGTCTTGCTCCTATTTACATAAAAACACAATAAACTAATCATCATTAGATACAAAAAATCATTCAAACATGTTTCCTATCAGAATACCAAGCTATGTCTAATCGCTTGGATTACTAACTAATACCAAGTTTGCTTGACTAGTTCATGGTCTGCTTCGTAGGCTGCTTGCATTGTGGTTCTAATTTCGTGAACTATTTGTTTTGTTACTGTTAGATTGAGAGAGATACTTTATGGTCGTAGGGCCTGGTTGGGGTTTCTTATCTTTCAGTTTTATGGTTGTAAGACATGAGTATTCTTTAAGGAAGGTTTAAAATATCAAGTTTTATGGTAGCCATTAGGTTAGCTCCATTTTGAAACTTGTTTTTGACACTTGCAAGTCTTTATGTTTTAAGAATAGTTGTTGAAGCGCATCACATTTGCAACACCGTCAAAATCAATTTCTGGTTACCTCCATGAAGTTGTCTTCCGCTGTTGATTGCTTCTCCTTGCTCCCTCCTTCGTCCGCTTCGTTCTCCGTTCATTCTGGTTCGCTCCCTTCACTCTATTTTCTTCCATTCACATTTTTTGGCTGAAATTTGAGTTCTTTGATTTCTATTTTGAATCCTATGTTATTTTTTACTGTCCACTGCTACCATTCCTTGCAAATTTATCATCCAGTTTAGTTTATCAATGCACACTAACGACAAGCATGATTTAGCAAGTAACAAAGCACAAAATGAGAATAGTGTTAAAACTAAGAACTTTAACTTCTAAGTCTATGAACATTGATAATAGAATTATGTCCTTGAAATAGAAAGACTTGGAACTTCTAGTGCTTGAGAATTGCAATACAGATATATAAAGGCAATACACTAACCATTTCTAATGATCCAATCTGAAGCTTGTTGAAGATTAGGTACTTTTTTCAAACACTTCAGCTACCTAACTCATACACCATACCAATGACACAACGGCTAAAGAAAACATCACATTCATCACATTTTCCCATAACTACTTGGACCCTTCAACCTTCCATGAAAAAGTATATGATGAAATAGTTACTACTAAGAGAACAACCTAAGAAAAATCATCCTAGGCATGTTACATGGATAATGCTCAAATTATAAACTTAAACTAGGTTAGTTGACATGTAAGAGAACCAAGCCATAATTTCAACATATAAAACAAGTCTTGGTTTCCAGCAGATGTTTTTTTCTTGATCTCTCATCTCCAGCAAGATAGTTATTAACAACAAACATAGAAATAAGGCCTCACCAAACCTTAGAACTCAAAAAAAAATTTTTTGTTCAAGTATCAAATCAACCAATCAAATTCTCAGTATTACACTTTATGTATCCAAAATACAGTAGACGAGACAAATGCTTCATTTAAAAGATATTGGTCTAAGAAGTAATTGCAAAACACACTTTTAATGGAAAAAGGGGACTGCTTTTAGCTCTTGTAGGTGGCCAAGATGACTACTTTTAGCACTTTTAATTGTTTCTTGTCACTCCTCTCGTTTGTATTCTTCAATTTTTGTTGTGTGTTTTTTTTATTTTTACTGCTAGAAATGATCTTCTTACCTTAAATACCTGAGAAGTGATGTTCGATCATTGTTTTTTCTTTTCTCTTCGTGGCCAAGAAGAGCGTTGTTTGTCTGTTTCCTTTAAAGAAATGAAGAATGATTGTTGAATTTCCATTTTGCTGTTGTTTTACACTGTTTCTTGTTATTCTGGTGGCTAATTAGCCAGTCACGCATCGACTTAGTAGCTGTTTGTTCTATGTGAATGGTCAGTAAGCTCACCTAAAGCAATGTTGTTTGACAACCGTTAGAGTGAAGGTAGATCGTGTAGTTTCTCTTCAAGGCTGTGAAAGTACATGTCTTAAATCATGTTTAATTGTATGGCTGAATGGAGAAACTGAAGGAGCAAAATCTCAAAGAAACCATTAAAATAATAAATCTATGGTGTTGCCAATGAAGAGATATATATATATACAAATAATAATTGTGCTAAAGGCAGAGTTTCAGCAGAATATTTAATGTGTAAAACACTAATTATAGCAAGAATAATGGGGTATATAATGAACAGTTACAACTCTTAGGTCTGTTTCACTGACAATCTGAAATTTCTGCTGCCTTATAGGAATTTCTGCTGCATTTCGAGTTCATCAAAGAGAGCTCTCTGAATTACTGAGATCTGCTTTTCGTTCATTACGGTACGTTTTTGTTTTCTTCTAATTTTCTCTTCACTGTGAACATTTTCAACCTTCTCTTCCTCTAGACTTCTAGCTTATTTAGTTTCTTTGGCATTCTCATTGGACTTGGAAGAATCAACAATGTCTGTTTGCTTAATGCCATTTCTTCCCCTAGAAGAGTTTGTATGCTGCTATGAAGAGCTGAGATGACCCATATTCACCATAGGCCTTTTTGTTTGTAAACATATGTATGGTGCTGCCTCCAGCCTAATCATAAATCTAATCAAGACAAGTTTCAGAACTAGGAATTTCCTAAAGTTTTCAATTACGTAATGTTTTTGAATAGGCTCCAATTTTATTTATATTTATCTTTTCTTGTTGAAGCTAGTAAGTCCTGTCATGTCACTAGAATTCACTTGCTTGTTATATTCCTAGTGGAAATGACAACTAATGTTGCTTCTCTTCGTACAGTTGCTTTGGATCATATTAGTGGCTTTCTTTGCTGCTATCATCATTCAGTCTTTAGCAGCCAATCTAGGGGTTGTCACAATTAAATGACTGTTGCATAACGTTCTTCCTTTCTTTCTTTTTTTTGGCTTATCAAAGTTGTGATATTTTCATAGTTTCAACAGTTGTTTGACATTTAGCAGAGAACTATAAAGCCGAGTACCCCAAAGTTCAAGTGATAGTTAGACACCTTTTGATCACTTTTTAGGTTCGTTTGAAACTAAGTTTGTTCAACTTACACGCCGGGTTGCCATTTTGGGTCTTTAAGTGCTTTTTCCACACTTTTTGAACTTTTGGGTACGTTATGAGTTACGAACTTGCATTTCAGCATTGTTAGGTCATTTTGAAAAGTAATGTGATACTTATGAATGTTTTGATCGCTTTTTTGGTTGGGTAGGTTATGAGTTACGAACTTCATGTGTTTTTTTAGATGTTTTTAACTTTTTGGTAGGTGATGACTTACAAACTTACACTTATTTTTTGTTAGGTGAAGTTGAAAGTTATGCTTATGCACGTTGTGAATACTTTGTAGGTTGGTTTAAGTTTGTTGAACTTACACACTTGGTTGCCAATTAGGCCAGGAAGTGCTTTTTTTCGACTTCTTTTAACTTTTTGGGAGGTTATGAGTTACGAACTAACACTTGAGCATTGTTAGGTCATTTGAAAGTTCAAGTGATACTTACACACATTTACAAGACTTGCTTAGTTCGTTTCAAACTCAGTTTGTTGCACTTACATACTCGATTGCCATTTTGAGTGTTCAAGTGCTTTTTTCACACTTTTAAAACATTGTTAAGTCGTTTTGAAAGTTCAAGTGACACTTAGACACGTTTTTAGAACTTTTTAGGTTCGTTTGAACTTATAATGAAGGTGAGAGGAACAATCCATGGAGAAAAAGTTGTTGTGCTCATTGATTGTGGAGCAACACACAATTATGGAGTGATCTTAGGCTACGGTGCTGCTGTCAAGGGAAACGGTGTGGGAAGAAGTTAAAATCATGCTTAATGACTAGTTAGTTGTGGAAATTTCTCTACAAAGGCTTCAGGTTGGTGAGGGAAAGATATCGAATCTTATTTACGAGAATGAGCAGTACAAACTCACTCCTTTGATACAATATCTATATCAACTAAGAGCACCATCACAGGAGATCATGTCCTCCTCAACCTCTCTCTTAGATGGTCTCCCTACTACTCCCCCTCCTCGTCACCTCTCTTCTCTTAACGAACTATTTAAACTCTCTGTCACTCCCCACTTACTAGGTGCATGGTTTCTCTAA

mRNA sequence

ATCCAAATCCCATTATCGCTACTTGGTCAGAGCTCTAAAGAAAAATCAGAAAAAAGATTTAGAGTGGGGGAAAGGTTTGGGTTGTATCACATCAGATGCAATGGCAAAGCTCTAGATTTAAGAAGGAATGGTAATGGAAAATGGAATCATGATCTCAGAAATGAAGGCTATCCAATTGCATTGTTTCATCATTCTGTTGTCTATTTGGAGGAACAAGTTCTAAGGTTCAAACTCGACGTTGATATTCTTCAGGCTGCACTTGACACAAAAATAGTGAGGAGCGCAAATGTTTCTGCAAAAATAAAACAATCAAGATTCAGTCCCGCATCACATTTGCAACACCGTCAAAATCAATTTCTGGTTACCTCCATGAAGTTGTCTTCCGCTGTTGATTGCTTCTCCTTGCTCCCTCCTTCGTCCGCTTCGTTCTCCGTTCATTCTGGTGATGACTTACAAACTTACACTTATTTTTTGTTAGGTGAAGTTGAAAGTTATGCTTATGCACGTTGTGAATACTTTGTAGGTGAGAGGAACAATCCATGGAGAAAAAGTTGTTGTGCTCATTGATTGTGGAGCAACACACAATTATGGAGTGATCTTAGGCTACGGTGCTGCTGTCAAGGGAAACGTTGTGGAAATTTCTCTACAAAGGCTTCAGGTTGGTGAGGGAAAGATATCGAATCTTATTTACGAGAATGAGCAGTACAAACTCACTCCTTTGATACAATATCTATATCAACTAAGAGCACCATCACAGGAGATCATGTCCTCCTCAACCTCTCTCTTAGATGGTCTCCCTACTACTCCCCCTCCTCGTCACCTCTCTTCTCTTAACGAACTATTTAAACTCTCTGTCACTCCCCACTTACTAGGTGCATGGTTTCTCTAA

Coding sequence (CDS)

ATGAAGTTGTCTTCCGCTGTTGATTGCTTCTCCTTGCTCCCTCCTTCGTCCGCTTCGTTCTCCGTTCATTCTGGTGATGACTTACAAACTTACACTTATTTTTTGTTAGGTGAAGTTGAAAGTTATGCTTATGCACGTTGTGAATACTTTGTAGGTGAGAGGAACAATCCATGGAGAAAAAGTTGTTGTGCTCATTGA

Protein sequence

MKLSSAVDCFSLLPPSSASFSVHSGDDLQTYTYFLLGEVESYAYARCEYFVGERNNPWRKSCCAH
Homology
BLAST of MELO3C033299.jh1 vs. NCBI nr
Match: KAA0041520.1 (metal transporter Nramp1-like [Cucumis melo var. makuwa] >TYK24393.1 metal transporter Nramp1-like [Cucumis melo var. makuwa])

HSP 1 Score: 56.6 bits (135), Expect = 7.24e-08
Identity = 26/36 (72.22%), Postives = 30/36 (83.33%), Query Frame = 0

Query: 17  SASFSVHSGDDLQTYTYFLLGEVESYAYARCEYFVG 52
           +A+  V +GD+LQTYTY LLG  ESYAYARCEYFVG
Sbjct: 78  AANLGVVTGDELQTYTYVLLGPFESYAYARCEYFVG 113

BLAST of MELO3C033299.jh1 vs. NCBI nr
Match: KAA0063972.1 (metal transporter Nramp1-like [Cucumis melo var. makuwa])

HSP 1 Score: 55.5 bits (132), Expect = 1.48e-07
Identity = 26/33 (78.79%), Postives = 27/33 (81.82%), Query Frame = 0

Query: 20 FSVHSGDDLQTYTYFLLGEVESYAYARCEYFVG 52
          F+   GDDLQTYTY LLG  ESYAYARCEYFVG
Sbjct: 63 FNFLVGDDLQTYTYVLLGPFESYAYARCEYFVG 95

BLAST of MELO3C033299.jh1 vs. NCBI nr
Match: KAA0058343.1 (ty3-gypsy retroelement transposase [Cucumis melo var. makuwa] >TYK22490.1 ty3-gypsy retroelement transposase [Cucumis melo var. makuwa])

HSP 1 Score: 54.7 bits (130), Expect = 1.49e-07
Identity = 25/36 (69.44%), Postives = 28/36 (77.78%), Query Frame = 0

Query: 17 SASFSVHSGDDLQTYTYFLLGEVESYAYARCEYFVG 52
          + +  V +GDDLQTY Y LLG  ESYAYARCEYFVG
Sbjct: 26 AGNLGVVTGDDLQTYAYVLLGPFESYAYARCEYFVG 61

BLAST of MELO3C033299.jh1 vs. NCBI nr
Match: KAA0057657.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 51.6 bits (122), Expect = 1.70e-05
Identity = 21/26 (80.77%), Postives = 22/26 (84.62%), Query Frame = 0

Query: 35 LLGEVESYAYARCEYFVGERNNPWRK 60
          + G  ESYAYARCEYFVGERNNPW K
Sbjct: 32 ITGPFESYAYARCEYFVGERNNPWEK 57

BLAST of MELO3C033299.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DL85 (Metal transporter Nramp1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001790 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.50e-08
Identity = 26/36 (72.22%), Postives = 30/36 (83.33%), Query Frame = 0

Query: 17  SASFSVHSGDDLQTYTYFLLGEVESYAYARCEYFVG 52
           +A+  V +GD+LQTYTY LLG  ESYAYARCEYFVG
Sbjct: 78  AANLGVVTGDELQTYTYVLLGPFESYAYARCEYFVG 113

BLAST of MELO3C033299.jh1 vs. ExPASy TrEMBL
Match: A0A5A7V6M6 (Metal transporter Nramp1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold616G001290 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 7.15e-08
Identity = 26/33 (78.79%), Postives = 27/33 (81.82%), Query Frame = 0

Query: 20 FSVHSGDDLQTYTYFLLGEVESYAYARCEYFVG 52
          F+   GDDLQTYTY LLG  ESYAYARCEYFVG
Sbjct: 63 FNFLVGDDLQTYTYVLLGPFESYAYARCEYFVG 95

BLAST of MELO3C033299.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UR44 (Ty3-gypsy retroelement transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold19523G00270 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 7.22e-08
Identity = 25/36 (69.44%), Postives = 28/36 (77.78%), Query Frame = 0

Query: 17 SASFSVHSGDDLQTYTYFLLGEVESYAYARCEYFVG 52
          + +  V +GDDLQTY Y LLG  ESYAYARCEYFVG
Sbjct: 26 AGNLGVVTGDDLQTYAYVLLGPFESYAYARCEYFVG 61

BLAST of MELO3C033299.jh1 vs. ExPASy TrEMBL
Match: A0A5A7USJ8 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43054G00320 PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 8.23e-06
Identity = 21/26 (80.77%), Postives = 22/26 (84.62%), Query Frame = 0

Query: 35 LLGEVESYAYARCEYFVGERNNPWRK 60
          + G  ESYAYARCEYFVGERNNPW K
Sbjct: 32 ITGPFESYAYARCEYFVGERNNPWEK 57

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0041520.17.24e-0872.22metal transporter Nramp1-like [Cucumis melo var. makuwa] >TYK24393.1 metal trans... [more]
KAA0063972.11.48e-0778.79metal transporter Nramp1-like [Cucumis melo var. makuwa][more]
KAA0058343.11.49e-0769.44ty3-gypsy retroelement transposase [Cucumis melo var. makuwa] >TYK22490.1 ty3-gy... [more]
KAA0057657.11.70e-0580.77transposase [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DL853.50e-0872.22Metal transporter Nramp1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A5A7V6M67.15e-0878.79Metal transporter Nramp1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A5A7UR447.22e-0869.44Ty3-gypsy retroelement transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A5A7USJ88.23e-0680.77Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43054G00320 ... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033299.jh1.t1MELO3C033299.jh1.t1mRNA