MELO3C032208 (gene) Melon (DHL92) v4

Overview
NameMELO3C032208
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Locationchr01: 21969653 .. 21976601 (-)
RNA-Seq ExpressionMELO3C032208
SyntenyMELO3C032208
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGATGTTGAAGAGATGGTTGCGATTTTCTTGCATATTGTAGCACACGATATTAAGAATAGGGTAGCCCGACGACATTTTGCAAGGTCAGGTGAAACAATGTCAAGACACTTCAATGTTGTTCTTAACACAGTTCTTAGACTCCATGAAATCCTTCTTAAGCAACCTGATCCAGTGACCCATTCATGTTCGCACGAGAAGTGGCGATGGTTTCAGGTATATAATCAGCCAGCCACTACTTTACAGTGGATATGTGCTTCTATGAACTGACAAATAAAATGTCTTGTTGTCACACCCTATTCTAAACTTCCCTCTAACCTAGAATCGTGGTGTGAATCTACTTGTAAAAGAATCCTTTTCAAACGTAAGTTTAAATAGATGCTTTTCGAAAATTTTATAAAAATTTTGGTGGCATCTCCCTTAAAATATGGGTTAGCCAAACCTGTAAAGAGGAGAAATTTTGCACTTTTATAAAAGTATGAACAACCACAGAATTCACAACACATCAAGTGTGTCTCACCACACACTTATCCATATAGTTCCATAGTTCCAGAGTTTCAAACAGACAACCATATTCTAATTAGATATGTCATACAAAATAAATCAATCAAAAGAGGGATCTCCCCAATCACGTGTTCTTAACCTTACTCTCGCTACAATCTAACCACTCCCTGATGTATTACAAAAGATAACTATATACATGCAAAAGAATAGTGGAGATCTATAACCAATGATGAGAATTCAATCAAACTCTTGGCCCTTGATTGCTACTTGAGGGGGGGGGGGGGCAGAGAAAACATTAAAAACATAAGTTGAATACTCAGTGAGTGGCAAGTTTCTTAAATGTAAAACTCATAAAACATACTTAAAGTGAAATATTATAAATATGCATTAGAAATATAATATTAGTGAAAAACGTCATTAACTCATAGCAATTAGTCCACCAACAAACCTGTAATTAGTACAACCATGACAAGGCATTTAAAGATACGACCAAAGATAGCTCGCACATGATAAAGAATCATGCGGCCAAAACTAGCTCACGCATTCTTAGTACCTACCATGGTAGCAACCGTCAACCAATCCAAACCAACCATGATAGGATAATAAGTATACGACTCGAGAATAGCTCACATGTGCCTCATATCCATAAGGAAACACGCAGCCGAACGAAGCTCACACATACTCAGCACCTACCATAGTAACTACATACCGCTCCTATGTGCACATAGAGCCACCACCATAAGCTAGACCTGAAGCCATATCTCAATCATCCATCCATGTCCTCACCTAGTCTCAGGTTCTCGAATCTCCAGTCACGACCTGTAACGACCCAACTTTCCGGACTAAGCTGAGGTCACTACTCAGTACTAAGACTCGACCACACAACACAAAATTTATAACGGACCGGTTACGATTTCTTAAAACGTTAGAAATATTACAAAAAAAAACAGTTTCGGGCCTTATTTTAAATCGCAGTCACAAAAGTTTCAAATAAAAACTCAGGTCATCAGCTCAAAATCACAAACCAAATATTCTAACAAAATACATCAGCGGAAGCAATAAGAAAACCAGACGCGTCCATATGGCCTTCACGCATCCTTCCTGCCTCTCATCGGTCTGCCCCTCGCTGTGCCCTTACCTAAAAAGTTTAAGAAGAGAAAAGGGTGAGTATAAACATACCCAGTAAGGGACCCACTACTGGGTCCGTTAGGGAACAACAGTTAACTTCCTATTCAGGGGTACCCTACATAACAGTCTAGTGGTTCCGTAGAACACACATATCAGTCTAGTGCTCCCGGAGGATGCACATATCAGTCTAGTGCTCCCGAAGGATGCACATATCAGTCTAGTGCTCCCGCAGAATGCACATATCCGTAAGGTACACTACCCCATAGATGAAGCTAACCGTTACCCCTCAGTCCATACTAAACCGTCTACCACAGTCATACCCCATCAACACTCATATTACAAATTCGCCATAGGCCTTGCCGGTCAGATAGTATAGGTTTAAACAACTACACCCTCAGTTGCTATACGCGTTTCCAATTCGCAACCATTATGGTAACCCCTAGACCCAATCAACTAATCAATCAAAATCGGACTCACTGTCCTTCCCCGTCCAAACTCCATGATCAATGTCCAGACCAATGACTACCACGTACCTAACCGTAACTTCAAGGTCCATCGACATACAATTCCAATCTACAACGTAGCCCATTAACATAACCACACTATACCAAACATCCAGCATCGGGGTCTACCAGCAAGTAACTCCTTATACCCGATAGCACACAAGCTACAACTAGCGGTCGCGTTACCTTTACATCAGACAAGAGTATAGTAACAATGCTTAAAAGTCAAACACACATATATTTATTCGGTACAGTTACTAACGTGTAATCCCCTATGGACTACTACGTTTCCAGCCTCGATCCGAGGTCCAGTAGTAGGAAAACCCTTACCTGAAACTTGGTTATGCCCCTCGATCGAGTCCACGCTCAACGGATCAACCTAAACGAAAACACAAGGGTTTTTAAACGATGATACTAGTAGAAGTCATTTTAATTGGCCCTAAGCAACAACCGTTGACTTACCCGAGGAAAGGAAAACTACCTCCAAATAAGCCTGCCGCGGAACCCGAGAACTTAAACGTCAACTCCTTAATACCTTCAAGGGATGAAAGGTAGGACCAAATCTTATTCCAATATTCAAATTCGAATCGGACGTAGCAACATTAGGAAATTCATCAAAATAATCCTTACCGAAGTCTCACCGTGACCCGAAGTGGAGGAAGGAAGGCTTAGGTGGCTCGGTGAATAGGGAGCTCGGCTTGGCTTGGAGGTGTTCGTCTCGGCTCGCGGCTTGGCTCGGCTTGGCTCACCCTCGGCTCGGCTCGGCTTGGCCTCGGCTCACAGCTCGGCTCACGGCTCGGCTTGTGGCTCAGCTCAACTCGGCTCGCGGCTCGGCTCGCCGCTCCGCTCAACTCGGCTCGACTCGGCTCGCGGCTCGGCTCAACTCGGCTCGCGGCTCGGCTCGTGGCTCGGCTCAACTCGACTCGCGGCTCGGCTTACAGCTTGAAACACGGGTCAGACTGGAAGCGGGTTCTCGGGTCGGGTCGACTTGAAATCGGGCAACCACGAACGACAAACCTTCGGGCGTTCGACGACGGAGACGCGTCGCGGCTTGGCGGAGTCTGACGACTGGCTCTGCTTCAACGCGGCGGAGGGCGACGGATTGACGGCGGACACGGTCGGACGAAGAACGCACGGCGGCGTCCGAGTGCTTTGAACCGAGAGGAGACCCGAAATGGTAGGGAGCCGCGGCAGACGAAAACGATGAAGTTGAAGACGTTGCCGACGCTGGAGACGGAAATGGAGACGGAACGCGACGGAGGAGATGGGGACGGAGGCGACGGAGAGTGTGAGGAAGAGAGATGGTGGGAGGCGGCGCTGAAAGGAAAGAAAAGAAGATGGGTTGCGGCGGCGCAAGGAAGAAGAAAACGAAAATGGATGAAGGGGGGGGGGTGCGACGCAGCTTGGCTTGGCTTGGCTTGGAGGTGTTCGGCTCGGCTTGGCTCGGCTCGCAGCTTGGCTCGGCTTGGCTCACCCTCGGCTCGGCTTGGCTTGGCCTCGGCTTGGCTCACCCTCGGCTCGGCTTGGCTTGGCCTCGGCTCACAGCTCGGCTCGGCTCGGCTTGGCCTCGGATCACGTTTAAGTGTAACTGAAAACAAGAAGTTGAAACTCGCTTTTATAATATCCAAGTCATAAACATTCCTTAAACCGCGATGCATAAACACATTGTTTAAACATGAACGAAAACGTGGTCATAAAAGGTTTAAGTCATGGTAGTTTCCAAGCAATATCAAGAGATAACGTGTATATGTATAAATAAAGCTTGAAAATGAGCCACTCACAATCAATGACTTGATCCCCTGGGATTATATGCTTTTCCCACCTCAATTTGGCCTGAAGCAAAGATTAAGATCTATTAGTTAGCTTCATAAAGCAAGACGACGCAACAATCTTCAAATCACTTCATAAGACCAACTCAAACTATTTTATGTTTTTAAAGTCCTTAAATTCTCAATTTTCCTTCGATTAGACTAGACTTTTCACCTACGAATCCTTAGACTTGAAGCCTAATTACTTAACACAATGAGCGTTCAACTTAGTTCAAGCTTAATGGGTCTTTTATGTAAATACATCAAGCTCAATGGATCATTTATGTGGATTTATATCCATTATATCAACAAGGGACCAGATTTAGATTGAACTATCCCCCAAATGGTTTAATTTAGGCTATTTGGACCCTTAAACTTCAACTTAAATTCTTAACGCCACAAGCACCCCAACTTATGTCGTCATTTAAATCCATACTCTCTTATATCCAATATTCATACCTTAGAAGTTTAGATCTATTTACAATCCCAACATCCATCTAACTGGACAATAACTTAGAAGCATACCCCATCTCATTTAAAACAACCTCAACCATGTTGGTTAATGCTTCCAAGTTCTCGAAATCTTCAACTCCTCATACAAAACAATATGGTTAAAATCATGTTCACGTTAAAACCAGATGGGTATTTAAAAATTTTGAGAAAACCCAATAAATTTATCTAAAACCTTATCGATACCTTGTCAAAATTGCCTTAACAACACATTAACGACTTTCTAATTTTGAAACTAATACCTACAACTATTTTATGTTTTGAAGCTTATAGAAGTAACACCCCAGCGAACTCCAAAGTTAACGAAAAGTCTATTTTCAACCTTTAACCTTCAACTCTAAGAGAAACTCAATGAAGTTATTCCAAAACTTTCCAAAGACTTAACAAAGTACCCATAATTTCAATGGAGAGCACTCTAACTAACTTCTAATCTCAAAATAAGCATCCGACATCATGGGCTATTCAAGAACTTAGCAAAGTAATCTAACTTCAATGAAAAATGCTCTAACCGCGGGACTCAACTATGGAATCCTAGCATCCTTAAACCATGGTTTGCTTAATATTAGCTCCAATAATTAAGGGATTCTAAAGACCCATTCAATAAAGCTTAGAATCTTACCCAAGTCGTGCCAAAAATGCCCAATTTCGAGTTCTTGAATGGTTGTACAGCGGCAAAAATTTCTCTAATAATTAAATTTAGTATCAAAGAGTAATGGGTATTGTGAAAATCGAGTTAAAACTTAATGGATAATGGAAACTCATCAAGAAATCCATTAAAACAAAGAAGATTTACCCAAAAACTTAGATCCAACGATACGGAGTTGAACATAACAAAATTAGAAATGATTTGACTTGCCGAATGACAACGAATGATGGTTAAATAGTGCACAGCTTGGGTAACGATGAAACACAATGAGGAAACTCGAAGAGATTGTGCTGATTCAAACTGACAGCTTCAAAATGCCGTGGTTCAAGGCGGTATGCGGCGTGGGTGGTCATTGTTCGACGACTGGGGTGGTGCAACGACGGTTGGTCGTGTCGGCGTGAAGGAGCAAAGAAGGATGTGGCGGCAGAAGAGATTTCAAAAGGGAGGGGGCCGGTCGGTCTAGGCGGGTGAAGAAGGAGAAAAGAAGAAGAAGAAGAAGAAAAAGAATAAATTATTTATTTATTTATTTTTAAATTAATAATGATGATAGAATGACCAAAATGCACTTCAATTCAAATTAAACCCACTTTTCACCATTCTTCATTCCTTTCAACACCTATACAAAACAAATTAAGCTTTAAAACTCCATTAAAATAGTTCTAAAATTTCCTTATCACATGAATCAATCTTAAAGAGTATAAAAATATTCCAACTTGTTTTTCACCATTTTAAGAGATATTAAATAAATAATTTTTTAAAAAAGAACACAGGATGAAGGCTTACACTTTTGCCCCTTGGCAGAATTATCTAAGGTGCATTAGATGGTACACACATCAAAGTGAATGTAAGTATGAGTGATCGCCGAAGGTATAGGTCTAGAAAAGGTGACATTACCATAAATGTACTTGGTGTGTGTTCGCAAAATGGTGAGTTCATATTTGTCATGCATGGATGGGAAGGGTCTGCATATGATTTGAGAGTACTTAGAGATGCAATGTCACGACCTACTGGTCTAAAAGTCCCAACGGGTAAGATGATGCATTCTCTTCTCCTCATAGTGGTGTTAGACCATATGCTCATTTAATATGGTGTACCCTAATAATTCATTATGGGCACAACATGGGCAGATTACTACTATTTGTGTGATGCTGGTTATCCAAATGCTGAAGGATTCCTCACTCCATACCAAGGTCAACGTTACCATCTAACTGAATGGCATGGAGGAAACCCACCAAAATGCCCAAAAAAGCTATTTAACATAAGGCATTCCTCTGCTAAAAACGTTATTAAAAGAGCATTTGGATCATTGAAAGGTCAGTGGGCCATTCTACGAGGGAGATCCTATTACCCCGTTGACATACAATGTAAAGTAATAATAGCATGTTGCCTCTTACATAACTTGATACATAGAGAAATAAGTTCAGAGGCAACATTTGAGAAGCCACATCTTTGTGAAGGTGATTCAAGCGAGATGAACATTGAGAATATAAATTTTTTGGAAACGACTAATGTCTGGACTGAATGGAGGGATAATTTTGCAAACCAAATGTTTGAGGATTGGAATAATGTATGATTAATATATGTAGTTTAGTTTCCTACATAATTTTGTTGTTTTATCACATGATCTGTACTTGAACTATTTTTTGTGTGTAATTGGAGTCAGAAATACATAGGGGTTTCCTCTAAATGATGAGAACTAAGTTATCGATATGTTAATCTATAGATTTTGTATCCATTGATTTTTATAATATTCATGTGCTAATTTAGATGGCGTCGACAAATTTAAAAGCCACTAAGCATCAGTGGACAACCATTGAGGATGAGACGTTAGTTGAGTGCTTACTACAA

mRNA sequence

ATGTGGATGTTGAAGAGATGGTTGCGATTTTCTTGCATATTGTAGCACACGATATTAAGAATAGGGTAGCCCGACGACATTTTGCAAGGTCAGGTGAAACAATGTCAAGACACTTCAATGTTGTTCTTAACACAGTTCTTAGACTCCATGAAATCCTTCTTAAGCAACCTGATCCAATGGCGTCGACAAATTTAAAAGCCACTAAGCATCAGTGGACAACCATTGAGGATGAGACGTTAGTTGAGTGCTTACTACAA

Coding sequence (CDS)

ATGGTTGCGATTTTCTTGCATATTGTAGCACACGATATTAAGAATAGGGTAGCCCGACGACATTTTGCAAGGTCAGGTGAAACAATGTCAAGACACTTCAATGTTGTTCTTAACACAGTTCTTAGACTCCATGAAATCCTTCTTAAGCAACCTGATCCAATGGCGTCGACAAATTTAAAAGCCACTAAGCATCAGTGGACAACCATTGAGGATGAGACGTTAGTTGAGTGCTTACTACAA

Protein sequence

MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPDPMASTNLKATKHQWTTIEDETLVECLLQ
Homology
BLAST of MELO3C032208 vs. NCBI nr
Match: KAA0033487.1 (uncharacterized protein E6C27_scaffold261G00210 [Cucumis melo var. makuwa])

HSP 1 Score: 132.5 bits (332), Expect = 1.6e-27
Identity = 70/94 (74.47%), Postives = 72/94 (76.60%), Query Frame = 0

Query: 1   MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPD-------- 60
           MV IFLHIVAHD+KNRVARRHFARSGET+SRHFNVVLN VLRLHEILLKQPD        
Sbjct: 19  MVTIFLHIVAHDVKNRVARRHFARSGETVSRHFNVVLNVVLRLHEILLKQPDSVTHSCSH 78

Query: 61  ------PMASTNLKATKHQWTTIEDETLVECLLQ 81
                  MAS N K TKH WTTIEDE LVECLLQ
Sbjct: 79  EKWRWFQMASINSKVTKHWWTTIEDEALVECLLQ 112

BLAST of MELO3C032208 vs. NCBI nr
Match: TYK26842.1 (uncharacterized protein E5676_scaffold260G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 132.5 bits (332), Expect = 1.6e-27
Identity = 70/94 (74.47%), Postives = 72/94 (76.60%), Query Frame = 0

Query: 1   MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPD-------- 60
           MV IFLHIVAHD+KNRVARRHFARSGET+SRHFNVVLN VLRLHEILLKQPD        
Sbjct: 19  MVTIFLHIVAHDVKNRVARRHFARSGETVSRHFNVVLNVVLRLHEILLKQPDSVTHSCSH 78

Query: 61  ------PMASTNLKATKHQWTTIEDETLVECLLQ 81
                  MAS N K TKH WTTIEDE LVECLLQ
Sbjct: 79  EKWRWFQMASINSKVTKHWWTTIEDEALVECLLQ 112

BLAST of MELO3C032208 vs. NCBI nr
Match: TYK07921.1 (hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 120.2 bits (300), Expect = 8.3e-24
Identity = 71/135 (52.59%), Postives = 74/135 (54.81%), Query Frame = 0

Query: 1   MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPDP------- 60
           MV IFLHIVAHD+KNRVARRH ARSGET+SRHFN VLN VLRLHEILLKQPDP       
Sbjct: 30  MVVIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHSCAL 89

Query: 61  ------------------------------------------------MASTNLKATKHQ 81
                                                           MASTN KATKH+
Sbjct: 90  DGTHIKVNVSMSDCPRYRFRNGDITTNVTTTYVMLVIQMLKDSSLHTEMASTNSKATKHR 149

BLAST of MELO3C032208 vs. NCBI nr
Match: KAA0041970.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK17906.1 putative nuclease HARBI1 [Cucumis melo var. makuwa])

HSP 1 Score: 106.7 bits (265), Expect = 9.5e-20
Identity = 52/54 (96.30%), Postives = 53/54 (98.15%), Query Frame = 0

Query: 1  MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPDPM 55
          MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFN VLNTVLRLHEILLKQPDP+
Sbjct: 30 MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNAVLNTVLRLHEILLKQPDPV 83

BLAST of MELO3C032208 vs. NCBI nr
Match: KAA0050107.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa])

HSP 1 Score: 104.0 bits (258), Expect = 6.2e-19
Identity = 51/66 (77.27%), Postives = 58/66 (87.88%), Query Frame = 0

Query: 1  MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPDPMASTNLK 60
          MVAIFLHIVAHD+KNRVARRHFARSGET+SRHFN VLN VLRLHEILLKQPDP+ + +  
Sbjct: 30 MVAIFLHIVAHDVKNRVARRHFARSGETVSRHFNAVLNAVLRLHEILLKQPDPV-THSCS 89

Query: 61 ATKHQW 67
            K++W
Sbjct: 90 HEKYRW 94

BLAST of MELO3C032208 vs. ExPASy TrEMBL
Match: A0A5A7SW62 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold261G00210 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 7.9e-28
Identity = 70/94 (74.47%), Postives = 72/94 (76.60%), Query Frame = 0

Query: 1   MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPD-------- 60
           MV IFLHIVAHD+KNRVARRHFARSGET+SRHFNVVLN VLRLHEILLKQPD        
Sbjct: 19  MVTIFLHIVAHDVKNRVARRHFARSGETVSRHFNVVLNVVLRLHEILLKQPDSVTHSCSH 78

Query: 61  ------PMASTNLKATKHQWTTIEDETLVECLLQ 81
                  MAS N K TKH WTTIEDE LVECLLQ
Sbjct: 79  EKWRWFQMASINSKVTKHWWTTIEDEALVECLLQ 112

BLAST of MELO3C032208 vs. ExPASy TrEMBL
Match: A0A5D3DTL0 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold260G00340 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 7.9e-28
Identity = 70/94 (74.47%), Postives = 72/94 (76.60%), Query Frame = 0

Query: 1   MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPD-------- 60
           MV IFLHIVAHD+KNRVARRHFARSGET+SRHFNVVLN VLRLHEILLKQPD        
Sbjct: 19  MVTIFLHIVAHDVKNRVARRHFARSGETVSRHFNVVLNVVLRLHEILLKQPDSVTHSCSH 78

Query: 61  ------PMASTNLKATKHQWTTIEDETLVECLLQ 81
                  MAS N K TKH WTTIEDE LVECLLQ
Sbjct: 79  EKWRWFQMASINSKVTKHWWTTIEDEALVECLLQ 112

BLAST of MELO3C032208 vs. ExPASy TrEMBL
Match: A0A5D3C7T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00330 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.0e-24
Identity = 71/135 (52.59%), Postives = 74/135 (54.81%), Query Frame = 0

Query: 1   MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPDP------- 60
           MV IFLHIVAHD+KNRVARRH ARSGET+SRHFN VLN VLRLHEILLKQPDP       
Sbjct: 30  MVVIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHSCAL 89

Query: 61  ------------------------------------------------MASTNLKATKHQ 81
                                                           MASTN KATKH+
Sbjct: 90  DGTHIKVNVSMSDCPRYRFRNGDITTNVTTTYVMLVIQMLKDSSLHTEMASTNSKATKHR 149

BLAST of MELO3C032208 vs. ExPASy TrEMBL
Match: A0A5A7TF70 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G001930 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.6e-20
Identity = 52/54 (96.30%), Postives = 53/54 (98.15%), Query Frame = 0

Query: 1  MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPDPM 55
          MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFN VLNTVLRLHEILLKQPDP+
Sbjct: 30 MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNAVLNTVLRLHEILLKQPDPV 83

BLAST of MELO3C032208 vs. ExPASy TrEMBL
Match: A0A5A7U6W3 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001210 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.0e-19
Identity = 51/66 (77.27%), Postives = 58/66 (87.88%), Query Frame = 0

Query: 1  MVAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPDPMASTNLK 60
          MVAIFLHIVAHD+KNRVARRHFARSGET+SRHFN VLN VLRLHEILLKQPDP+ + +  
Sbjct: 30 MVAIFLHIVAHDVKNRVARRHFARSGETVSRHFNAVLNAVLRLHEILLKQPDPV-THSCS 89

Query: 61 ATKHQW 67
            K++W
Sbjct: 90 HEKYRW 94

BLAST of MELO3C032208 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 4.9e-06
Identity = 24/56 (42.86%), Postives = 36/56 (64.29%), Query Frame = 0

Query: 2   VAIFLHIVAHDIKNRVARRHFARSGETMSRHFNVVLNTVLRLHEILLKQPDPMAST 58
           +AIFL I+ H+++ R  +  F  SGET+SRHFN VLN V+ + +    QP+  + T
Sbjct: 78  LAIFLFIIGHNLRTRAVQELFCYSGETISRHFNNVLNAVIAISKDFF-QPNSNSDT 132

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0033487.11.6e-2774.47uncharacterized protein E6C27_scaffold261G00210 [Cucumis melo var. makuwa][more]
TYK26842.11.6e-2774.47uncharacterized protein E5676_scaffold260G00340 [Cucumis melo var. makuwa][more]
TYK07921.18.3e-2452.59hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa][more]
KAA0041970.19.5e-2096.30putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK17906.1 putative nucleas... [more]
KAA0050107.16.2e-1977.27putative nuclease HARBI1 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SW627.9e-2874.47Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5D3DTL07.9e-2874.47Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5D3C7T44.0e-2452.59Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TF704.6e-2096.30Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A5A7U6W33.0e-1977.27Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... [more]
Match NameE-valueIdentityDescription
AT5G41980.14.9e-0642.86CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR22930:SF216OS11G0577650 PROTEINcoord: 1..59
NoneNo IPR availablePANTHERPTHR22930UNCHARACTERIZEDcoord: 1..59

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032208.1MELO3C032208.1mRNA