MELO3C032961 (gene) Melon (DHL92) v4

Overview
NameMELO3C032961
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionCopper centre Cu(A)
Locationchr08: 10427172 .. 10427491 (+)
RNA-Seq ExpressionMELO3C032961
SyntenyMELO3C032961
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGACTTTGATGACTTAAGGTGAATCCTATGGAGTGGGAAAGGAAAGTGAGGGGAAGAAGGGGCTGCCCTCGACCCGATCATCCTATTCGCTCTAACAGACAAGCATGGTTTTGTAGTCAAAGTTATATCATCACTTTCATGTAACCATCGGACAGTAGCCCTTTTGGGGGTTCCTTGGGGATAGTTTCACTCTGCGTATATTAACTGAATGCAGAAAGCCTTCCACTGGTAGGCGATCGTGCTTTTCAAAGGATTTCTTGTTACTCATGCCAGCATTCTCACTTTTGATATCTCCAAGTCTTGTCACCAAAAACCTTC

mRNA sequence

AAAGACTTTGATGACTTAAGGTGAATCCTATGGAGTGGGAAAGGAAAGTGAGGGGAAGAAGGGGCTGCCCTCGACCCGATCATCCTATTCGCTCTAACAGACAAGCATGGTTTTGTAGTCAAAGTTATATCATCACTTTCATGTAACCATCGGACAGTAGCCCTTTTGGGGGTTCCTTGGGGATAGTTTCACTCTGCGTATATTAACTGAATGCAGAAAGCCTTCCACTGGTAGGCGATCGTGCTTTTCAAAGGATTTCTTGTTACTCATGCCAGCATTCTCACTTTTGATATCTCCAAGTCTTGTCACCAAAAACCTTC

Coding sequence (CDS)

ATGGAGTGGGAAAGGAAAGTGAGGGGAAGAAGGGGCTGCCCTCGACCCGATCATCCTATTCGCTCTAACAGACAAGCATGGTTTTGTAGTCAAAGTTATATCATCACTTTCATGTAA

Protein sequence

MEWERKVRGRRGCPRPDHPIRSNRQAWFCSQSYIITFM
Homology
BLAST of MELO3C032961 vs. NCBI nr
Match: QCD98686.1 (hypothetical protein DEO72_LG6g3408 [Vigna unguiculata])

HSP 1 Score: 64.3 bits (155), Expect = 2.6e-07
Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 0

Query: 4   ERKVRGRRGCPRPDHPIRSNRQAWFCSQSYIITFM 39
           ER+VRGR G PRPDHPI SNRQAWFCSQS  +TF+
Sbjct: 188 ERRVRGRGGSPRPDHPIHSNRQAWFCSQSNFVTFV 222

BLAST of MELO3C032961 vs. NCBI nr
Match: KVH20946.1 (Copper centre Cu(A), partial [Cynara cardunculus var. scolymus])

HSP 1 Score: 64.3 bits (155), Expect = 2.6e-07
Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 0

Query: 4   ERKVRGRRGCPRPDHPIRSNRQAWFCSQSYIITFM 39
           ER+ RGR G PRPDHPIRSNRQAWFCSQS  +TF+
Sbjct: 339 ERRXRGRGGSPRPDHPIRSNRQAWFCSQSNFVTFV 373

BLAST of MELO3C032961 vs. NCBI nr
Match: KAA0066855.1 (hypothetical protein E6C27_scaffold271G002490 [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 4.4e-07
Identity = 25/34 (73.53%), Postives = 30/34 (88.24%), Query Frame = 0

Query: 5   RKVRGRRGCPRPDHPIRSNRQAWFCSQSYIITFM 39
           ++  GR GCPRPD+PIRSNRQAWFCSQSY +TF+
Sbjct: 186 KESEGRGGCPRPDYPIRSNRQAWFCSQSYFVTFV 219

BLAST of MELO3C032961 vs. NCBI nr
Match: KAA0051621.1 (Copper centre Cu(A) [Cucumis melo var. makuwa])

HSP 1 Score: 62.4 bits (150), Expect = 9.8e-07
Identity = 24/34 (70.59%), Postives = 30/34 (88.24%), Query Frame = 0

Query: 5   RKVRGRRGCPRPDHPIRSNRQAWFCSQSYIITFM 39
           ++  G+RG PRPDHPIRSN+QAWFCSQSY +TF+
Sbjct: 138 KESEGKRGSPRPDHPIRSNKQAWFCSQSYFVTFV 171

BLAST of MELO3C032961 vs. NCBI nr
Match: TYK28003.1 (hypothetical protein E5676_scaffold384G002400 [Cucumis melo var. makuwa])

HSP 1 Score: 60.5 bits (145), Expect = 3.7e-06
Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 0

Query: 5   RKVRGRRGCPRPDHPIRSNRQAWFCSQSYIITFM 39
           ++  GR GCPRPD+ IRSNRQAWFCSQSY +TF+
Sbjct: 186 KESEGRGGCPRPDYSIRSNRQAWFCSQSYFVTFV 219

BLAST of MELO3C032961 vs. ExPASy TrEMBL
Match: A0A4D6MF65 (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g3408 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-07
Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 0

Query: 4   ERKVRGRRGCPRPDHPIRSNRQAWFCSQSYIITFM 39
           ER+VRGR G PRPDHPI SNRQAWFCSQS  +TF+
Sbjct: 188 ERRVRGRGGSPRPDHPIHSNRQAWFCSQSNFVTFV 222

BLAST of MELO3C032961 vs. ExPASy TrEMBL
Match: A0A103TPE1 (Copper centre Cu(A) (Fragment) OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_025893 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-07
Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 0

Query: 4   ERKVRGRRGCPRPDHPIRSNRQAWFCSQSYIITFM 39
           ER+ RGR G PRPDHPIRSNRQAWFCSQS  +TF+
Sbjct: 339 ERRXRGRGGSPRPDHPIRSNRQAWFCSQSNFVTFV 373

BLAST of MELO3C032961 vs. ExPASy TrEMBL
Match: A0A5A7VM57 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G002490 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.1e-07
Identity = 25/34 (73.53%), Postives = 30/34 (88.24%), Query Frame = 0

Query: 5   RKVRGRRGCPRPDHPIRSNRQAWFCSQSYIITFM 39
           ++  GR GCPRPD+PIRSNRQAWFCSQSY +TF+
Sbjct: 186 KESEGRGGCPRPDYPIRSNRQAWFCSQSYFVTFV 219

BLAST of MELO3C032961 vs. ExPASy TrEMBL
Match: A0A5A7UDL7 (Copper centre Cu(A) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold5492G00100 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.7e-07
Identity = 24/34 (70.59%), Postives = 30/34 (88.24%), Query Frame = 0

Query: 5   RKVRGRRGCPRPDHPIRSNRQAWFCSQSYIITFM 39
           ++  G+RG PRPDHPIRSN+QAWFCSQSY +TF+
Sbjct: 138 KESEGKRGSPRPDHPIRSNKQAWFCSQSYFVTFV 171

BLAST of MELO3C032961 vs. ExPASy TrEMBL
Match: A0A5D3DWE9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G002400 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.8e-06
Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 0

Query: 5   RKVRGRRGCPRPDHPIRSNRQAWFCSQSYIITFM 39
           ++  GR GCPRPD+ IRSNRQAWFCSQSY +TF+
Sbjct: 186 KESEGRGGCPRPDYSIRSNRQAWFCSQSYFVTFV 219

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
QCD98686.12.6e-0777.14hypothetical protein DEO72_LG6g3408 [Vigna unguiculata][more]
KVH20946.12.6e-0777.14Copper centre Cu(A), partial [Cynara cardunculus var. scolymus][more]
KAA0066855.14.4e-0773.53hypothetical protein E6C27_scaffold271G002490 [Cucumis melo var. makuwa][more]
KAA0051621.19.8e-0770.59Copper centre Cu(A) [Cucumis melo var. makuwa][more]
TYK28003.13.7e-0670.59hypothetical protein E5676_scaffold384G002400 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A4D6MF651.2e-0777.14Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g3408 PE=4 SV=1[more]
A0A103TPE11.2e-0777.14Copper centre Cu(A) (Fragment) OS=Cynara cardunculus var. scolymus OX=59895 GN=C... [more]
A0A5A7VM572.1e-0773.53Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7UDL74.7e-0770.59Copper centre Cu(A) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold5492... [more]
A0A5D3DWE91.8e-0670.59Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032961.1MELO3C032961.1mRNA