MELO3C033046.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C033046.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionAcetyl-CoA carboxylase 1-like
Locationchr08: 18682769 .. 18683732 (-)
RNA-Seq ExpressionMELO3C033046.jh1
SyntenyMELO3C033046.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACAGTTGAAGATGTGTTATGTTGTCGGAAACTAGAACTTAACGGATCAATCTCAAGGTAGCATTGTTGGTTCTGCATAATCGTATATATTTCAAATGGATTGTTGGTTGTTGATTATGTATTTTGTGTTGATATTTTTGTTATGAAATGCAATGGTAGGAAAGGGGAAGGCCTTTAATAACACTAGAGTGAAGCGGTCGATTAAGGTGCCCACGATTAGTAACAAGCTAGTAGATATGATGATTATTCATGGAGGAAATATGGCCAAAAGCCAATCAAGGCTTCTCCACACCCAAGGTATACAAATATGATTGCTTTACTTTTCAGTTTATTGTCTTGACGTTGCTTATTTCTTTATAGATTGATATTAGTTTTCATAATAATGTTATGTAAAAAAATGTTGATTATTCATTTGGCGGGCAATATTATGAGCTAATCAATTACAAGAGTTCATAGGATGCCACATAAAATATATTTTTTTATTTGGGAAAAGGATTGTATATGATTGCATCTATGGAATATTTCTAATATTAGATTGAAGAGATTTAGGAAAGCCTGATGGATGGGGTAGACTGAAGAGAGTTATGTGGATTGTGGTGTGGATATAAAATCTTAAGAACTTTTCATCCTTCTCTATAATTTTAGTGCTTCAAATAGCTTTGTTATTCTATAGATAAATGGTTTATTTGGATATTGTTTGTAGATAATTGAAGTCATATCAGGTTGAAAGCTAAGCGATTGTGCAGAGATGGCCAAGCGATCGTTGAAAATTGAAGACTGAGAAGGCATGTAGGATTTTTAATTATTTAATTCTTGTATTAGAATCTTTTCTCATGTACTATTGTAGAATGTATATATAAACATAATATTAAGATTTTATTTTGTGTATTCAAATGTAAAAGACAAATATTATAGTTTCTAACATAATATGAATTTCATTGATTTGTTGGCGTGTGAAAAACA

mRNA sequence

AAACAGTTGAAGATGTGTTATGTTGTCGGAAACTAGAACTTAACGGATCAATCTCAAGGTAGCATTGTTGGTTCTGCATAATCGTATATATTTCAAATGGATTGTTGGTTGTTGATTATGTATTTTGTGTTGATATTTTTGTTATGAAATGCAATGGTAGGAAAGGGGAAGGCCTTTAATAACACTAGAGTGAAGCGGTCGATTAAGGTGCCCACGATTAGTAACAAGCTAGTAGATATGATGATTATTCATGGAGGAAATATGGCCAAAAGCCAATCAAGGCTTCTCCACACCCAAGGAAAGCCTGATGGATGGGGTAGACTGAAGAGAGTTATGTGGATTGTGATAATTGAAGTCATATCAGGTTGAAAGCTAAGCGATTGTGCAGAGATGGCCAAGCGATCGTTGAAAATTGAAGACTGAGAAGGCATGTAGGATTTTTAATTATTTAATTCTTGTATTAGAATCTTTTCTCATGTACTATTGTAGAATGTATATATAAACATAATATTAAGATTTTATTTTGTGTATTCAAATGTAAAAGACAAATATTATAGTTTCTAACATAATATGAATTTCATTGATTTGTTGGCGTGTGAAAAACA

Coding sequence (CDS)

ATGGTAGGAAAGGGGAAGGCCTTTAATAACACTAGAGTGAAGCGGTCGATTAAGGTGCCCACGATTAGTAACAAGCTAGTAGATATGATGATTATTCATGGAGGAAATATGGCCAAAAGCCAATCAAGGCTTCTCCACACCCAAGGAAAGCCTGATGGATGGGGTAGACTGAAGAGAGTTATGTGGATTGTGATAATTGAAGTCATATCAGGTTGA

Protein sequence

MVGKGKAFNNTRVKRSIKVPTISNKLVDMMIIHGGNMAKSQSRLLHTQGKPDGWGRLKRVMWIVIIEVISG
Homology
[Close]
BLAST of MELO3C033046.jh1 vs. NCBI nr
Match: KAA0032276.1 (NAD-dependent protein deacylase SRT2 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 89.0 bits (219), Expect = 3.32e-20
Identity = 44/47 (93.62%), Postives = 44/47 (93.62%), Query Frame = 0 

Query: 3   GKGKAFNNTRVKRSIKVPTISNKLVDMMIIHGGNMAKSQSRLLHTQG 49
           GKGKAFNNTRVKRSIKVPTISNKL DMMIIH GNMAKSQSRLL TQG
Sbjct: 71  GKGKAFNNTRVKRSIKVPTISNKLADMMIIHRGNMAKSQSRLLRTQG 117

[Close]
BLAST of MELO3C033046.jh1 vs. NCBI nr
Match: KAA0065344.1 (ABC transporter I family member 6 [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 2.52e-18
Identity = 43/47 (91.49%), Postives = 44/47 (93.62%), Query Frame = 0 

Query: 3   GKGKAFNNTRVKRSIKVPTISNKLVDMMIIHGGNMAKSQSRLLHTQG 49
           GKGKAFNNTRVKRSIKVPTISNKL DMMII+ GNM KSQSRLLHTQG
Sbjct: 419 GKGKAFNNTRVKRSIKVPTISNKLADMMIIYRGNMTKSQSRLLHTQG 465

[Close]
BLAST of MELO3C033046.jh1 vs. NCBI nr
Match: KAA0045996.1 (acetyl-CoA carboxylase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 82.4 bits (202), Expect = 5.43e-17
Identity = 39/44 (88.64%), Postives = 42/44 (95.45%), Query Frame = 0 

Query: 1   MVGKGKAFNNTRVKRSIKVPTISNKLVDMMIIHGGNMAKSQSRL 44
           + GKGKAFNNTRVKRSIKVPTISNKL DMMIIHGGNMAKSQS++
Sbjct: 200 ITGKGKAFNNTRVKRSIKVPTISNKLADMMIIHGGNMAKSQSKI 243

[Close]
BLAST of MELO3C033046.jh1 vs. NCBI nr
Match: KAA0042275.1 (transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 80.5 bits (197), Expect = 4.50e-16
Identity = 41/52 (78.85%), Postives = 45/52 (86.54%), Query Frame = 0 

Query: 1   MVGKGKAFNNTRVK----RSIKVPTISNKLVDMMIIHGGNMAKSQSRLLHTQ 48
           ++ K KAFNNTRVK    RSIKVPTISN+L DMMIIHGGNMAKSQSR+LHTQ
Sbjct: 141 LIRKEKAFNNTRVKHRVKRSIKVPTISNRLADMMIIHGGNMAKSQSRVLHTQ 192

[Close]
BLAST of MELO3C033046.jh1 vs. NCBI nr
Match: KAA0042207.1 (triacylglycerol lipase 1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 80.1 bits (196), Expect = 1.20e-15
Identity = 41/52 (78.85%), Postives = 44/52 (84.62%), Query Frame = 0 

Query: 1   MVGKGKAFNNTRVKR----SIKVPTISNKLVDMMIIHGGNMAKSQSRLLHTQ 48
           + GKGKAFNNTRVK     SIKVPTISNKL DMMIIHGGNMAKSQS++L TQ
Sbjct: 299 ITGKGKAFNNTRVKHRVKWSIKVPTISNKLADMMIIHGGNMAKSQSKVLRTQ 350

[Close]
BLAST of MELO3C033046.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SQI0 (NAD-dependent protein deacylase SRT2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G001160 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.61e-20
Identity = 44/47 (93.62%), Postives = 44/47 (93.62%), Query Frame = 0 

Query: 3   GKGKAFNNTRVKRSIKVPTISNKLVDMMIIHGGNMAKSQSRLLHTQG 49
           GKGKAFNNTRVKRSIKVPTISNKL DMMIIH GNMAKSQSRLL TQG
Sbjct: 71  GKGKAFNNTRVKRSIKVPTISNKLADMMIIHRGNMAKSQSRLLRTQG 117

[Close]
BLAST of MELO3C033046.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VDI7 (ABC transporter I family member 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold301G00160 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.22e-18
Identity = 43/47 (91.49%), Postives = 44/47 (93.62%), Query Frame = 0 

Query: 3   GKGKAFNNTRVKRSIKVPTISNKLVDMMIIHGGNMAKSQSRLLHTQG 49
           GKGKAFNNTRVKRSIKVPTISNKL DMMII+ GNM KSQSRLLHTQG
Sbjct: 419 GKGKAFNNTRVKRSIKVPTISNKLADMMIIYRGNMTKSQSRLLHTQG 465

[Close]
BLAST of MELO3C033046.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TV25 (Acetyl-CoA carboxylase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005560 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.63e-17
Identity = 39/44 (88.64%), Postives = 42/44 (95.45%), Query Frame = 0 

Query: 1   MVGKGKAFNNTRVKRSIKVPTISNKLVDMMIIHGGNMAKSQSRL 44
           + GKGKAFNNTRVKRSIKVPTISNKL DMMIIHGGNMAKSQS++
Sbjct: 200 ITGKGKAFNNTRVKRSIKVPTISNKLADMMIIHGGNMAKSQSKI 243

[Close]
BLAST of MELO3C033046.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TLF6 (Transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00590 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.18e-16
Identity = 41/52 (78.85%), Postives = 45/52 (86.54%), Query Frame = 0 

Query: 1   MVGKGKAFNNTRVK----RSIKVPTISNKLVDMMIIHGGNMAKSQSRLLHTQ 48
           ++ K KAFNNTRVK    RSIKVPTISN+L DMMIIHGGNMAKSQSR+LHTQ
Sbjct: 141 LIRKEKAFNNTRVKHRVKRSIKVPTISNRLADMMIIHGGNMAKSQSRVLHTQ 192

[Close]
BLAST of MELO3C033046.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TKJ7 (Triacylglycerol lipase 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G007180 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 5.81e-16
Identity = 41/52 (78.85%), Postives = 44/52 (84.62%), Query Frame = 0 

Query: 1   MVGKGKAFNNTRVKR----SIKVPTISNKLVDMMIIHGGNMAKSQSRLLHTQ 48
           + GKGKAFNNTRVK     SIKVPTISNKL DMMIIHGGNMAKSQS++L TQ
Sbjct: 299 ITGKGKAFNNTRVKHRVKWSIKVPTISNKLADMMIIHGGNMAKSQSKVLRTQ 350

The following BLAST results are available for this feature:
BLAST of MELO3C033046.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0032276.13.32e-2093.62NAD-dependent protein deacylase SRT2 isoform X2 [Cucumis melo var. makuwa][more]
KAA0065344.12.52e-1891.49ABC transporter I family member 6 [Cucumis melo var. makuwa][more]
KAA0045996.15.43e-1788.64acetyl-CoA carboxylase 1-like [Cucumis melo var. makuwa][more]
KAA0042275.14.50e-1678.85transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 [Cucumis melo var. ma... [more]
KAA0042207.11.20e-1578.85triacylglycerol lipase 1 isoform X2 [Cucumis melo var. makuwa][more]
BLAST of MELO3C033046.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033046.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SQI01.61e-2093.62NAD-dependent protein deacylase SRT2 isoform X2 OS=Cucumis melo var. makuwa OX=1... [more]
A0A5A7VDI71.22e-1891.49ABC transporter I family member 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7TV252.63e-1788.64Acetyl-CoA carboxylase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A5A7TLF62.18e-1678.85Transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 OS=Cucumis melo var. ... [more]
A0A5A7TKJ75.81e-1678.85Triacylglycerol lipase 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
BLAST of MELO3C033046.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033046.jh1.t1MELO3C033046.jh1.t1mRNA