MELO3C033051.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C033051.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionARM REPEAT PROTEIN INTERACTING WITH ABF2-like
Locationchr08: 19419734 .. 19421019 (+)
RNA-Seq ExpressionMELO3C033051.jh1
SyntenyMELO3C033051.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTCACCGCGGTGTCCACTCTTATTCTCTCATCGACGGCTCCCTCACCATCTTCTTACTCTTCTTCTTCCTTCGCTAGGGCACAACAGCACTGCAGCATCCCAAATTTTGTGCTCCTTCCTCTTCTCCTTATGAACCTCTCTCCCTTGTCAATTCAAGCTCTACCTCGCTGGTTCTCATACTCACGGTATTGTATCTGTAAGTTTTTTTAAACCCTTTGAACTTCTTGTCGACTTCTCATGTTGGTTTTTGGGTTCTTCTTGAATTGTAAACAGTGTTATTCGTAGAGCTGCAGATGCCATTACAAATCTTGCGCATGAGAACATTTTCATCAAAACGCAAGTTAGGTATGTTTAGTTGATTCACTTTTAAGTTTTATAAGTTTCATTGAAGCCTGTTCTCAATGAGGATTTAAATATTTAGGATGGAAGGTGGGAATATTCATCCACTTGTTGAGTTGCTTGAATTTTACTAGCAATAAGGTTGAAAGACTACTGTTGGGGCATTATGAACATTGGCCTTTAAGAACGATGAGAATAAAAACCAGGTAATTGGCATTTTCCTTCAAATTGGATGTTTAACTTTAGGTTTAACATGTAAATCATTTGTTATCTTCGCTAACTGGCAGATTGTTGAGTGCAATGCTCTCCCCACACTGATTTTGATGCTTCATTCTGAGGATGTTGCTATACATTATGAAGCAGTAAGATTTTCTCAAGTCACAAACTGGAATATTTAGTACTTTTTAATGGAGTGATATTTGGTTTGCATTTTATAAAATATGAATTGTGCACTCATCCCCCAATATAAAGAGAGAAGTTCTTATCGCAAGAGCTTTGCAACCTGTTATTGAATTACTCAGGTATGCCAATCTTCAGAACTTTTGTTTGTTACTGCTTCACTACTTGTAATTTCAGGAATCTTGTTTTGTATATTACTGCTTCAACCCATATCTCATGCCCATCATCTCAATTTTCCTCTATTCTATCGTAGCTCGGTCAATCATAACTATTTATGCTGTGAAGACAAAGTTGATCTCCGGTAGTCTAAATCATGTTTACCCTTTTGTGTTAGTTCTTGCTGCTCTGAGAGTCAAAGGGAGGCAACATTATTACTTGGACAATTTGCGGCAACTGATTTGGATTGTAAGGTGAATAAAATTGATGATTTATTATTTTATAGCAACAATTTTGAAATGGAGAGTTGAGAATCTGTATACCTATTAAATTTGATTTATTGGAAAACAGAAGGGTAAATTATTCACTTTATAAGAGTGTTGTTGTGTGT

mRNA sequence

GCTCACCGCGGTGTCCACTCTTATTCTCTCATCGACGGCTCCCTCACCATCTTCTTACTCTTCTTCTTCCTTCGCTAGGGCACAACAGCACTGCAGCATCCCAAATTTTGTGCTCCTTCCTCTTCTCCTTATGAACCTCTCTCCCTTGTCAATTCAAGCTCTACCTCGCTGGTTCTCATACTCACGGTATTGTATCTAGCTGCAGATGCCATTACAAATCTTGCGCATGAGAACATTTTCATCAAAACGCAAGTTAGGATGGAAGGTGGGAATATTCATCCACTTGTTGAGTTGCTTGAATTTTACTAGCAATAAGGTTGAAAGACTACTGTTGGGGCATTATGAACATTGGCCTTTAAGAACGATGAGAATAAAAACCAGATTGTTGAGTGCAATGCTCTCCCCACACTGATTTTGATGCTTCATTCTGAGGATGTTGCTATACATTATGAAGCAAGCTTTGCAACCTGTTATTGAATTACTCAGTTCTTGCTGCTCTGAGAGTCAAAGGGAGGCAACATTATTACTTGGACAATTTGCGGCAACTGATTTGGATTGTAAGGTGAATAAAATTGATGATTTATTATTTTATAGCAACAATTTTGAAATGGAGAGTTGAGAATCTGTATACCTATTAAATTTGATTTATTGGAAAACAGAAGGGTAAATTATTCACTTTATAAGAGTGTTGTTGTGTGT

Coding sequence (CDS)

ATGCCATTACAAATCTTGCGCATGAGAACATTTTCATCAAAACGCAAGTTAGGATGGAAGGTGGGAATATTCATCCACTTGTTGAGTTGCTTGAATTTTACTAGCAATAAGGTTGAAAGACTACTGTTGGGGCATTATGAACATTGGCCTTTAAGAACGATGAGAATAAAAACCAGATTGTTGAGTGCAATGCTCTCCCCACACTGA

Protein sequence

MPLQILRMRTFSSKRKLGWKVGIFIHLLSCLNFTSNKVERLLLGHYEHWPLRTMRIKTRLLSAMLSPH
Homology
[Close]
BLAST of MELO3C033051.jh1 vs. NCBI nr
Match: XP_016903412.1 (PREDICTED: uncharacterized protein LOC103503176 [Cucumis melo])

HSP 1 Score: 131 bits (330), Expect = 1.84e-37
Identity = 62/68 (91.18%), Postives = 64/68 (94.12%), Query Frame = 0 

Query: 1   MPLQILRMRTFSSKRKLGWKVGIFIHLLSCLNFTSNKVERLLLGHYEHWPLRTMRIKTRL 60
           MPLQILRMRTFSSKR+LGWKVGIF+ LLSCLNFT  KVERLLLGHYEHWPLR MRIKTRL
Sbjct: 74  MPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKVERLLLGHYEHWPLRMMRIKTRL 133

Query: 61  LSAMLSPH 68
           LSAMLSPH
Sbjct: 134 LSAMLSPH 141

[Close]
BLAST of MELO3C033051.jh1 vs. NCBI nr
Match: TYK14188.1 (Vacuolar protein 8 [Cucumis melo var. makuwa])

HSP 1 Score: 72.0 bits (175), Expect = 1.74e-13
Identity = 32/38 (84.21%), Postives = 35/38 (92.11%), Query Frame = 0 

Query: 1   MPLQILRMRTFSSKRKLGWKVGIFIHLLSCLNFTSNKV 38
           MPLQILRMRTFSSKR+LGWKVGIF+ LLSCLNFT  K+
Sbjct: 74  MPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKI 111

[Close]
BLAST of MELO3C033051.jh1 vs. NCBI nr
Match: KAA0066624.1 (ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Cucumis melo var. makuwa])

HSP 1 Score: 72.0 bits (175), Expect = 2.41e-13
Identity = 32/38 (84.21%), Postives = 35/38 (92.11%), Query Frame = 0 

Query: 1   MPLQILRMRTFSSKRKLGWKVGIFIHLLSCLNFTSNKV 38
           MPLQILRMRTFSSKR+LGWKVGIF+ LLSCLNFT  K+
Sbjct: 74  MPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKI 111

[Close]
BLAST of MELO3C033051.jh1 vs. NCBI nr
Match: KAA0064939.1 (ARM REPEAT PROTEIN INTERACTING WITH ABF2-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 72.0 bits (175), Expect = 5.90e-13
Identity = 32/38 (84.21%), Postives = 35/38 (92.11%), Query Frame = 0 

Query: 1   MPLQILRMRTFSSKRKLGWKVGIFIHLLSCLNFTSNKV 38
           MPLQILRMRTFSSKR+LGWKVGIF+ LLSCLNFT  K+
Sbjct: 74  MPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKI 111

[Close]
BLAST of MELO3C033051.jh1 vs. ExPASy TrEMBL
Match: A0A1S4E5B3 (uncharacterized protein LOC103503176 OS=Cucumis melo OX=3656 GN=LOC103503176 PE=4 SV=1)

HSP 1 Score: 131 bits (330), Expect = 8.93e-38
Identity = 62/68 (91.18%), Postives = 64/68 (94.12%), Query Frame = 0 

Query: 1   MPLQILRMRTFSSKRKLGWKVGIFIHLLSCLNFTSNKVERLLLGHYEHWPLRTMRIKTRL 60
           MPLQILRMRTFSSKR+LGWKVGIF+ LLSCLNFT  KVERLLLGHYEHWPLR MRIKTRL
Sbjct: 74  MPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKVERLLLGHYEHWPLRMMRIKTRL 133

Query: 61  LSAMLSPH 68
           LSAMLSPH
Sbjct: 134 LSAMLSPH 141

[Close]
BLAST of MELO3C033051.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CSL1 (Vacuolar protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00040 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 8.43e-14
Identity = 32/38 (84.21%), Postives = 35/38 (92.11%), Query Frame = 0 

Query: 1   MPLQILRMRTFSSKRKLGWKVGIFIHLLSCLNFTSNKV 38
           MPLQILRMRTFSSKR+LGWKVGIF+ LLSCLNFT  K+
Sbjct: 74  MPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKI 111

[Close]
BLAST of MELO3C033051.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VH19 (ARM REPEAT PROTEIN INTERACTING WITH ABF2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold979G00410 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.17e-13
Identity = 32/38 (84.21%), Postives = 35/38 (92.11%), Query Frame = 0 

Query: 1   MPLQILRMRTFSSKRKLGWKVGIFIHLLSCLNFTSNKV 38
           MPLQILRMRTFSSKR+LGWKVGIF+ LLSCLNFT  K+
Sbjct: 74  MPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKI 111

[Close]
BLAST of MELO3C033051.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VHJ6 (ARM REPEAT PROTEIN INTERACTING WITH ABF2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002570 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.86e-13
Identity = 32/38 (84.21%), Postives = 35/38 (92.11%), Query Frame = 0 

Query: 1   MPLQILRMRTFSSKRKLGWKVGIFIHLLSCLNFTSNKV 38
           MPLQILRMRTFSSKR+LGWKVGIF+ LLSCLNFT  K+
Sbjct: 74  MPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKI 111

The following BLAST results are available for this feature:
BLAST of MELO3C033051.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016903412.11.84e-3791.18PREDICTED: uncharacterized protein LOC103503176 [Cucumis melo][more]
TYK14188.11.74e-1384.21Vacuolar protein 8 [Cucumis melo var. makuwa][more]
KAA0066624.12.41e-1384.21ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Cucumis melo var. makuwa][more]
KAA0064939.15.90e-1384.21ARM REPEAT PROTEIN INTERACTING WITH ABF2-like isoform X2 [Cucumis melo var. maku... [more]
BLAST of MELO3C033051.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033051.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4E5B38.93e-3891.18uncharacterized protein LOC103503176 OS=Cucumis melo OX=3656 GN=LOC103503176 PE=... [more]
A0A5D3CSL18.43e-1484.21Vacuolar protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G000... [more]
A0A5A7VH191.17e-1384.21ARM REPEAT PROTEIN INTERACTING WITH ABF2-like OS=Cucumis melo var. makuwa OX=119... [more]
A0A5A7VHJ62.86e-1384.21ARM REPEAT PROTEIN INTERACTING WITH ABF2-like isoform X2 OS=Cucumis melo var. ma... [more]
BLAST of MELO3C033051.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033051.jh1.t1MELO3C033051.jh1.t1mRNA