MELO3C032953 (gene) Melon (DHL92) v4

Overview
NameMELO3C032953
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr03: 8485439 .. 8485642 (+)
RNA-Seq ExpressionMELO3C032953
SyntenyMELO3C032953
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGCGAAACACCCAACTACAACAATGGAAACCTCGAGCAGCAAAAAGGGATTTGAGGGGATTTGATGAGGGAGAACATAGAATGAAAGGGAAAAGGGTTTCGCACGAACACGAGTTGAGGGGAAAACCTAAACACGGGTTGAAGACGATAAGGCAGGGGAGGGTTTCGGCCGTTTGAGGGGAGAATGAAACTGTGTTAA

mRNA sequence

ATGGAAAGCGAAACACCCAACTACAACAATGGAAACCTCGAGCAGCAAAAAGGGATTTGAGGGGATTTGATGAGGGAGAACATAGAATGAAAGGGAAAAGGGTTTCGCACGAACACGAGTTGAGGGGAAAACCTAAACACGGGTTGAAGACGATAAGGCAGGGGAGGGTTTCGGCCGTTTGAGGGGAGAATGAAACTGTGTTAA

Coding sequence (CDS)

ATGAAAGGGAAAAGGGTTTCGCACGAACACGAGTTGAGGGGAAAACCTAAACACGGGTTGAAGACGATAAGGCAGGGGAGGGTTTCGGCCGTTTGA

Protein sequence

MKGKRVSHEHELRGKPKHGLKTIRQGRVSAV
Homology
BLAST of MELO3C032953 vs. NCBI nr
Match: TYK04868.1 (hypothetical protein E5676_scaffold143G00590 [Cucumis melo var. makuwa])

HSP 1 Score: 57.4 bits (137), Expect = 2.6e-05
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 0

Query: 2  KGKRVSHEHELRGKPKHGLKTIRQGRVSAV 32
          KGKRVSHEH LRGKP+HGLKT RQGRVSAV
Sbjct: 31 KGKRVSHEHGLRGKPEHGLKTTRQGRVSAV 60

BLAST of MELO3C032953 vs. NCBI nr
Match: TYK28137.1 (hypothetical protein E5676_scaffold289G00480 [Cucumis melo var. makuwa])

HSP 1 Score: 57.0 bits (136), Expect = 3.4e-05
Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 0

Query: 2  KGKRVSHEHELRGKPKHGLKTIRQGRVSAV 32
          KGKRV HEHELRGKP++GLKTIRQGRVSAV
Sbjct: 31 KGKRVLHEHELRGKPENGLKTIRQGRVSAV 60

BLAST of MELO3C032953 vs. NCBI nr
Match: KAA0061239.1 (hypothetical protein E6C27_scaffold455G00740 [Cucumis melo var. makuwa] >TYJ99958.1 hypothetical protein E5676_scaffold5168G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 56.2 bits (134), Expect = 5.7e-05
Identity = 27/31 (87.10%), Postives = 28/31 (90.32%), Query Frame = 0

Query: 1  MKGKRVSHEHELRGKPKHGLKTIRQGRVSAV 32
          MKGK VSHEH LRGKP+HGLKTIRQ RVSAV
Sbjct: 30 MKGKSVSHEHGLRGKPEHGLKTIRQERVSAV 60

BLAST of MELO3C032953 vs. NCBI nr
Match: ADN33713.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 54.7 bits (130), Expect = 1.7e-04
Identity = 26/31 (83.87%), Postives = 27/31 (87.10%), Query Frame = 0

Query: 1  MKGKRVSHEHELRGKPKHGLKTIRQGRVSAV 32
          MK KRVSHEH LRGKP+HGLKTIRQGRV  V
Sbjct: 30 MKEKRVSHEHGLRGKPEHGLKTIRQGRVLTV 60

BLAST of MELO3C032953 vs. NCBI nr
Match: KAA0047776.1 (hypothetical protein E6C27_scaffold133G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 52.4 bits (124), Expect = 8.3e-04
Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0

Query: 2  KGKRVSHEHELRGKPKHGLKTIRQGRVSAV 32
          KGKRVSHEH LRGKP+H LKTIR GRVS V
Sbjct: 31 KGKRVSHEHGLRGKPEHRLKTIRHGRVSIV 60

BLAST of MELO3C032953 vs. ExPASy TrEMBL
Match: A0A5D3C0R8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G00590 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-05
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 0

Query: 2  KGKRVSHEHELRGKPKHGLKTIRQGRVSAV 32
          KGKRVSHEH LRGKP+HGLKT RQGRVSAV
Sbjct: 31 KGKRVSHEHGLRGKPEHGLKTTRQGRVSAV 60

BLAST of MELO3C032953 vs. ExPASy TrEMBL
Match: A0A5D3DWE7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00480 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.6e-05
Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 0

Query: 2  KGKRVSHEHELRGKPKHGLKTIRQGRVSAV 32
          KGKRV HEHELRGKP++GLKTIRQGRVSAV
Sbjct: 31 KGKRVLHEHELRGKPENGLKTIRQGRVSAV 60

BLAST of MELO3C032953 vs. ExPASy TrEMBL
Match: A0A5A7V6A8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5168G00010 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.8e-05
Identity = 27/31 (87.10%), Postives = 28/31 (90.32%), Query Frame = 0

Query: 1  MKGKRVSHEHELRGKPKHGLKTIRQGRVSAV 32
          MKGK VSHEH LRGKP+HGLKTIRQ RVSAV
Sbjct: 30 MKGKSVSHEHGLRGKPEHGLKTIRQERVSAV 60

BLAST of MELO3C032953 vs. ExPASy TrEMBL
Match: E5GB71 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 8.1e-05
Identity = 26/31 (83.87%), Postives = 27/31 (87.10%), Query Frame = 0

Query: 1  MKGKRVSHEHELRGKPKHGLKTIRQGRVSAV 32
          MK KRVSHEH LRGKP+HGLKTIRQGRV  V
Sbjct: 30 MKEKRVSHEHGLRGKPEHGLKTIRQGRVLTV 60

BLAST of MELO3C032953 vs. ExPASy TrEMBL
Match: A0A5A7U0L7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00090 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.0e-04
Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0

Query: 2  KGKRVSHEHELRGKPKHGLKTIRQGRVSAV 32
          KGKRVSHEH LRGKP+H LKTIR GRVS V
Sbjct: 31 KGKRVSHEHGLRGKPEHRLKTIRHGRVSIV 60

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK04868.12.6e-0590.00hypothetical protein E5676_scaffold143G00590 [Cucumis melo var. makuwa][more]
TYK28137.13.4e-0590.00hypothetical protein E5676_scaffold289G00480 [Cucumis melo var. makuwa][more]
KAA0061239.15.7e-0587.10hypothetical protein E6C27_scaffold455G00740 [Cucumis melo var. makuwa] >TYJ9995... [more]
ADN33713.11.7e-0483.87hypothetical protein [Cucumis melo subsp. melo][more]
KAA0047776.18.3e-0483.33hypothetical protein E6C27_scaffold133G00090 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3C0R81.2e-0590.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DWE71.6e-0590.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V6A82.8e-0587.10Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
E5GB718.1e-0583.87Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
A0A5A7U0L74.0e-0483.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032953.1MELO3C032953.1mRNA