MELO3C032725 (gene) Melon (DHL92) v4

Overview
NameMELO3C032725
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionGag protease polyprotein
Locationchr07: 14476332 .. 14479851 (+)
RNA-Seq ExpressionMELO3C032725
SyntenyMELO3C032725
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACGTCGTCGCTTCGTCAGTTGCGCTCTTCTTCGCGTCTCCTTTGCCGTTCACCGCGCCGCTCCGCCCAGCAATCATCGACAAGCTTCTCCGATCGTGGGTCGTCGGATTCTCACTTGCCCAAACCGAGCGCAGCTCCAACCGCGCCGCACGACCTGAGCCACTGACCCGCAAGCCAATTCCAGCCTTAACGAGCCATCGAGCCATTCCTATGTGAACAAAGCTGAGCCGCACGTGACTTTAGCCAAGTCGCCTCTGCGTTGCGAGCCGCCCTATGCGTGTGAAGTCGCCTACCCGAGCCGTTTCTGTCTTCGAGCCAAGCTGCCTAGCTGTTTCTCTTTAGCCGAGCCATTTTTGAGCCACATAGCTTATTCTTTGGCTTTTTCACCTATATTTTTGGTAAGTTTGATTTGGGTTTCGTTTTTGCCCAAGAAGAAGTTAGTTGGAATCTAAATAGTTTAATTATGGATTTAATTGAATTATTTTTCATGATAGATCAATTGCAAGTTGTACTGAAGAATTTTCCTAAACCAAGGATAAATTTGGATTTATCTTCAACTTTGGGTAAGTTGAAATAATTGGAGTTTGGTCCCTAGGCGACTGTTAATTAATTTATTAATTTTACTTATTGGGTTCACTTGTGTTTAGGACTTGATTGTTGGGAAGCTTGACCGTGACTGTTAGGATAATTTTGGTGTGAGCTAATCTCCAGGTAAGAGATTCTAATACTAGACCCTCGAACTGAATTTAAAAGACCGCATGTATTTATGGTTATGCATTAATGATAGCTAAAATGTATAACTAGATGCTCTTGATGATGACTGTCATTATATGGGTGCTTGATGATGATAGATGTTAACATGTTTATTACTGTTAGTATATTGATGATGACTACTGTGTTATGTCTTTGATGACTATGTTTAATTAAAATGACATGATCAATACTTATGCCATGCTTATGATAATGTATGTTATGTTACATGCTATGGTTAGGTTGTGCTGTTAGCTTCAACTATTAGAGTCGTACTCACATAGGTGTCCTTCGGGATCCCCACCCTTTTATGACTGTGTAGTTCGACGGGATCACCAGTCCAATATGACATAGACATAGACATGATTATGAGCGACTCGAAGGGGTCATTCATAGCCCGATTGTCTTAGTGTTTCCTTCGAGTACACTAAAGACCAGTAGTCCTAGGTGTTCCTTTGGGTTCATCGAAAAGCAGATATGTCCCTGCGGGATCACAGATTACACGTGTTCGGAAACGTGCTAGTTTAGGGGTACCACTTTACAGGACTCTAATAAGAAGTTAACAAGTACCTAGCGGGACTAGTAATGGGTCCCTTACTGAGTATATTTTTATACTCACTCTTTCTTATTTAATTTTTCAGGCAAAGGTAGAGGTAAGGGCAGAGGCACTACAAGAAATTTTACCTTTGTCGATGACAAACATGCCGACGTCCTTAAAGTTTGTCGGTAGAAGTGGTATACGTCGACGACAAAAATTATAGCGTTGGCGTAGATATGTTTTTGACGACTACATATTTTTGACCGTCGATATTTGTAGACATATGCAGACGGTGGATTATGACCGTCGACTTAGATGGACAAACGACGACGAAATTAAAATTACTGTCGGCAATTCTTTTAAAACAAAAGTAGAGTTTTTCTTTTCTTTCCGATCTTGTCTTTCTTCTCCCAAAATACGCCGACGCAGCCGAGAACATTTGTAGACGACTTCTCTGCCACCAACACCCTCCATCGACCTCTGCTTCTTCTTCCCAATTCTGATTCAATCGGCCGCCAACCGTTGCAAGTCTCCATTAGCCGCCGTCGTTAGAGTGCCCTCCTTTTTTCTTCTTTCTCCAATTCTTCTTCGTAAGTTCAAATTTAATTCCTTTCTTTTTCATTCTTACTTTCTTGTCAATTTATCATCCATTTTCATTATTCTGTATTTCCTAGGCCTGTTCTTGTTTCAATTTCAACTTAGAGTTTTGTTTGGATTGATTAGTGTAAATGGAATTTATAAATTTTTGTTTTAACTTTTAGGGCAAACATTTTAGAACCAATGAATTATGATTTTATTTAACAAATAGCTTCACATAATTACTACTCATAATCAACATACAAATTTAATGATTTTTGCTCTTAAAGATATTGCATAAAAGGTTAAGTACTGTTGAATCCAGTTGATGATCATCATGTTTTGGTTACTTTTTTGCTTGGATATAATAAGCATGTGTGGTATAAAGTGAATTTTCTTGTAATAAAATTGCATTGAAATTTAAGATCTTGAGAAATTTTGATACTTATAGCCTAAAATGTATAGTGGTTTCTTGGTTCATTTGCTCAACCAAATTGTGTCTATGAATAGTCAAATGCCTCAAGATACAGTTTGTTAAAATGTATTGTTTGGATGGTTGTTTTTGTTAATTTTTTGGTTATGTAAAGTTTGATTATTTAGTATGAAGTAGTTATGTTTTGGTTGTAGAGAAAGGTTCATGAACATAGGTTTAGATTTGAAGTTTAGATTTGTTTTCTTGGATGTGGAATGAAATATAATTTTTTTTTTGTAAGTTGTTTTTGTTTTTTATATGGTTTTGGTTATGTAAAGTTGGATTAAGGAGTTTTTAGTAGATGTAAGTTGTTATGTTTTGGTATGTAGAGAAAGGTTTATGAACATAGGTTTAGATTTCAAGTTGAGATTTGTTTTTCTAAATGTGGGATGACAAAATGTAAGATGGCTGTCATTGTTTTGGTTATGTAAAGTTGGATTAAGGAGTTTAGTAGATGTAAGTTGTTATGTTTTGGTATATAGAGAAAGGTTTATGAACATAGGTTTATATTTTGCGTTTAGATTTGTCTTTTTGAATGTGGGATGAGAAAATGTAAAATGATTGTCATTGTTTTTGTAAGTTATTATTGGTTTGGTTATGTAAAGTTTGATTATTTAGTATGAAGTAGTTATGTTTTGGTTGTAGAGAAAGGTTCATGAACATAGGTATAGATTTGAAGTTTAGATTTGTTTTCTTGGATGTGGGATGAAATGTAGTTTTCTTTTTGTAAGTTATTGTTGTTTTTGTTATTGTTTTGGTTATGTAAAGTTTGATTATTTAGTATGTAACTGTTATTGTTTTAGTTGTAGAGAAAAGTATGTAACTTGTTGTTCTAAGTTTGTTTTTCAAGAAGTTAAAGAATGTAAAGTTTTTATGTATACATATGTGTGTGTGTGTGTAAAGTGTAAATTATACTTAGTTTATTAAATATGTTTCTATTGTTTTCTTTTTATTTGTTTTTCAGGTCCACCTTTCGATGAGGATCACTTCAAGAAAATTAGAAGTTTATGTAGTTTTATGTATTGTTGTAATTTTTGTTATTTTGGACGAATTTACTGTTTTGGCTTATATTAATTGTGTAAGAAACAATTGTAACTTTTGTTGAAACATTAAATGAATTTTAGTATTTTATATTTCTATAGTTTGAATTGTGTTTAGGTACAAACCAAAAGAATTGTTGA

mRNA sequence

ATGCACGTCGTCGCTTCGTCAGTTGCGCTCTTCTTCGCGTCTCCTTTGCCGTTCACCGCGCCGCTCCGCCCAGCAATCATCGACAAGCTTCTCCGATCGTGGGTCGTCGGATTCTCACTTGCCCAAACCGAGCGCAGCTCCAACCGCGCCGCACGACCTGAGCCACTGACCCGCAAGCCAATTCCAGCCTTAACGAGCCATCGAGCCATTCCTATTTCGACGGGATCACCAGTCCAATATGACATAGACATAGACATGATTATGAGCGACTCGAAGGGACCAGTAGTCCTAGGTGTTCCTTTGGGTTCATCGAAAAGCAGATATGTCCCTGCGGGATCACAGATTACACGTGTTCGGAAACGTGCTAGTTTAGGGGCAAAGGTAGAGGTAAGGGCAGAGGCACTACAAGAAATTTTACCTTTGTCGATGACAAACATGCCGACGTCCTTAAAACATATGCAGACGGTGGATTATGACCGTCGACTTAGATGGACAAACGACGACGAAATTAAAATTACTGTCGGCAATTCTTTTAAAACAAAAACGACTTCTCTGCCACCAACACCCTCCATCGACCTCTGCTTCTTCTTCCCAATTCTGATTCAATCGGCCGCCAACCGTTGCAAGTCTCCATTAGCCGCCGTCGTTAGAGTGCCCTCCTTTTTTCTTCTTTCTCCAATTCTTCTTCGTCCACCTTTCGATGAGGATCACTTCAAGAAAATTAGAAGTACAAACCAAAAGAATTGTTGA

Coding sequence (CDS)

ATGCACGTCGTCGCTTCGTCAGTTGCGCTCTTCTTCGCGTCTCCTTTGCCGTTCACCGCGCCGCTCCGCCCAGCAATCATCGACAAGCTTCTCCGATCGTGGGTCGTCGGATTCTCACTTGCCCAAACCGAGCGCAGCTCCAACCGCGCCGCACGACCTGAGCCACTGACCCGCAAGCCAATTCCAGCCTTAACGAGCCATCGAGCCATTCCTATTTCGACGGGATCACCAGTCCAATATGACATAGACATAGACATGATTATGAGCGACTCGAAGGGACCAGTAGTCCTAGGTGTTCCTTTGGGTTCATCGAAAAGCAGATATGTCCCTGCGGGATCACAGATTACACGTGTTCGGAAACGTGCTAGTTTAGGGGCAAAGGTAGAGGTAAGGGCAGAGGCACTACAAGAAATTTTACCTTTGTCGATGACAAACATGCCGACGTCCTTAAAACATATGCAGACGGTGGATTATGACCGTCGACTTAGATGGACAAACGACGACGAAATTAAAATTACTGTCGGCAATTCTTTTAAAACAAAAACGACTTCTCTGCCACCAACACCCTCCATCGACCTCTGCTTCTTCTTCCCAATTCTGATTCAATCGGCCGCCAACCGTTGCAAGTCTCCATTAGCCGCCGTCGTTAGAGTGCCCTCCTTTTTTCTTCTTTCTCCAATTCTTCTTCGTCCACCTTTCGATGAGGATCACTTCAAGAAAATTAGAAGTACAAACCAAAAGAATTGTTGA

Protein sequence

MHVVASSVALFFASPLPFTAPLRPAIIDKLLRSWVVGFSLAQTERSSNRAARPEPLTRKPIPALTSHRAIPISTGSPVQYDIDIDMIMSDSKGPVVLGVPLGSSKSRYVPAGSQITRVRKRASLGAKVEVRAEALQEILPLSMTNMPTSLKHMQTVDYDRRLRWTNDDEIKITVGNSFKTKTTSLPPTPSIDLCFFFPILIQSAANRCKSPLAAVVRVPSFFLLSPILLRPPFDEDHFKKIRSTNQKNC
Homology
[Close]
BLAST of MELO3C032725 vs. NCBI nr
Match: KAA0066997.1 (hypothetical protein E6C27_scaffold38G00260 [Cucumis melo var. makuwa] >TYJ96806.1 hypothetical protein E5676_scaffold233G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 59.7 bits (143), Expect = 4.2e-05
Identity = 32/42 (76.19%), Postives = 35/42 (83.33%), Query Frame = 0 

Query: 92  KGPVVLGVPLGSSKSRYVPAGSQITRVRKRASLGAKVEVRAE 134
           K   VLGVPLGS K+R VP GSQI RVR+RASLGA+VEVRAE
Sbjct: 24  KTSFVLGVPLGSPKTRDVPTGSQIARVRERASLGAEVEVRAE 65

[Close]
BLAST of MELO3C032725 vs. NCBI nr
Match: TYK01308.1 (hypothetical protein E5676_scaffold827G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 9.3e-05
Identity = 39/94 (41.49%), Postives = 50/94 (53.19%), Query Frame = 0 

Query: 48  NRAARPEPLTRKPIPALTSHRAIPISTGSPVQYDID-------IDMIMSDSKGPVVLGVP 107
           NR + P P T+    A   H      +  P   D         + + +S S   +VLGVP
Sbjct: 56  NRRSNPNPETQAAPTASNPHARAWAYSWQPRHRDFAAWKACFIVKIRLSKSPDQIVLGVP 115

Query: 108 LGSSKSRYVPAGSQITRVRKRASLGAKVEVRAEA 135
           LGS K+ YVP GS  TRVR+RAS  A+VEVRA+A
Sbjct: 116 LGSPKTSYVPPGSHFTRVRERASSWAEVEVRAKA 149

[Close]
BLAST of MELO3C032725 vs. NCBI nr
Match: KAA0051716.1 (hypothetical protein E6C27_scaffold60G001020 [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 9.3e-05
Identity = 39/94 (41.49%), Postives = 50/94 (53.19%), Query Frame = 0 

Query: 48  NRAARPEPLTRKPIPALTSHRAIPISTGSPVQYDID-------IDMIMSDSKGPVVLGVP 107
           NR + P P T+    A   H      +  P   D         + + +S S   +VLGVP
Sbjct: 56  NRRSNPNPETQAAPTASNPHARAWAYSWQPRHRDFAAWKACFIVKIRLSKSPDQIVLGVP 115

Query: 108 LGSSKSRYVPAGSQITRVRKRASLGAKVEVRAEA 135
           LGS K+ YVP GS  TRVR+RAS  A+VEVRA+A
Sbjct: 116 LGSPKTSYVPPGSHFTRVRERASSWAEVEVRAKA 149

[Close]
BLAST of MELO3C032725 vs. NCBI nr
Match: KAA0056319.1 (hypothetical protein E6C27_scaffold186G00040 [Cucumis melo var. makuwa] >TYK03195.1 hypothetical protein E5676_scaffold11G001070 [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 9.3e-05
Identity = 43/91 (47.25%), Postives = 51/91 (56.04%), Query Frame = 0 

Query: 48  NRAARPE--PLTR---KPIPALTSHRAIPISTGSPVQYDIDIDMIMSDSKGPVVLGVPLG 107
           +RAARP   PL R    P   L   RA   S  SP    +           PV+LGVPLG
Sbjct: 58  SRAARPSRTPLPRAELSPTTTLFKTRARSFSKPSPHVRPV-------REPRPVILGVPLG 117

Query: 108 SSKSRYVPAGSQITRVRKRASLGAKVEVRAE 134
           S K+R+VP GSQI  V++ A LGA+VEVRAE
Sbjct: 118 SPKTRHVPTGSQIAHVQEDAYLGAEVEVRAE 141

[Close]
BLAST of MELO3C032725 vs. NCBI nr
Match: KAA0040849.1 (hypothetical protein E6C27_scaffold333G00740 [Cucumis melo var. makuwa] >TYK17825.1 hypothetical protein E5676_scaffold306G00770 [Cucumis melo var. makuwa])

HSP 1 Score: 57.0 bits (136), Expect = 2.7e-04
Identity = 41/88 (46.59%), Postives = 50/88 (56.82%), Query Frame = 0 

Query: 48  NRAARPEPLTRKPIPALTSHRAI-PISTGSPVQYDIDIDMIMSDSKGPVVLGVPLGSSKS 107
           +R AR   L   P    +S  A+ PI      Q D  + +    +K   VLGVPLGSSK+
Sbjct: 29  SRLARVSHLPEPPSAFQSSRLAVSPIFQAGHSQPDC-LSVFFGYTKDQFVLGVPLGSSKT 88

Query: 108 RYVPAGSQITRVRKRASLGAKVEVRAEA 135
            YVP GSQI RV+ RAS  A+VEVRA A
Sbjct: 89  IYVPTGSQIARVKGRASSEAEVEVRARA 115

[Close]
BLAST of MELO3C032725 vs. ExPASy TrEMBL
Match: A0A5D3BCW4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00250 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.0e-05
Identity = 32/42 (76.19%), Postives = 35/42 (83.33%), Query Frame = 0 

Query: 92  KGPVVLGVPLGSSKSRYVPAGSQITRVRKRASLGAKVEVRAE 134
           K   VLGVPLGS K+R VP GSQI RVR+RASLGA+VEVRAE
Sbjct: 24  KTSFVLGVPLGSPKTRDVPTGSQIARVRERASLGAEVEVRAE 65

[Close]
BLAST of MELO3C032725 vs. ExPASy TrEMBL
Match: A0A5A7US28 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G001070 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.5e-05
Identity = 43/91 (47.25%), Postives = 51/91 (56.04%), Query Frame = 0 

Query: 48  NRAARPE--PLTR---KPIPALTSHRAIPISTGSPVQYDIDIDMIMSDSKGPVVLGVPLG 107
           +RAARP   PL R    P   L   RA   S  SP    +           PV+LGVPLG
Sbjct: 58  SRAARPSRTPLPRAELSPTTTLFKTRARSFSKPSPHVRPV-------REPRPVILGVPLG 117

Query: 108 SSKSRYVPAGSQITRVRKRASLGAKVEVRAE 134
           S K+R+VP GSQI  V++ A LGA+VEVRAE
Sbjct: 118 SPKTRHVPTGSQIAHVQEDAYLGAEVEVRAE 141

[Close]
BLAST of MELO3C032725 vs. ExPASy TrEMBL
Match: A0A5A7UBX8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G001020 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.5e-05
Identity = 39/94 (41.49%), Postives = 50/94 (53.19%), Query Frame = 0 

Query: 48  NRAARPEPLTRKPIPALTSHRAIPISTGSPVQYDID-------IDMIMSDSKGPVVLGVP 107
           NR + P P T+    A   H      +  P   D         + + +S S   +VLGVP
Sbjct: 56  NRRSNPNPETQAAPTASNPHARAWAYSWQPRHRDFAAWKACFIVKIRLSKSPDQIVLGVP 115

Query: 108 LGSSKSRYVPAGSQITRVRKRASLGAKVEVRAEA 135
           LGS K+ YVP GS  TRVR+RAS  A+VEVRA+A
Sbjct: 116 LGSPKTSYVPPGSHFTRVRERASSWAEVEVRAKA 149

[Close]
BLAST of MELO3C032725 vs. ExPASy TrEMBL
Match: A0A5D3BQM1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold827G00080 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.5e-05
Identity = 39/94 (41.49%), Postives = 50/94 (53.19%), Query Frame = 0 

Query: 48  NRAARPEPLTRKPIPALTSHRAIPISTGSPVQYDID-------IDMIMSDSKGPVVLGVP 107
           NR + P P T+    A   H      +  P   D         + + +S S   +VLGVP
Sbjct: 56  NRRSNPNPETQAAPTASNPHARAWAYSWQPRHRDFAAWKACFIVKIRLSKSPDQIVLGVP 115

Query: 108 LGSSKSRYVPAGSQITRVRKRASLGAKVEVRAEA 135
           LGS K+ YVP GS  TRVR+RAS  A+VEVRA+A
Sbjct: 116 LGSPKTSYVPPGSHFTRVRERASSWAEVEVRAKA 149

[Close]
BLAST of MELO3C032725 vs. ExPASy TrEMBL
Match: A0A5D3D283 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00770 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.3e-04
Identity = 41/88 (46.59%), Postives = 50/88 (56.82%), Query Frame = 0 

Query: 48  NRAARPEPLTRKPIPALTSHRAI-PISTGSPVQYDIDIDMIMSDSKGPVVLGVPLGSSKS 107
           +R AR   L   P    +S  A+ PI      Q D  + +    +K   VLGVPLGSSK+
Sbjct: 29  SRLARVSHLPEPPSAFQSSRLAVSPIFQAGHSQPDC-LSVFFGYTKDQFVLGVPLGSSKT 88

Query: 108 RYVPAGSQITRVRKRASLGAKVEVRAEA 135
            YVP GSQI RV+ RAS  A+VEVRA A
Sbjct: 89  IYVPTGSQIARVKGRASSEAEVEVRARA 115

The following BLAST results are available for this feature:
BLAST of MELO3C032725 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0066997.14.2e-0576.19hypothetical protein E6C27_scaffold38G00260 [Cucumis melo var. makuwa] >TYJ96806... [more]
TYK01308.19.3e-0541.49hypothetical protein E5676_scaffold827G00080 [Cucumis melo var. makuwa][more]
KAA0051716.19.3e-0541.49hypothetical protein E6C27_scaffold60G001020 [Cucumis melo var. makuwa][more]
KAA0056319.19.3e-0547.25hypothetical protein E6C27_scaffold186G00040 [Cucumis melo var. makuwa] >TYK0319... [more]
KAA0040849.12.7e-0446.59hypothetical protein E6C27_scaffold333G00740 [Cucumis melo var. makuwa] >TYK1782... [more]
BLAST of MELO3C032725 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C032725 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BCW42.0e-0576.19Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7US284.5e-0547.25Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UBX84.5e-0541.49Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BQM14.5e-0541.49Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3D2831.3e-0446.59Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C032725 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032725.1MELO3C032725.1mRNA