MELO3C032354 (gene) Melon (DHL92) v4

Overview


Name	MELO3C032354
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Girdin-like
Location	chr06: 18850466 .. 18851361 (+)
RNA-Seq Expression	MELO3C032354
Synteny	MELO3C032354

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGTTAGATTTCAGTAGCCCAAGGAAGGAGGCTTGGTTGTCTTTCTTTGCAAAACTGACTTCTAAAAATGTCGTATGGAAGGCTCAATGGATGCCTTTAAAGGCGGTGATATATAGATGCAGAGATTTTCACAGTATGCCTTTGTTGGGACCATGGGGAGGTGTTAACTATACACCATTGTTAGTTTTGCGTCAAGTGTGGCTCAAACAGTTTATACCACCAACTCATAATTTGCAAGAGTCTGATTTTTCATACGATCCTGAAGATTGTCAAGGAAAAAAACGTCAAGCAGTATGCACTTGGAAATCTATAAGAAAGATAAAAGACAAAGGACATTACGAAGGAGTCATTAGTGGGTACGAGGCATGGCAGGCAAACAGAAGGAAGAATATAATAGATATCTCTAGGGAGGTAGTTGAAAGGGGAAAAAAGACAAGCTTCGAACAACCAAATCAGTGGATTGAGAAGAGCATAGAACTAGAAGAGAAAAATTGACTGTTAGAGCAAGAGAACGAGAAACTTCGTAAAGAGACAAGTCAATGGATGGATCATGCAACTTATTTGCAGAATGAACTCGAAAAGATTAAGAGTTTCTTAAAAAATCAAGATAAGTTAGAAAAAGATCTTGAGACTTTAGATAAGAAGATGAGACGAATGAATAAAGCAAATAAGAGCTTGAAAAATGAGAAGACAACATTACAAGCAACAGTGGGGTCGCAAGATGAATATATTAAAGATTTAGAAAATGGGAAGGAATATTTTCTCGAGCGTGTCAATGATTTGAATACATCAATTGGAAAACGAGAAACACAAATAATGGATTTGGAAGCACAAAATCATTCTTTGCGTCAAACTGTTGATAGCCTACATCTGAAGATGGCCGAGTGCTCTGAAGA

mRNA sequence

AGGTTAGATTTCAGTAGCCCAAGGAAGGAGGCTTGGTTGTCTTTCTTTGCAAAACTGACTTCTAAAAATGTCGTATGGAAGGCTCAATGGATGCCTTTAAAGGCGGTGATATATAGATGCAGAGATTTTCACAGTATGCCTTTGTTGGGACCATGGGGAGGTGTTAACTATACACCATTGTTAGTTTTGCGTCAAGTGTGGCTCAAACAGTTTATACCACCAACTCATAATTTGCAAGAGTCTGATTTTTCATACGATCCTGAAGATTGTCAAGGAAAAAAACGTCAAGCAGTATGCACTTGGAAATCTATAAGAAAGATAAAAGACAAAGGACATTACGAAGGAGTCATTAGTGGGTACGAGGCATGGCAGGCAAACAGAAGGAAGAATATAATAGATATCTCTAGGGAGGTAGTTGAAAGGGGAAAAAAGACAAGCTTCGAACAACCAAATCAGTGGATTGAGAAGAGCATAGAACTAGAAGAGAAAAATTGACTGTTAGAGCAAGAGAACGAGAAACTTCGTAAAGAGACAAGTCAATGGATGGATCATGCAACTTATTTGCAGAATGAACTCGAAAAGATTAAGAGTTTCTTAAAAAATCAAGATAAGTTAGAAAAAGATCTTGAGACTTTAGATAAGAAGATGAGACGAATGAATAAAGCAAATAAGAGCTTGAAAAATGAGAAGACAACATTACAAGCAACAGTGGGGTCGCAAGATGAATATATTAAAGATTTAGAAAATGGGAAGGAATATTTTCTCGAGCGTGTCAATGATTTGAATACATCAATTGGAAAACGAGAAACACAAATAATGGATTTGGAAGCACAAAATCATTCTTTGCGTCAAACTGTTGATAGCCTACATCTGAAGATGGCCGAGTGCTCTGAAGA

Coding sequence (CDS)

ATGCCTTTAAAGGCGGTGATATATAGATGCAGAGATTTTCACAGTATGCCTTTGTTGGGACCATGGGGAGGTGTTAACTATACACCATTGTTAGTTTTGCGTCAAGTGTGGCTCAAACAGTTTATACCACCAACTCATAATTTGCAAGAGTCTGATTTTTCATACGATCCTGAAGATTGTCAAGGAAAAAAACGTCAAGCAGTATGCACTTGGAAATCTATAAGAAAGATAAAAGACAAAGGACATTACGAAGGAGTCATTAGTGGGTACGAGGCATGGCAGGCAAACAGAAGGAAGAATATAATAGATATCTCTAGGGAGGTAGTTGAAAGGGGAAAAAAGACAAGCTTCGAACAACCAAATCAGTGGATTGAGAAGAGCATAGAACTAGAAGAGAAAAATTGA

Protein sequence

MPLKAVIYRCRDFHSMPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDCQGKKRQAVCTWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDISREVVERGKKTSFEQPNQWIEKSIELEEKN

Homology

[Close]

BLAST of MELO3C032354 vs. NCBI nr
Match: TYK16558.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 278.1 bits (710), Expect = 4.0e-71
Identity = 129/134 (96.27%), Postives = 131/134 (97.76%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSMPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           MPLKAVIYRC DFHS+PLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC
Sbjct: 33  MPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 92

Query: 61  QGKKRQAVCTWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDISREVVERGKKTSFEQP 120
           QGKKRQAVC WKSIRKIKDKGHYEGV SGYEAWQANRRKNIIDISREVVERGK+TSFEQP
Sbjct: 93  QGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGKETSFEQP 152

Query: 121 NQWIEKSIELEEKN 135
           NQWIEKSIELEEKN
Sbjct: 153 NQWIEKSIELEEKN 166

[Close]

BLAST of MELO3C032354 vs. NCBI nr
Match: KAA0044912.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 278.1 bits (710), Expect = 4.0e-71
Identity = 129/134 (96.27%), Postives = 131/134 (97.76%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSMPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           MPLKAVIYRC DFHS+PLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC
Sbjct: 142 MPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 201

Query: 61  QGKKRQAVCTWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDISREVVERGKKTSFEQP 120
           QGKKRQAVC WKSIRKIKDKGHYEGV SGYEAWQANRRKNIIDISREVVERGK+TSFEQP
Sbjct: 202 QGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGKETSFEQP 261

Query: 121 NQWIEKSIELEEKN 135
           NQWIEKSIELEEKN
Sbjct: 262 NQWIEKSIELEEKN 275

[Close]

BLAST of MELO3C032354 vs. NCBI nr
Match: KAA0036941.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 275.8 bits (704), Expect = 2.0e-70
Identity = 128/134 (95.52%), Postives = 130/134 (97.01%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSMPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           MPLKAVIYRC DFHS+PLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC
Sbjct: 298 MPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 357

Query: 61  QGKKRQAVCTWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDISREVVERGKKTSFEQP 120
           QGKKRQAVC WKSIRKIKDKGHYEGV SGYEAWQANRRKNIIDISREVVE GK+TSFEQP
Sbjct: 358 QGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVESGKETSFEQP 417

Query: 121 NQWIEKSIELEEKN 135
           NQWIEKSIELEEKN
Sbjct: 418 NQWIEKSIELEEKN 431

[Close]

BLAST of MELO3C032354 vs. NCBI nr
Match: TYK23955.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 270.4 bits (690), Expect = 8.3e-69
Identity = 126/134 (94.03%), Postives = 129/134 (96.27%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSMPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           MPLKAVIYRC DFHS+PLLGPWGGVNY PLLVLRQVWLKQFIPPTHNLQESDFSYD EDC
Sbjct: 75  MPLKAVIYRCGDFHSVPLLGPWGGVNYLPLLVLRQVWLKQFIPPTHNLQESDFSYDLEDC 134

Query: 61  QGKKRQAVCTWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDISREVVERGKKTSFEQP 120
           QGKKRQAVC WKSIRKIKDKGHYEGV SGYEAWQANRRKNIIDISREVVERGK+TSFEQP
Sbjct: 135 QGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGKETSFEQP 194

Query: 121 NQWIEKSIELEEKN 135
           NQWI+KSIELEEKN
Sbjct: 195 NQWIKKSIELEEKN 208

[Close]

BLAST of MELO3C032354 vs. NCBI nr
Match: XP_016900531.1 (PREDICTED: girdin-like [Cucumis melo])

HSP 1 Score: 270.4 bits (690), Expect = 8.3e-69
Identity = 126/134 (94.03%), Postives = 129/134 (96.27%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSMPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           MPLKAVIYRC DFHS+PLLGPWGGVNY PLLVLRQVWLKQFIPPTHNLQESDFSYD EDC
Sbjct: 1   MPLKAVIYRCGDFHSVPLLGPWGGVNYLPLLVLRQVWLKQFIPPTHNLQESDFSYDLEDC 60

Query: 61  QGKKRQAVCTWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDISREVVERGKKTSFEQP 120
           QGKKRQAVC WKSIRKIKDKGHYEGV SGYEAWQANRRKNIIDISREVVERGK+TSFEQP
Sbjct: 61  QGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGKETSFEQP 120

Query: 121 NQWIEKSIELEEKN 135
           NQWI+KSIELEEKN
Sbjct: 121 NQWIKKSIELEEKN 134

[Close]

BLAST of MELO3C032354 vs. ExPASy TrEMBL
Match: A0A5D3CZ50 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003770 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.9e-71
Identity = 129/134 (96.27%), Postives = 131/134 (97.76%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSMPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           MPLKAVIYRC DFHS+PLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC
Sbjct: 33  MPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 92

Query: 61  QGKKRQAVCTWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDISREVVERGKKTSFEQP 120
           QGKKRQAVC WKSIRKIKDKGHYEGV SGYEAWQANRRKNIIDISREVVERGK+TSFEQP
Sbjct: 93  QGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGKETSFEQP 152

Query: 121 NQWIEKSIELEEKN 135
           NQWIEKSIELEEKN
Sbjct: 153 NQWIEKSIELEEKN 166

[Close]

BLAST of MELO3C032354 vs. ExPASy TrEMBL
Match: A0A5A7TNJ1 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002070 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.9e-71
Identity = 129/134 (96.27%), Postives = 131/134 (97.76%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSMPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           MPLKAVIYRC DFHS+PLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC
Sbjct: 142 MPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 201

Query: 61  QGKKRQAVCTWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDISREVVERGKKTSFEQP 120
           QGKKRQAVC WKSIRKIKDKGHYEGV SGYEAWQANRRKNIIDISREVVERGK+TSFEQP
Sbjct: 202 QGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGKETSFEQP 261

Query: 121 NQWIEKSIELEEKN 135
           NQWIEKSIELEEKN
Sbjct: 262 NQWIEKSIELEEKN 275

[Close]

BLAST of MELO3C032354 vs. ExPASy TrEMBL
Match: A0A5A7T5S7 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 9.6e-71
Identity = 128/134 (95.52%), Postives = 130/134 (97.01%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSMPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           MPLKAVIYRC DFHS+PLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC
Sbjct: 298 MPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 357

Query: 61  QGKKRQAVCTWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDISREVVERGKKTSFEQP 120
           QGKKRQAVC WKSIRKIKDKGHYEGV SGYEAWQANRRKNIIDISREVVE GK+TSFEQP
Sbjct: 358 QGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVESGKETSFEQP 417

Query: 121 NQWIEKSIELEEKN 135
           NQWIEKSIELEEKN
Sbjct: 418 NQWIEKSIELEEKN 431

[Close]

BLAST of MELO3C032354 vs. ExPASy TrEMBL
Match: A0A5D3DK34 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00110 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.0e-69
Identity = 126/134 (94.03%), Postives = 129/134 (96.27%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSMPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           MPLKAVIYRC DFHS+PLLGPWGGVNY PLLVLRQVWLKQFIPPTHNLQESDFSYD EDC
Sbjct: 75  MPLKAVIYRCGDFHSVPLLGPWGGVNYLPLLVLRQVWLKQFIPPTHNLQESDFSYDLEDC 134

Query: 61  QGKKRQAVCTWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDISREVVERGKKTSFEQP 120
           QGKKRQAVC WKSIRKIKDKGHYEGV SGYEAWQANRRKNIIDISREVVERGK+TSFEQP
Sbjct: 135 QGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGKETSFEQP 194

Query: 121 NQWIEKSIELEEKN 135
           NQWI+KSIELEEKN
Sbjct: 195 NQWIKKSIELEEKN 208

[Close]

BLAST of MELO3C032354 vs. ExPASy TrEMBL
Match: A0A1S4DX26 (girdin-like OS=Cucumis melo OX=3656 GN=LOC107990936 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.0e-69
Identity = 126/134 (94.03%), Postives = 129/134 (96.27%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSMPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           MPLKAVIYRC DFHS+PLLGPWGGVNY PLLVLRQVWLKQFIPPTHNLQESDFSYD EDC
Sbjct: 1   MPLKAVIYRCGDFHSVPLLGPWGGVNYLPLLVLRQVWLKQFIPPTHNLQESDFSYDLEDC 60

Query: 61  QGKKRQAVCTWKSIRKIKDKGHYEGVISGYEAWQANRRKNIIDISREVVERGKKTSFEQP 120
           QGKKRQAVC WKSIRKIKDKGHYEGV SGYEAWQANRRKNIIDISREVVERGK+TSFEQP
Sbjct: 61  QGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGKETSFEQP 120

Query: 121 NQWIEKSIELEEKN 135
           NQWI+KSIELEEKN
Sbjct: 121 NQWIKKSIELEEKN 134

The following BLAST results are available for this feature:

BLAST of MELO3C032354 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK16558.1	4.0e-71	96.27	girdin-like [Cucumis melo var. makuwa]	[more]
KAA0044912.1	4.0e-71	96.27	girdin-like [Cucumis melo var. makuwa]	[more]
KAA0036941.1	2.0e-70	95.52	girdin-like [Cucumis melo var. makuwa]	[more]
TYK23955.1	8.3e-69	94.03	girdin-like [Cucumis melo var. makuwa]	[more]
XP_016900531.1	8.3e-69	94.03	PREDICTED: girdin-like [Cucumis melo]	[more]

BLAST of MELO3C032354 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C032354 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CZ50	1.9e-71	96.27	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003770 PE...	[more]
A0A5A7TNJ1	1.9e-71	96.27	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002070 PE...	[more]
A0A5A7T5S7	9.6e-71	95.52	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=...	[more]
A0A5D3DK34	4.0e-69	94.03	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00110 PE...	[more]
A0A1S4DX26	4.0e-69	94.03	girdin-like OS=Cucumis melo OX=3656 GN=LOC107990936 PE=4 SV=1	[more]

BLAST of MELO3C032354 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR48200	PROTEIN, PUTATIVE-RELATED	coord: 2..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032354.1	MELO3C032354.1	mRNA