MELO3C033188 (gene) Melon (DHL92) v4

Overview
NameMELO3C033188
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Locationchr08: 9729617 .. 9730732 (+)
RNA-Seq ExpressionMELO3C033188
SyntenyMELO3C033188
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACGCGTGCCATGAATTTGTATCATGCCTTTTCTTTTTAACTGTTAAATTGTGAAATTGCTAACGTCCATGTATTTTTTCTAATTTGTCATTCTCAGTATGTCAACCTCAAATTGTGCCCCGAGACATGTCTGAACGAAGGAGGAGGAGGGCACTCTTGTGGAATGTTTAATGGAGTTGGTGTCAATGGGGGATGGAAATCAGATAATGGTACGTTCCGCCCAGGTTACCTTGCGCAGTTAGTACGCATGACGGCGGAGAAACTACCTGGATGTCAGGTCCGAGCAACGACTGTAATTGATTGTAGAATTAAGACACTGAAGCGAACATTCCAGGCCATTGCCGAAATGCGGGGGCCAACGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATCATTGCGAAGAAGGAATTATTTGATAATTGGGTTAGGGTAAGGAAAATAATATAAACGTCACACAACGTTCACAATGTACATTTACTTAACAATTTTTCAATCAGTACTCATACGTGATATTTTTTTCCCCGCAGTCGCATCCTGCAGCGAAGGGACTCTTGAACGAACCATTCCCGTATTACGACGAACTTACATATGTCTTCGGTCGCGATAGGGCGATCGGTCGGTTCGCTGAGACATTCGCCGACGTCGGGTCTAACGAGCTTGGTGACGGATATGACAGATTTGATATGGGAGATGGAAACGAGGAGTTCCCGCCCGTGTACAACCAGGGGATTGACCTCTCGCTGGACGATGTACGTGCATCCCAACCTTCTTGCACTTCAAAGGGTAGGACCGGATCCAGTGGATCCAAGAGGAAGAAGGGAAGTCAGCGAGACTTCGATGTTAAAGCGATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAGGCAGATTGCAGAGTGGCCTGCACGTACCCTTGCAAATGACAACCATGTGCGCACGAAATTATTCCGCATATTGTGTGAGATGCCAGAACTTACGAGTTTGGATAGGACGTTATTGCAAAGGCATCTTTTGTCTCGTATGAACGACCTTCAGGGTTTCGTACTCATGCCTGAGGATGAGAGGGAGAGATTTTGTAGAGTCCTACGAGACATTACGAGATAG

mRNA sequence

ATGTACGCGTGCCATGAATTTTATGTCAACCTCAAATTGTGCCCCGAGACATGTCTGAACGAAGGAGGAGGAGGGCACTCTTGTGGAATGTTTAATGGAGTTGGTGTCAATGGGGGATGGAAATCAGATAATGGTACGTTCCGCCCAGGTTACCTTGCGCAGTTAGTACGCATGACGGCGGAGAAACTACCTGGATGTCAGGTCCGAGCAACGACTGTAATTGATTGTAGAATTAAGACACTGAAGCGAACATTCCAGGCCATTGCCGAAATGCGGGGGCCAACGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATCATTGCGAAGAAGGAATTATTTGATAATTGGGTTAGGTCGCATCCTGCAGCGAAGGGACTCTTGAACGAACCATTCCCGTATTACGACGAACTTACATATGTCTTCGGTCGCGATAGGGCGATCGGTCGGTTCGCTGAGACATTCGCCGACGTCGGGTCTAACGAGCTTGGTGACGGATATGACAGATTTGATATGGGAGATGGAAACGAGGAGTTCCCGCCCGTGTACAACCAGGGGATTGACCTCTCGCTGGACGATGTACGTGCATCCCAACCTTCTTGCACTTCAAAGGGTAGGACCGGATCCAGTGGATCCAAGAGGAAGAAGGGAAGTCAGCGAGACTTCGATGTTAAAGCGATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAGGCAGATTGCAGAGTGGCCTGCACGTACCCTTGCAAATGACAACCATGTGCGCACGAAATTATTCCGCATATTGTGTGAGATGCCAGAACTTACGAGTTTGGATAGGACGTTATTGCAAAGGCATCTTTTGTCTCGTATGAACGACCTTCAGGGTTTCGTACTCATGCCTGAGGATGAGAGGGAGAGATTTTGTAGAGTCCTACGAGACATTACGAGATAG

Coding sequence (CDS)

ATGTACGCGTGCCATGAATTTTATGTCAACCTCAAATTGTGCCCCGAGACATGTCTGAACGAAGGAGGAGGAGGGCACTCTTGTGGAATGTTTAATGGAGTTGGTGTCAATGGGGGATGGAAATCAGATAATGGTACGTTCCGCCCAGGTTACCTTGCGCAGTTAGTACGCATGACGGCGGAGAAACTACCTGGATGTCAGGTCCGAGCAACGACTGTAATTGATTGTAGAATTAAGACACTGAAGCGAACATTCCAGGCCATTGCCGAAATGCGGGGGCCAACGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATCATTGCGAAGAAGGAATTATTTGATAATTGGGTTAGGTCGCATCCTGCAGCGAAGGGACTCTTGAACGAACCATTCCCGTATTACGACGAACTTACATATGTCTTCGGTCGCGATAGGGCGATCGGTCGGTTCGCTGAGACATTCGCCGACGTCGGGTCTAACGAGCTTGGTGACGGATATGACAGATTTGATATGGGAGATGGAAACGAGGAGTTCCCGCCCGTGTACAACCAGGGGATTGACCTCTCGCTGGACGATGTACGTGCATCCCAACCTTCTTGCACTTCAAAGGGTAGGACCGGATCCAGTGGATCCAAGAGGAAGAAGGGAAGTCAGCGAGACTTCGATGTTAAAGCGATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAGGCAGATTGCAGAGTGGCCTGCACGTACCCTTGCAAATGACAACCATGTGCGCACGAAATTATTCCGCATATTGTGTGAGATGCCAGAACTTACGAGTTTGGATAGGACGTTATTGCAAAGGCATCTTTTGTCTCGTATGAACGACCTTCAGGGTTTCGTACTCATGCCTGAGGATGAGAGGGAGAGATTTTGTAGAGTCCTACGAGACATTACGAGATAG

Protein sequence

MYACHEFYVNLKLCPETCLNEGGGGHSCGMFNGVGVNGGWKSDNGTFRPGYLAQLVRMTAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPTCSGFGWNDEEKCIIAKKELFDNWVRSHPAAKGLLNEPFPYYDELTYVFGRDRAIGRFAETFADVGSNELGDGYDRFDMGDGNEEFPPVYNQGIDLSLDDVRASQPSCTSKGRTGSSGSKRKKGSQRDFDVKAIHLALDQTNEQLRQIAEWPARTLANDNHVRTKLFRILCEMPELTSLDRTLLQRHLLSRMNDLQGFVLMPEDERERFCRVLRDITR
Homology
[Close]
BLAST of MELO3C033188 vs. NCBI nr
Match: KAA0063862.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYJ95514.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 532.7 bits (1371), Expect = 2.1e-147
Identity = 259/275 (94.18%), Postives = 263/275 (95.64%), Query Frame = 0 

Query: 38  GGWKSDNGTFRPGYLAQLVRMTAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPTCS 97
           GGWKSDNGTF PGYLAQLVRMTA+KLPGCQVRATTVIDCRIKTLKRTFQ I EMRGPTCS
Sbjct: 7   GGWKSDNGTFCPGYLAQLVRMTAKKLPGCQVRATTVIDCRIKTLKRTFQVITEMRGPTCS 66

Query: 98  GFGWNDEEKCIIAKKELFDNWVRSHPAAKGLLNEPFPYYDELTYVFGRDRAIGRFAETFA 157
            FGWNDEEKCIIAKKELFDNWVRSHPAAKGLLNEPFPYYDELTYVF  DRAIGRF ETFA
Sbjct: 67  CFGWNDEEKCIIAKKELFDNWVRSHPAAKGLLNEPFPYYDELTYVFCCDRAIGRFVETFA 126

Query: 158 DVGSNELGDGYDRFDMGDGNEEFPPVYNQGIDLSLDDVRASQPSCTSKGRTGSSGSKRKK 217
           DVGSNE GDGYDRFDMGDGNEEFPPVYNQGIDLSLDDVR SQPSCTSKGRT SSGSKRKK
Sbjct: 127 DVGSNEPGDGYDRFDMGDGNEEFPPVYNQGIDLSLDDVRTSQPSCTSKGRTRSSGSKRKK 186

Query: 218 GSQRDFDVKAIHLALDQTNEQLRQIAEWPARTLANDNHVRTKLFRILCEMPELTSLDRTL 277
           GSQRDFDV+AIHLALDQTNEQLRQIAEWPARTLANDNHVRTK FRILCEMPELTSLDRTL
Sbjct: 187 GSQRDFDVEAIHLALDQTNEQLRQIAEWPARTLANDNHVRTKFFRILCEMPELTSLDRTL 246

Query: 278 LQRHLLSRMNDLQGFVLMPEDERERFCRVLRDITR 313
           LQRHLLSRM+DL+GFVLMPEDERE FCRVLRDITR
Sbjct: 247 LQRHLLSRMDDLRGFVLMPEDEREGFCRVLRDITR 281

[Close]
BLAST of MELO3C033188 vs. NCBI nr
Match: KAA0066208.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 509.2 bits (1310), Expect = 2.5e-140
Identity = 248/276 (89.86%), Postives = 260/276 (94.20%), Query Frame = 0 

Query: 38  GGWKSDNGTFRPGYLAQLVRMTAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPTCS 97
           GGWKSDNGTFRPGYLAQLVRM AEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGP CS
Sbjct: 31  GGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACS 90

Query: 98  GFGWNDEEKCIIAKKELFDNWVRSHPAAKGLLNEPFPYYDELTYVFGRDRAIGRFAETFA 157
           GFGWNDEEKCIIA+KELFDNWVRSHPAAKGLLN+PFPYYDELTYVFGRDRA GRFAETFA
Sbjct: 91  GFGWNDEEKCIIAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFA 150

Query: 158 DVGSNELGDGYDRFDMGDGNEEFPPVYNQGIDLSLDDVRASQPSCTSKGRTGSSGSKRKK 217
           DVGSNE G GYDRFDMGDGNE+FPPVY+QG+D+S DDVRAS+PS  S+GRTGSSGSKRK+
Sbjct: 151 DVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKR 210

Query: 218 GSQRDFDVKAIHLALDQTNEQLRQIAEWPARTLANDNHVRTKLFRILCEMPELTSLDRTL 277
           GSQRDFDV+AIHLALDQTNEQLRQIAEWPAR LANDNHVRT+ FRIL EMPELTSLDR L
Sbjct: 211 GSQRDFDVEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRAL 270

Query: 278 LQRHLLSRMNDLQGFVLMPEDERERFCRV-LRDITR 313
           LQRHLLSRM+DL GFVLMPEDERE FCRV LRDI R
Sbjct: 271 LQRHLLSRMDDLWGFVLMPEDEREGFCRVLLRDIER 306

[Close]
BLAST of MELO3C033188 vs. NCBI nr
Match: KAA0032766.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 507.3 bits (1305), Expect = 9.4e-140
Identity = 245/276 (88.77%), Postives = 261/276 (94.57%), Query Frame = 0 

Query: 38  GGWKSDNGTFRPGYLAQLVRMTAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPTCS 97
           GGWKSDNGTFRPGYLAQLVRM AEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGP CS
Sbjct: 31  GGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACS 90

Query: 98  GFGWNDEEKCIIAKKELFDNWVRSHPAAKGLLNEPFPYYDELTYVFGRDRAIGRFAETFA 157
           GFGWNDEEKCI+A+KELFDNWVRSHPAAKGLLN+PFPYYDELTYVFGRDRA GRFAETFA
Sbjct: 91  GFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFA 150

Query: 158 DVGSNELGDGYDRFDMGDGNEEFPPVYNQGIDLSLDDVRASQPSCTSKGRTGSSGSKRKK 217
           DVGSNE G GYDRFDMGDGNE+FPPVY+QG+D+S DDVRAS+PS  S+GRTGSSGSKRK+
Sbjct: 151 DVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKR 210

Query: 218 GSQRDFDVKAIHLALDQTNEQLRQIAEWPARTLANDNHVRTKLFRILCEMPELTSLDRTL 277
           GSQRDF+++AIHLALDQTNEQLRQIAEWPAR LANDNHVRT+ FRIL EMPELTSLDR L
Sbjct: 211 GSQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRAL 270

Query: 278 LQRHLLSRMNDLQGFVLMPEDERERFCRV-LRDITR 313
           LQRHLLSRM+DL+GFVLMPEDERE FCRV LRDI R
Sbjct: 271 LQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 306

[Close]
BLAST of MELO3C033188 vs. NCBI nr
Match: TYK21395.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK24245.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 507.3 bits (1305), Expect = 9.4e-140
Identity = 245/276 (88.77%), Postives = 261/276 (94.57%), Query Frame = 0 

Query: 38  GGWKSDNGTFRPGYLAQLVRMTAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPTCS 97
           GGWKSDNGTFRPGYLAQLVRM AEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGP CS
Sbjct: 31  GGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACS 90

Query: 98  GFGWNDEEKCIIAKKELFDNWVRSHPAAKGLLNEPFPYYDELTYVFGRDRAIGRFAETFA 157
           GFGWNDEEKCI+A+KELFDNWVRSHPAAKGLLN+PFPYYDELTYVFGRDRA GRFAETFA
Sbjct: 91  GFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFA 150

Query: 158 DVGSNELGDGYDRFDMGDGNEEFPPVYNQGIDLSLDDVRASQPSCTSKGRTGSSGSKRKK 217
           DVGSNE G GYDRFDMGDGNE+FPPVY+QG+D+S DDVRAS+PS  S+GRTGSSGSKRK+
Sbjct: 151 DVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKR 210

Query: 218 GSQRDFDVKAIHLALDQTNEQLRQIAEWPARTLANDNHVRTKLFRILCEMPELTSLDRTL 277
           GSQRDF+++AIHLALDQTNEQLRQIAEWPAR LANDNHVRT+ FRIL EMPELTSLDR L
Sbjct: 211 GSQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRAL 270

Query: 278 LQRHLLSRMNDLQGFVLMPEDERERFCRV-LRDITR 313
           LQRHLLSRM+DL+GFVLMPEDERE FCRV LRDI R
Sbjct: 271 LQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 306

[Close]
BLAST of MELO3C033188 vs. NCBI nr
Match: KAA0033744.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0044866.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0046274.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0049705.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0057135.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 506.1 bits (1302), Expect = 2.1e-139
Identity = 244/276 (88.41%), Postives = 261/276 (94.57%), Query Frame = 0 

Query: 38  GGWKSDNGTFRPGYLAQLVRMTAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPTCS 97
           GGWKSDNGTFRPGYLAQLVRM AEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGP CS
Sbjct: 31  GGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACS 90

Query: 98  GFGWNDEEKCIIAKKELFDNWVRSHPAAKGLLNEPFPYYDELTYVFGRDRAIGRFAETFA 157
           GFGWNDEEKCI+A+KELFDNWVRSHPAAKGLLN+PFPYYDELTYVFGRDRA GRFAETFA
Sbjct: 91  GFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFA 150

Query: 158 DVGSNELGDGYDRFDMGDGNEEFPPVYNQGIDLSLDDVRASQPSCTSKGRTGSSGSKRKK 217
           DVGSNE G GYDRFDMGDGNE+FPPVY+QG+D+S DDVRAS+PS  S+GRTGSSGSKRK+
Sbjct: 151 DVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKR 210

Query: 218 GSQRDFDVKAIHLALDQTNEQLRQIAEWPARTLANDNHVRTKLFRILCEMPELTSLDRTL 277
           GSQRDF+++AIHLALDQTNEQLR+IAEWPAR LANDNHVRT+ FRIL EMPELTSLDR L
Sbjct: 211 GSQRDFELEAIHLALDQTNEQLREIAEWPARNLANDNHVRTEFFRILREMPELTSLDRAL 270

Query: 278 LQRHLLSRMNDLQGFVLMPEDERERFCRV-LRDITR 313
           LQRHLLSRM+DL+GFVLMPEDERE FCRV LRDI R
Sbjct: 271 LQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 306

[Close]
BLAST of MELO3C033188 vs. ExPASy TrEMBL
Match: A0A5D3B9A8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold19391G00010 PE=4 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 1.0e-147
Identity = 259/275 (94.18%), Postives = 263/275 (95.64%), Query Frame = 0 

Query: 38  GGWKSDNGTFRPGYLAQLVRMTAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPTCS 97
           GGWKSDNGTF PGYLAQLVRMTA+KLPGCQVRATTVIDCRIKTLKRTFQ I EMRGPTCS
Sbjct: 7   GGWKSDNGTFCPGYLAQLVRMTAKKLPGCQVRATTVIDCRIKTLKRTFQVITEMRGPTCS 66

Query: 98  GFGWNDEEKCIIAKKELFDNWVRSHPAAKGLLNEPFPYYDELTYVFGRDRAIGRFAETFA 157
            FGWNDEEKCIIAKKELFDNWVRSHPAAKGLLNEPFPYYDELTYVF  DRAIGRF ETFA
Sbjct: 67  CFGWNDEEKCIIAKKELFDNWVRSHPAAKGLLNEPFPYYDELTYVFCCDRAIGRFVETFA 126

Query: 158 DVGSNELGDGYDRFDMGDGNEEFPPVYNQGIDLSLDDVRASQPSCTSKGRTGSSGSKRKK 217
           DVGSNE GDGYDRFDMGDGNEEFPPVYNQGIDLSLDDVR SQPSCTSKGRT SSGSKRKK
Sbjct: 127 DVGSNEPGDGYDRFDMGDGNEEFPPVYNQGIDLSLDDVRTSQPSCTSKGRTRSSGSKRKK 186

Query: 218 GSQRDFDVKAIHLALDQTNEQLRQIAEWPARTLANDNHVRTKLFRILCEMPELTSLDRTL 277
           GSQRDFDV+AIHLALDQTNEQLRQIAEWPARTLANDNHVRTK FRILCEMPELTSLDRTL
Sbjct: 187 GSQRDFDVEAIHLALDQTNEQLRQIAEWPARTLANDNHVRTKFFRILCEMPELTSLDRTL 246

Query: 278 LQRHLLSRMNDLQGFVLMPEDERERFCRVLRDITR 313
           LQRHLLSRM+DL+GFVLMPEDERE FCRVLRDITR
Sbjct: 247 LQRHLLSRMDDLRGFVLMPEDEREGFCRVLRDITR 281

[Close]
BLAST of MELO3C033188 vs. ExPASy TrEMBL
Match: A0A5A7VES2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G002250 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.2e-140
Identity = 248/276 (89.86%), Postives = 260/276 (94.20%), Query Frame = 0 

Query: 38  GGWKSDNGTFRPGYLAQLVRMTAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPTCS 97
           GGWKSDNGTFRPGYLAQLVRM AEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGP CS
Sbjct: 31  GGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACS 90

Query: 98  GFGWNDEEKCIIAKKELFDNWVRSHPAAKGLLNEPFPYYDELTYVFGRDRAIGRFAETFA 157
           GFGWNDEEKCIIA+KELFDNWVRSHPAAKGLLN+PFPYYDELTYVFGRDRA GRFAETFA
Sbjct: 91  GFGWNDEEKCIIAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFA 150

Query: 158 DVGSNELGDGYDRFDMGDGNEEFPPVYNQGIDLSLDDVRASQPSCTSKGRTGSSGSKRKK 217
           DVGSNE G GYDRFDMGDGNE+FPPVY+QG+D+S DDVRAS+PS  S+GRTGSSGSKRK+
Sbjct: 151 DVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKR 210

Query: 218 GSQRDFDVKAIHLALDQTNEQLRQIAEWPARTLANDNHVRTKLFRILCEMPELTSLDRTL 277
           GSQRDFDV+AIHLALDQTNEQLRQIAEWPAR LANDNHVRT+ FRIL EMPELTSLDR L
Sbjct: 211 GSQRDFDVEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRAL 270

Query: 278 LQRHLLSRMNDLQGFVLMPEDERERFCRV-LRDITR 313
           LQRHLLSRM+DL GFVLMPEDERE FCRV LRDI R
Sbjct: 271 LQRHLLSRMDDLWGFVLMPEDEREGFCRVLLRDIER 306

[Close]
BLAST of MELO3C033188 vs. ExPASy TrEMBL
Match: A0A5D3DCZ1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00020 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 4.6e-140
Identity = 245/276 (88.77%), Postives = 261/276 (94.57%), Query Frame = 0 

Query: 38  GGWKSDNGTFRPGYLAQLVRMTAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPTCS 97
           GGWKSDNGTFRPGYLAQLVRM AEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGP CS
Sbjct: 31  GGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACS 90

Query: 98  GFGWNDEEKCIIAKKELFDNWVRSHPAAKGLLNEPFPYYDELTYVFGRDRAIGRFAETFA 157
           GFGWNDEEKCI+A+KELFDNWVRSHPAAKGLLN+PFPYYDELTYVFGRDRA GRFAETFA
Sbjct: 91  GFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFA 150

Query: 158 DVGSNELGDGYDRFDMGDGNEEFPPVYNQGIDLSLDDVRASQPSCTSKGRTGSSGSKRKK 217
           DVGSNE G GYDRFDMGDGNE+FPPVY+QG+D+S DDVRAS+PS  S+GRTGSSGSKRK+
Sbjct: 151 DVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKR 210

Query: 218 GSQRDFDVKAIHLALDQTNEQLRQIAEWPARTLANDNHVRTKLFRILCEMPELTSLDRTL 277
           GSQRDF+++AIHLALDQTNEQLRQIAEWPAR LANDNHVRT+ FRIL EMPELTSLDR L
Sbjct: 211 GSQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRAL 270

Query: 278 LQRHLLSRMNDLQGFVLMPEDERERFCRV-LRDITR 313
           LQRHLLSRM+DL+GFVLMPEDERE FCRV LRDI R
Sbjct: 271 LQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 306

[Close]
BLAST of MELO3C033188 vs. ExPASy TrEMBL
Match: A0A5A7SRU1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold708G00100 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 4.6e-140
Identity = 245/276 (88.77%), Postives = 261/276 (94.57%), Query Frame = 0 

Query: 38  GGWKSDNGTFRPGYLAQLVRMTAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPTCS 97
           GGWKSDNGTFRPGYLAQLVRM AEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGP CS
Sbjct: 31  GGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACS 90

Query: 98  GFGWNDEEKCIIAKKELFDNWVRSHPAAKGLLNEPFPYYDELTYVFGRDRAIGRFAETFA 157
           GFGWNDEEKCI+A+KELFDNWVRSHPAAKGLLN+PFPYYDELTYVFGRDRA GRFAETFA
Sbjct: 91  GFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFA 150

Query: 158 DVGSNELGDGYDRFDMGDGNEEFPPVYNQGIDLSLDDVRASQPSCTSKGRTGSSGSKRKK 217
           DVGSNE G GYDRFDMGDGNE+FPPVY+QG+D+S DDVRAS+PS  S+GRTGSSGSKRK+
Sbjct: 151 DVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKR 210

Query: 218 GSQRDFDVKAIHLALDQTNEQLRQIAEWPARTLANDNHVRTKLFRILCEMPELTSLDRTL 277
           GSQRDF+++AIHLALDQTNEQLRQIAEWPAR LANDNHVRT+ FRIL EMPELTSLDR L
Sbjct: 211 GSQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRAL 270

Query: 278 LQRHLLSRMNDLQGFVLMPEDERERFCRV-LRDITR 313
           LQRHLLSRM+DL+GFVLMPEDERE FCRV LRDI R
Sbjct: 271 LQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 306

[Close]
BLAST of MELO3C033188 vs. ExPASy TrEMBL
Match: A0A5A7TRV1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold153G00290 PE=4 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 1.0e-139
Identity = 244/276 (88.41%), Postives = 261/276 (94.57%), Query Frame = 0 

Query: 38  GGWKSDNGTFRPGYLAQLVRMTAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPTCS 97
           GGWKSDNGTFRPGYLAQLVRM AEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGP CS
Sbjct: 31  GGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACS 90

Query: 98  GFGWNDEEKCIIAKKELFDNWVRSHPAAKGLLNEPFPYYDELTYVFGRDRAIGRFAETFA 157
           GFGWNDEEKCI+A+KELFDNWVRSHPAAKGLLN+PFPYYDELTYVFGRDRA GRFAETFA
Sbjct: 91  GFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFA 150

Query: 158 DVGSNELGDGYDRFDMGDGNEEFPPVYNQGIDLSLDDVRASQPSCTSKGRTGSSGSKRKK 217
           DVGSNE G GYDRFDMGDGNE+FPPVY+QG+D+S DDVRAS+PS  S+GRTGSSGSKRK+
Sbjct: 151 DVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKR 210

Query: 218 GSQRDFDVKAIHLALDQTNEQLRQIAEWPARTLANDNHVRTKLFRILCEMPELTSLDRTL 277
           GSQRDF+++AIHLALDQTNEQLR+IAEWPAR LANDNHVRT+ FRIL EMPELTSLDR L
Sbjct: 211 GSQRDFELEAIHLALDQTNEQLREIAEWPARNLANDNHVRTEFFRILREMPELTSLDRAL 270

Query: 278 LQRHLLSRMNDLQGFVLMPEDERERFCRV-LRDITR 313
           LQRHLLSRM+DL+GFVLMPEDERE FCRV LRDI R
Sbjct: 271 LQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 306

[Close]
BLAST of MELO3C033188 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 2.9e-06
Identity = 21/72 (29.17%), Postives = 40/72 (55.56%), Query Frame = 0 

Query: 73  VIDCRIKTLKRTFQAIAEMRGPTCSGFGWNDEEKCIIAKKELFDNWVRSHPAAKGLLNEP 132
           V+  R K+L+R F AI  +      GF W++E + + A   ++ +++++H  A+  +  P
Sbjct: 236 VLKNRYKSLRRQFNAIKSIL--RSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRP 295

Query: 133 FPYYDELTYVFG 145
            PYY +L  + G
Sbjct: 296 IPYYKDLCVLCG 305

[Close]
BLAST of MELO3C033188 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 50.4 bits (119), Expect = 2.9e-06
Identity = 21/72 (29.17%), Postives = 40/72 (55.56%), Query Frame = 0 

Query: 73  VIDCRIKTLKRTFQAIAEMRGPTCSGFGWNDEEKCIIAKKELFDNWVRSHPAAKGLLNEP 132
           V+  R K+L+R F AI  +      GF W++E + + A   ++ +++++H  A+  +  P
Sbjct: 236 VLKNRYKSLRRQFNAIKSIL--RSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRP 295

Query: 133 FPYYDELTYVFG 145
            PYY +L  + G
Sbjct: 296 IPYYKDLCVLCG 305

[Close]
BLAST of MELO3C033188 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 3.8e-06
Identity = 21/80 (26.25%), Postives = 44/80 (55.00%), Query Frame = 0 

Query: 73  VIDCRIKTLKRTFQAIAEMRGPTCSGFGWNDEEKCIIAKKELFDNWVRSHPAAKGLLNEP 132
           V+  R K L+R +  I  +     +GF W+     +IA  ++++ ++++HP A+    + 
Sbjct: 377 VLKNRYKHLRRLYNDIKFLLEQ--NGFSWDARRDMVIADDDIWNTYIQAHPEARSYRVKT 436

Query: 133 FPYYDELTYVFGRDRAIGRF 153
            P Y  L ++FG++ + GR+
Sbjct: 437 IPSYPNLCFIFGKETSDGRY 454

The following BLAST results are available for this feature:
BLAST of MELO3C033188 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0063862.12.1e-14794.18retrotransposon protein [Cucumis melo var. makuwa] >TYJ95514.1 retrotransposon p... [more]
KAA0066208.12.5e-14089.86retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0032766.19.4e-14088.77retrotransposon protein [Cucumis melo var. makuwa][more]
TYK21395.19.4e-14088.77retrotransposon protein [Cucumis melo var. makuwa] >TYK24245.1 retrotransposon p... [more]
KAA0033744.12.1e-13988.41retrotransposon protein [Cucumis melo var. makuwa] >KAA0044866.1 retrotransposon... [more]
BLAST of MELO3C033188 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033188 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3B9A81.0e-14794.18Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VES21.2e-14089.86Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DCZ14.6e-14088.77Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SRU14.6e-14088.77Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TRV11.0e-13988.41Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of MELO3C033188 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G02210.12.9e-0629.17unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G02210.22.9e-0629.17unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G24960.23.8e-0626.25unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..220
NoneNo IPR availablePANTHERPTHR46250:SF3MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEINcoord: 36..305
NoneNo IPR availablePANTHERPTHR46250MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATEDcoord: 36..305

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033188.1MELO3C033188.1mRNA