MELO3C032506 (gene) Melon (DHL92) v4

Overview
NameMELO3C032506
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionMethyltransferase type 11
Locationchr07: 15188813 .. 15189076 (+)
RNA-Seq ExpressionMELO3C032506
SyntenyMELO3C032506
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCTTCCTCTTCCTCCAAACCCCACAAACCTGCATTCCCCCAAATTATCCTTCAAAACCCTATCTTAAATTTCCCAAATCCTCCTGAGATTCCACTCCTCGCGAGCTCGTCTCCATTGACAAGAAGAACAAGCGTCTTTGGTCATCCAACGACTGGAAGAAGAAGCTCTCCTCCTTCATTAATTTCTTCCAATCCATTCGAGATCTAGGCCTTCTCCATAACCACACCAAAGTTATCTGCGTTTCTGCCGACGCTGGCCATGAG

mRNA sequence

ATCTTCCTCTTCCTCCAAACCCCACAAACCTGCATTCCCCCAAATTATCCTTCAAAACCCTATCTTAAATTTCCCAAATCCTCCTGAGATTCCACTCCTCGCGAGCTCGTCTCCATTGACAAGAAGAACAAGCGTCTTTGGTCATCCAACGACTGGAAGAAGAAGCTCTCCTCCTTCATTAATTTCTTCCAATCCATTCGAGATCTAGGCCTTCTCCATAACCACACCAAAGTTATCTGCGTTTCTGCCGACGCTGGCCATGAG

Coding sequence (CDS)

TCTTCCTCTTCCTCCAAACCCCACAAACCTGCATTCCCCCAAATTATCCTTCAAAACCCTATCTTAAATTTCCCAAATCCTCCTGAGATTCCACTCCTCGCGAGCTCGTCTCCATTGACAAGAAGAACAAGCGTCTTTGGTCATCCAACGACTGGAAGAAGAAGCTCTCCTCCTTCATTAATTTCTTCCAATCCATTCGAGATCTAG

Protein sequence

SSSSSKPHKPAFPQIILQNPILNFPNPPEIPLLASSSPLTRRTSVFGHPTTGRRSSPPSLISSNPFEI
Homology
[Close]
BLAST of MELO3C032506 vs. NCBI nr
Match: KAA0038914.1 (Methyltransferase type 11 [Cucumis melo var. makuwa])

HSP 1 Score: 99.4 bits (246), Expect = 1.3e-17
Identity = 50/56 (89.29%), Postives = 51/56 (91.07%), Query Frame = 0 

Query: 13 PQIILQNPILNFPNPPEIPLLASSSPLTRRTSVFGHPTTGRRSSPPSLISSNPFEI 69
          PQI+LQNPI N PN   IPLLASSSPLTRRTSVFGHPTTGRRSSPPSLISSNPFEI
Sbjct: 37 PQILLQNPISNSPNSSTIPLLASSSPLTRRTSVFGHPTTGRRSSPPSLISSNPFEI 92

[Close]
BLAST of MELO3C032506 vs. ExPASy TrEMBL
Match: A0A5A7T5Z3 (Methyltransferase type 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1170G00830 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 6.3e-18
Identity = 50/56 (89.29%), Postives = 51/56 (91.07%), Query Frame = 0 

Query: 13 PQIILQNPILNFPNPPEIPLLASSSPLTRRTSVFGHPTTGRRSSPPSLISSNPFEI 69
          PQI+LQNPI N PN   IPLLASSSPLTRRTSVFGHPTTGRRSSPPSLISSNPFEI
Sbjct: 37 PQILLQNPISNSPNSSTIPLLASSSPLTRRTSVFGHPTTGRRSSPPSLISSNPFEI 92

The following BLAST results are available for this feature:
BLAST of MELO3C032506 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0038914.11.3e-1789.29Methyltransferase type 11 [Cucumis melo var. makuwa][more]
BLAST of MELO3C032506 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C032506 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T5Z36.3e-1889.29Methyltransferase type 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo... [more]
BLAST of MELO3C032506 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..68

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032506.1MELO3C032506.1mRNA