MELO3C033224 (gene) Melon (DHL92) v4

Overview
NameMELO3C033224
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr08: 11283344 .. 11285113 (-)
RNA-Seq ExpressionMELO3C033224
SyntenyMELO3C033224
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCTGCTACTACAACATGTTTTTGTTGTTTCTTTGGACACTATTCGTTTTGGTGCTGCCTATATTTCTTCCACCGCTCCCGGCACCGCCCATGGTTCTTCTCTTTGTGCCTCTTGTTATCATGATGCTTCTTATCTTCTTCGCCTTGTCGACTTCTCAACTTCCAACCACTACAGTCGCGTCTGAAAGTTGTTGACCACATTTTTGTATAGTACAACACAGGTCCTCCAACTCCTATACTTTTTACGATGATATGGTATAGTTTACTTTAGATCTGGTCTCTCATGATTTTGCGTTGTACAATGAAAATGTATCTAAATGGACCTCTTTTCATTTATTCTTGCCATCTTATAGACTATGTTCATATCTCGATCAAATTCGATAATTTTGATTTAATTTTTGTGATCTTGGTTGAATAGTTGTCCTTTTTTTGGGATCGCGACGACTTGAAGAAGAAGAAAAGGAAATAATGAAGAAAAGAATGGGTGAGTTGGAAGGGAAAGAGAATAGGGTTTTGTATTTTGTTTTACAAAATTAGAGGATATATATTTGTGAGTTGGAAGTTTGTACATAAAGCTTTAGAGTTGTAATAATATATATTATTGTTTCAACGCACTGTGTTTTAATTAGAGCCAACCAACTACCTTTTTGGTTTGTCTTCCAAATCTAATAATTTTGCTTTCCGACAAAATTGAATGTTTGGTGGTCATCACAAACATGTTTAAGACAAAACTACCTAAATATTAGACTCTTGTTTGGAAATTGGGTTGAGGGACATTCCTCCAAAATTATTTTGTGAGTTTACTGGACCATGGAGGGATTCTGTAATGCTTTAAATGGTTTACATTGTTACTACTTGAAGAACACGTTTATAAATAAAAGAGGAAAGAACACCCACATTTAGTCCTCTTATCTTTAAGAGGTTTAAATAATTCGAACATATTACACATTTAGGTTTTAGCTTTTGAGTTTGATTTCAAGTATTGAATGAAAAAATTGGGATAGAAATATGTAGTATTATTTTAATTTCAATTACACTCCCACGTTGATTAATCTTGGAAGTCCCTTTTTATACTCATTGATTGATCAATGGATTTGGATCTTTAGGGCACCCAAGTTTTTGAAAGAGGGAGGAGATAAGCTGGGTTTGGACCCTTAGGGCATGCTGTAAGTTGGGTGTGGTGAGGAGAGGTAATCTATATATTCCTTTTACTAAAAGTTTCTTCTAACTTTCAAAACGTTGAAACCTTTTTTCATGGCAAACTTGTGATTGTTGGCCACTCCTTACCTATCACTATATATACATCTCAGTTTTCTCTCATTCCAAACACACGAAAATCGTTCTTCTCATTTTGTGATATAAACAAAAGTTCCCGTCCTATAGTTGAGTGTTCTTTAATACCAGTTGAATTCGTGCAAAATTAATTGAAGAAGAGAGGTTGTTTTATCTTGGAGACGACGGGACAATTATCTGTTTGCACAATCCATGGTGACTATTGGCCACTTCTTACCTATCACTATATATACATCTCAGTTTTATCTCATTCCAAACACACAAAAACCATTCTTCTCATTTTTTGATATAAACAAATGTTCCCGACCTATAGTTAAATGTTTTTAAATACCAGTTGATTTCGCGCAAAATCAATTGAAGAAGAGAGGTTGTTTTATCTTGGAGACAACGAGGCAATTATCTGTTTGCACAATCCAGAGCAGAGTCGCAAAATGTCTTAAAGAGACCGTGTTCTGTGACTCAGTTATTTATTAA

mRNA sequence

ATGGTCTGCTACTACAACATGTTTTTGTTGTTTCTTTGGACACTATTCGTTTTGGTGCTGCCTATATTTCTTCCACCGCTCCCGGCACCGCCCATGGTTCTTCTCTTTGTGCCTCTTGTTATCATGATGCTTCTTATCTTCTTCGCCTTGTCGACTTCTCAACTTCCAACCACTACAGTCGCGTCTGAAATTGTCCTTTTTTTGGGATCGCGACGACTTGAAGAAGAAGAAAAGGAAATAATGAAGAAAAGAATGGTTGATTTCGCGCAAAATCAATTGAAGAAGAGAGGTTGTTTTATCTTGGAGACAACGAGGCAATTATCTGTTTGCACAATCCAGAGCAGAGTCGCAAAATGTCTTAAAGAGACCGTGTTCTGTGACTCAGTTATTTATTAA

Coding sequence (CDS)

ATGGTCTGCTACTACAACATGTTTTTGTTGTTTCTTTGGACACTATTCGTTTTGGTGCTGCCTATATTTCTTCCACCGCTCCCGGCACCGCCCATGGTTCTTCTCTTTGTGCCTCTTGTTATCATGATGCTTCTTATCTTCTTCGCCTTGTCGACTTCTCAACTTCCAACCACTACAGTCGCGTCTGAAATTGTCCTTTTTTTGGGATCGCGACGACTTGAAGAAGAAGAAAAGGAAATAATGAAGAAAAGAATGGTTGATTTCGCGCAAAATCAATTGAAGAAGAGAGGTTGTTTTATCTTGGAGACAACGAGGCAATTATCTGTTTGCACAATCCAGAGCAGAGTCGCAAAATGTCTTAAAGAGACCGTGTTCTGTGACTCAGTTATTTATTAA

Protein sequence

MVCYYNMFLLFLWTLFVLVLPIFLPPLPAPPMVLLFVPLVIMMLLIFFALSTSQLPTTTVASEIVLFLGSRRLEEEEKEIMKKRMVDFAQNQLKKRGCFILETTRQLSVCTIQSRVAKCLKETVFCDSVIY
Homology
[Close]
BLAST of MELO3C033224 vs. NCBI nr
Match: KGN54720.1 (hypothetical protein Csa_012521 [Cucumis sativus])

HSP 1 Score: 87.0 bits (214), Expect = 1.3e-13
Identity = 52/62 (83.87%), Postives = 55/62 (88.71%), Query Frame = 0 

Query: 1   MVCYYNMFLLFLWTLFVLVLPIFLPPLPAPPMVLLFVPLVIMMLLIFFALSTSQLPTTTV 60
           M  Y NMFLLFLWTL +LVLP+ LPPLP PPMV LFVPLVIMMLLIFFALSTSQ+PTTTV
Sbjct: 63  MARYSNMFLLFLWTLSLLVLPLLLPPLPPPPMVFLFVPLVIMMLLIFFALSTSQVPTTTV 122

Query: 61  AS 63
           AS
Sbjct: 123 AS 124

[Close]
BLAST of MELO3C033224 vs. ExPASy TrEMBL
Match: A0A0A0KYG7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G433470 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 6.2e-14
Identity = 52/62 (83.87%), Postives = 55/62 (88.71%), Query Frame = 0 

Query: 1   MVCYYNMFLLFLWTLFVLVLPIFLPPLPAPPMVLLFVPLVIMMLLIFFALSTSQLPTTTV 60
           M  Y NMFLLFLWTL +LVLP+ LPPLP PPMV LFVPLVIMMLLIFFALSTSQ+PTTTV
Sbjct: 63  MARYSNMFLLFLWTLSLLVLPLLLPPLPPPPMVFLFVPLVIMMLLIFFALSTSQVPTTTV 122

Query: 61  AS 63
           AS
Sbjct: 123 AS 124

[Close]
BLAST of MELO3C033224 vs. TAIR 10
Match: AT2G41230.1 (unknown protein; Has 75 Blast hits to 75 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 3.4e-04
Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 0 

Query: 9  LLFLWTLFVLVLPIFLPPLPAPPMVLLFVPLVIMMLLIFFALSTSQLPTTTV 61
          LL   +L +L+LP FLPPLP PP  LL +PL++M+LLIF A S S  P+  V
Sbjct: 32 LLLFLSLLLLILPPFLPPLPPPPATLLLLPLLLMILLIFLAFSPSNEPSLAV 83

The following BLAST results are available for this feature:
BLAST of MELO3C033224 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54720.11.3e-1383.87hypothetical protein Csa_012521 [Cucumis sativus][more]
BLAST of MELO3C033224 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033224 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYG76.2e-1483.87Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G433470 PE=4 SV=1[more]
BLAST of MELO3C033224 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G41230.13.4e-0453.85unknown protein; Has 75 Blast hits to 75 proteins in 8 species: Archae - 0; Bact... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR38928:SF7SUBFAMILY NOT NAMEDcoord: 4..63
NoneNo IPR availablePANTHERPTHR38928ARGOS7coord: 4..63

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033224.1MELO3C033224.1mRNA