MELO3C032206 (gene) Melon (DHL92) v4

Overview


Name	MELO3C032206
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Retrotransposon protein
Location	chr06: 26761538 .. 26762573 (+)
RNA-Seq Expression	MELO3C032206
Synteny	MELO3C032206

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTAGCATGACAAGTTCATCGAGACTACCTAAACATACTTGGACTAAAGAGGAAGAGGCAGGCCTCGTGGAGTTGGTCAATGCTGGTAGGTGGAGGTCCGACAATGGAACCTTTCGCCCTGGGTACTTAAATCAGCTAGCGAGAATGATGGCCTTCAAGATCCCAGGTTGTAATATCCATGCTTCAACCATCGATAGTCGAATCAAATTGATGAAGAAAATGTTCCATGCACTTGCGGAGATGCGTGGCCCAAACTGTAGTGGTTTTGGGTGGAATGATGAAAAAAAAATGCATCGTCGCTGAAAAAGAAGTCTTTGACGATTGGGTAAAGGTGCGTTACTAGTCATTTGAACACTTGTACTATTATTTCAATACATGAACTAATAGTTTATTATTGCACTTATACAGAGTCATCCGGCGGCGAAAGGCCTCCTTAATAAGTCGTTTGTCCACTATGACGAACTGTCGTACGTGTTTGGCAAAGATCGTGCAACAGGAGGCCGGGCTAAGAGTTTTGCAGACATTGGGTCAAACCATCCTGCTGGGTATGACGCATTTCCTGCTGACACTACGCCATATACGGACTTCCTGCCAATGTATAGTCCAGGATTGAACATGTCGCCTGATGATTTGATGGAAACAAGAACCGCTAGGGTCAGTGAACGTAGGAATGTTTCAAGCGGGTCTAAGCGGAAACGTCCAGGACATACCACAGATAGTGGGGACATAGTTCGTACTGCCATTGAGTACGAAAATGAACAACTTCATCGCATTGCTGAATGGCCTATCCTACAACATCAAGACGCTAGCCAAACACGTCAAGAGATTGTTCGACAATTGGAGGTCATCCCTGAGCTCACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTAACGTCGATGACATGAAAGCTTTCCTTGAAGTTTCGGACAATATGAAGTACCCGTACTGCAGCATCATTCTTCAAGAAAACCGATGACTAGTTTGTTTGTTGTATTTGTATTAATGAAACTTTTCTTACTTGGAC

mRNA sequence

TTCTAGCATGACAAGTTCATCGAGACTACCTAAACATACTTGGACTAAAGAGGAAGAGGCAGGCCTCGTGGAGTTGGTCAATGCTGGTAGGTGGAGGTCCGACAATGGAACCTTTCGCCCTGGGTACTTAAATCAGCTAGCGAGAATGATGGCCTTCAAGATCCCAGGTTGTAATATCCATGCTTCAACCATCGATAGTCGAATCAAATTGATGAAGAAAATGTTCCATGCACTTGCGGAGATGCGTGGCCCAAACTGTAGTGGTTTTGGGTGGAATGATGAAAAAAAAATGCATCGTCGCTGAAAAAGAAGTCTTTGACGATTGGGTAAAGAGTCATCCGGCGGCGAAAGGCCTCCTTAATAAGTCGTTTGTCCACTATGACGAACTGTCGTACGTGTTTGGCAAAGATCGTGCAACAGGAGGCCGGGCTAAGAGTTTTGCAGACATTGGGTCAAACCATCCTGCTGGGTATGACGCATTTCCTGCTGACACTACGCCATATACGGACTTCCTGCCAATGTATAGTCCAGGATTGAACATGTCGCCTGATGATTTGATGGAAACAAGAACCGCTAGGGTCAGTGAACGTAGGAATGTTTCAAGCGGGTCTAAGCGGAAACGTCCAGGACATACCACAGATAGTGGGGACATAGTTCGTACTGCCATTGAGTACGAAAATGAACAACTTCATCGCATTGCTGAATGGCCTATCCTACAACATCAAGACGCTAGCCAAACACGTCAAGAGATTGTTCGACAATTGGAGGTCATCCCTGAGCTCACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTAACGTCGATGACATGAAAGCTTTCCTTGAAGTTTCGGACAATATGAAGTACCCGTACTGCAGCATCATTCTTCAAGAAAACCGATGACTAGTTTGTTTGTTGTATTTGTATTAATGAAACTTTTCTTACTTGGAC

Coding sequence (CDS)

ATGCACTTGCGGAGATGCGTGGCCCAAACTGTAGTGGTTTTGGGTGGAATGATGAAAAAAAAATGCATCGTCGCTGAAAAAGAAGTCTTTGACGATTGGGTAAAGAGTCATCCGGCGGCGAAAGGCCTCCTTAATAAGTCGTTTGTCCACTATGACGAACTGTCGTACGTGTTTGGCAAAGATCGTGCAACAGGAGGCCGGGCTAAGAGTTTTGCAGACATTGGGTCAAACCATCCTGCTGGGTATGACGCATTTCCTGCTGACACTACGCCATATACGGACTTCCTGCCAATGTATAGTCCAGGATTGAACATGTCGCCTGATGATTTGATGGAAACAAGAACCGCTAGGGTCAGTGAACGTAGGAATGTTTCAAGCGGGTCTAAGCGGAAACGTCCAGGACATACCACAGATAGTGGGGACATAGTTCGTACTGCCATTGAGTACGAAAATGAACAACTTCATCGCATTGCTGAATGGCCTATCCTACAACATCAAGACGCTAGCCAAACACGTCAAGAGATTGTTCGACAATTGGAGGTCATCCCTGAGCTCACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTAACGTCGATGACATGAAAGCTTTCCTTGAAGTTTCGGACAATATGAAGTACCCGTACTGCAGCATCATTCTTCAAGAAAACCGATGA

Protein sequence

MHLRRCVAQTVVVLGGMMKKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAKSFADIGSNHPAGYDAFPADTTPYTDFLPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHTTDSGDIVRTAIEYENEQLHRIAEWPILQHQDASQTRQEIVRQLEVIPELTLMDRCRLMRILMRNVDDMKAFLEVSDNMKYPYCSIILQENR

Homology

[Close]

BLAST of MELO3C032206 vs. NCBI nr
Match: KAA0048280.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 400.6 bits (1028), Expect = 9.1e-108
Identity = 199/216 (92.13%), Postives = 205/216 (94.91%), Query Frame = 0


Query: 12  VVLGGMMKKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAKSF 71
           VVLGGMMKKKCI+AEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRA+SF
Sbjct: 58  VVLGGMMKKKCIIAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESF 117

Query: 72  ADIGSNHPAGYDAFPADTTPYTDFLPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRK 131
           ADIGSN PAGYDAF AD    TDFLPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRK
Sbjct: 118 ADIGSNDPAGYDAFAADDVSDTDFLPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRK 177

Query: 132 RPGHTTDSGDIVRTAIEYENEQLHRIAEWPILQHQDASQTRQEIVRQLEVIPELTLMDRC 191
           R GH TDSGDIVRTA+EY NEQLHRIAEWPILQ QDA++TRQEIVRQLEVIPELTLMDRC
Sbjct: 178 RSGHATDSGDIVRTAMEYGNEQLHRIAEWPILQRQDATETRQEIVRQLEVIPELTLMDRC 237

Query: 192 RLMRILMRNVDDMKAFLEVSDNMKYPYCSIILQENR 228
           RLMRI+MRNVDDMKAFLEV DNMKYPYCSIILQENR
Sbjct: 238 RLMRIIMRNVDDMKAFLEVPDNMKYPYCSIILQENR 273

[Close]

BLAST of MELO3C032206 vs. NCBI nr
Match: KAA0068123.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 389.0 bits (998), Expect = 2.7e-104
Identity = 197/222 (88.74%), Postives = 203/222 (91.44%), Query Frame = 0


Query: 6   CVAQTVVVLGGMMKKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATG 65
           CV QTV+VLGGMMKKKCI+AEKEVFDDW  SHPAAKGLLNKSFVHYDELSYVFGKDRATG
Sbjct: 40  CVTQTVMVLGGMMKKKCIIAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATG 99

Query: 66  GRAKSFADIGSNHPAGYDAFPADTTPYTDFLPMYSPGLNMSPDDLMETRTARVSERRNVS 125
           GRA+SFADIGSN PAGYDAF AD    TDF P+YS GLNMS DDLME RTARVSERRNVS
Sbjct: 100 GRAESFADIGSNDPAGYDAFAADAVSDTDFPPIYSSGLNMSRDDLMEIRTARVSERRNVS 159

Query: 126 SGSKRKRPGHTTDSGDIVRTAIEYENEQLHRIAEWPILQHQDASQTRQEIVRQLEVIPEL 185
           SGSK KRPGH TDSGDIVRTAIEY NEQLHRIAEWPILQ QDA+QTRQEIVRQLE IPEL
Sbjct: 160 SGSKWKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPEL 219

Query: 186 TLMDRCRLMRILMRNVDDMKAFLEVSDNMKYPYCSIILQENR 228
           TLMDRCRLMRI+MRNVDDMKAFLEV DNMKYPYCSIILQENR
Sbjct: 220 TLMDRCRLMRIIMRNVDDMKAFLEVPDNMKYPYCSIILQENR 259

[Close]

BLAST of MELO3C032206 vs. NCBI nr
Match: KAA0046363.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 386.3 bits (991), Expect = 1.8e-103
Identity = 195/224 (87.05%), Postives = 202/224 (90.18%), Query Frame = 0


Query: 4   RRCVAQTVVVLGGMMKKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRA 63
           R    + +VVLGGMMKKKCIV EK+VFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRA
Sbjct: 50  RMMAFKILVVLGGMMKKKCIVTEKQVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRA 109

Query: 64  TGGRAKSFADIGSNHPAGYDAFPADTTPYTDFLPMYSPGLNMSPDDLMETRTARVSERRN 123
           TGGR +SFADIGSN PA YDAF AD    T+F PMYSPGLNMSPDDLMETRTARVSERRN
Sbjct: 110 TGGRVESFADIGSNDPARYDAFAADAAADTNFSPMYSPGLNMSPDDLMETRTARVSERRN 169

Query: 124 VSSGSKRKRPGHTTDSGDIVRTAIEYENEQLHRIAEWPILQHQDASQTRQEIVRQLEVIP 183
           VSS SKRKR GH TDSGDIVRTAIEY NEQLHRIAEWPILQ QDA+QTRQEIVRQLE IP
Sbjct: 170 VSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIP 229

Query: 184 ELTLMDRCRLMRILMRNVDDMKAFLEVSDNMKYPYCSIILQENR 228
           ELTLMDRCRLMRILMRNVDD+KAFLEV DNMKYPYCSIILQENR
Sbjct: 230 ELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKYPYCSIILQENR 273

[Close]

BLAST of MELO3C032206 vs. NCBI nr
Match: KAA0050782.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 384.4 bits (986), Expect = 6.7e-103
Identity = 191/209 (91.39%), Postives = 197/209 (94.26%), Query Frame = 0


Query: 19  KKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAKSFADIGSNH 78
           +KKCI+AEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRA+SFADIGSN 
Sbjct: 46  EKKCIIAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSND 105

Query: 79  PAGYDAFPADTTPYTDFLPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHTTD 138
           PAGYDAF ADT   TDF PMYSPGLNMSPDDLMETRTARVSERRNVSSGSK KRPGH TD
Sbjct: 106 PAGYDAFAADTVLDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKWKRPGHATD 165

Query: 139 SGDIVRTAIEYENEQLHRIAEWPILQHQDASQTRQEIVRQLEVIPELTLMDRCRLMRILM 198
           SGDIVRTAIEY NEQLHRIAEWPILQ QDA+QTRQEIVRQLE IPELTLMDRCRLMRI+M
Sbjct: 166 SGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRIIM 225

Query: 199 RNVDDMKAFLEVSDNMKYPYCSIILQENR 228
           RNVDDMKAFL+V DNMKYPYCSIILQENR
Sbjct: 226 RNVDDMKAFLKVPDNMKYPYCSIILQENR 254

[Close]

BLAST of MELO3C032206 vs. NCBI nr
Match: KAA0065737.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 377.5 bits (968), Expect = 8.2e-101
Identity = 190/209 (90.91%), Postives = 194/209 (92.82%), Query Frame = 0


Query: 19  KKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAKSFADIGSNH 78
           +KKCIVAEKEVFDDW  SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRA+SFADIGSN 
Sbjct: 92  EKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSND 151

Query: 79  PAGYDAFPADTTPYTDFLPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHTTD 138
           P GYDAF AD  P TDF PMYSPGLNMSPDDLMETRTARVSERRNVSS SKRKRPGH TD
Sbjct: 152 PPGYDAFAADAVPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSESKRKRPGHATD 211

Query: 139 SGDIVRTAIEYENEQLHRIAEWPILQHQDASQTRQEIVRQLEVIPELTLMDRCRLMRILM 198
           SGDIVRTAIEY NEQLHRIAEWPILQ QDA+QTRQ+IVRQLE IPELTLMDRCRLMRILM
Sbjct: 212 SGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQDIVRQLEAIPELTLMDRCRLMRILM 271

Query: 199 RNVDDMKAFLEVSDNMKYPYCSIILQENR 228
           RNVDDMKAFLEV DNMKYPYCSIILQENR
Sbjct: 272 RNVDDMKAFLEVPDNMKYPYCSIILQENR 298

[Close]

BLAST of MELO3C032206 vs. ExPASy TrEMBL
Match: A0A5A7TYQ6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G002060 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 4.4e-108
Identity = 199/216 (92.13%), Postives = 205/216 (94.91%), Query Frame = 0


Query: 12  VVLGGMMKKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAKSF 71
           VVLGGMMKKKCI+AEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRA+SF
Sbjct: 58  VVLGGMMKKKCIIAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESF 117

Query: 72  ADIGSNHPAGYDAFPADTTPYTDFLPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRK 131
           ADIGSN PAGYDAF AD    TDFLPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRK
Sbjct: 118 ADIGSNDPAGYDAFAADDVSDTDFLPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRK 177

Query: 132 RPGHTTDSGDIVRTAIEYENEQLHRIAEWPILQHQDASQTRQEIVRQLEVIPELTLMDRC 191
           R GH TDSGDIVRTA+EY NEQLHRIAEWPILQ QDA++TRQEIVRQLEVIPELTLMDRC
Sbjct: 178 RSGHATDSGDIVRTAMEYGNEQLHRIAEWPILQRQDATETRQEIVRQLEVIPELTLMDRC 237

Query: 192 RLMRILMRNVDDMKAFLEVSDNMKYPYCSIILQENR 228
           RLMRI+MRNVDDMKAFLEV DNMKYPYCSIILQENR
Sbjct: 238 RLMRIIMRNVDDMKAFLEVPDNMKYPYCSIILQENR 273

[Close]

BLAST of MELO3C032206 vs. ExPASy TrEMBL
Match: A0A5A7VJ40 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G00840 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.3e-104
Identity = 197/222 (88.74%), Postives = 203/222 (91.44%), Query Frame = 0


Query: 6   CVAQTVVVLGGMMKKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATG 65
           CV QTV+VLGGMMKKKCI+AEKEVFDDW  SHPAAKGLLNKSFVHYDELSYVFGKDRATG
Sbjct: 40  CVTQTVMVLGGMMKKKCIIAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATG 99

Query: 66  GRAKSFADIGSNHPAGYDAFPADTTPYTDFLPMYSPGLNMSPDDLMETRTARVSERRNVS 125
           GRA+SFADIGSN PAGYDAF AD    TDF P+YS GLNMS DDLME RTARVSERRNVS
Sbjct: 100 GRAESFADIGSNDPAGYDAFAADAVSDTDFPPIYSSGLNMSRDDLMEIRTARVSERRNVS 159

Query: 126 SGSKRKRPGHTTDSGDIVRTAIEYENEQLHRIAEWPILQHQDASQTRQEIVRQLEVIPEL 185
           SGSK KRPGH TDSGDIVRTAIEY NEQLHRIAEWPILQ QDA+QTRQEIVRQLE IPEL
Sbjct: 160 SGSKWKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPEL 219

Query: 186 TLMDRCRLMRILMRNVDDMKAFLEVSDNMKYPYCSIILQENR 228
           TLMDRCRLMRI+MRNVDDMKAFLEV DNMKYPYCSIILQENR
Sbjct: 220 TLMDRCRLMRIIMRNVDDMKAFLEVPDNMKYPYCSIILQENR 259

[Close]

BLAST of MELO3C032206 vs. ExPASy TrEMBL
Match: A0A5A7TS39 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G00750 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 8.6e-104
Identity = 195/224 (87.05%), Postives = 202/224 (90.18%), Query Frame = 0


Query: 4   RRCVAQTVVVLGGMMKKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRA 63
           R    + +VVLGGMMKKKCIV EK+VFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRA
Sbjct: 50  RMMAFKILVVLGGMMKKKCIVTEKQVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRA 109

Query: 64  TGGRAKSFADIGSNHPAGYDAFPADTTPYTDFLPMYSPGLNMSPDDLMETRTARVSERRN 123
           TGGR +SFADIGSN PA YDAF AD    T+F PMYSPGLNMSPDDLMETRTARVSERRN
Sbjct: 110 TGGRVESFADIGSNDPARYDAFAADAAADTNFSPMYSPGLNMSPDDLMETRTARVSERRN 169

Query: 124 VSSGSKRKRPGHTTDSGDIVRTAIEYENEQLHRIAEWPILQHQDASQTRQEIVRQLEVIP 183
           VSS SKRKR GH TDSGDIVRTAIEY NEQLHRIAEWPILQ QDA+QTRQEIVRQLE IP
Sbjct: 170 VSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIP 229

Query: 184 ELTLMDRCRLMRILMRNVDDMKAFLEVSDNMKYPYCSIILQENR 228
           ELTLMDRCRLMRILMRNVDD+KAFLEV DNMKYPYCSIILQENR
Sbjct: 230 ELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKYPYCSIILQENR 273

[Close]

BLAST of MELO3C032206 vs. ExPASy TrEMBL
Match: A0A5A7U4M2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold404G00330 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.3e-103
Identity = 191/209 (91.39%), Postives = 197/209 (94.26%), Query Frame = 0


Query: 19  KKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAKSFADIGSNH 78
           +KKCI+AEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRA+SFADIGSN 
Sbjct: 46  EKKCIIAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSND 105

Query: 79  PAGYDAFPADTTPYTDFLPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHTTD 138
           PAGYDAF ADT   TDF PMYSPGLNMSPDDLMETRTARVSERRNVSSGSK KRPGH TD
Sbjct: 106 PAGYDAFAADTVLDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKWKRPGHATD 165

Query: 139 SGDIVRTAIEYENEQLHRIAEWPILQHQDASQTRQEIVRQLEVIPELTLMDRCRLMRILM 198
           SGDIVRTAIEY NEQLHRIAEWPILQ QDA+QTRQEIVRQLE IPELTLMDRCRLMRI+M
Sbjct: 166 SGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRIIM 225

Query: 199 RNVDDMKAFLEVSDNMKYPYCSIILQENR 228
           RNVDDMKAFL+V DNMKYPYCSIILQENR
Sbjct: 226 RNVDDMKAFLKVPDNMKYPYCSIILQENR 254

[Close]

BLAST of MELO3C032206 vs. ExPASy TrEMBL
Match: A0A5A7SWD8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold515G00010 PE=3 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 4.0e-101
Identity = 190/209 (90.91%), Postives = 195/209 (93.30%), Query Frame = 0


Query: 19  KKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAKSFADIGSNH 78
           +KKCIVAEKEVFDDW  SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRA+SFADIGSN+
Sbjct: 438 EKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNN 497

Query: 79  PAGYDAFPADTTPYTDFLPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHTTD 138
           P GYDAF AD  P TDF PMYS GLNMSPDDLMETRTARVSERRNVSSGSKRKRPGH TD
Sbjct: 498 PPGYDAFAADAVPDTDFSPMYSLGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATD 557

Query: 139 SGDIVRTAIEYENEQLHRIAEWPILQHQDASQTRQEIVRQLEVIPELTLMDRCRLMRILM 198
           SGDIVRTAIEY NEQLHRIAEWPILQ QDA+QTRQEIV+QLE IPELTLMDRCRLMRILM
Sbjct: 558 SGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVQQLEAIPELTLMDRCRLMRILM 617

Query: 199 RNVDDMKAFLEVSDNMKYPYCSIILQENR 228
           RNVDDMKAFLEV DNMKYPYCSIILQENR
Sbjct: 618 RNVDDMKAFLEVPDNMKYPYCSIILQENR 644

The following BLAST results are available for this feature:

BLAST of MELO3C032206 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048280.1	9.1e-108	92.13	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0068123.1	2.7e-104	88.74	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0046363.1	1.8e-103	87.05	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0050782.1	6.7e-103	91.39	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0065737.1	8.2e-101	90.91	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C032206 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C032206 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TYQ6	4.4e-108	92.13	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7VJ40	1.3e-104	88.74	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TS39	8.6e-104	87.05	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7U4M2	3.3e-103	91.39	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7SWD8	4.0e-101	90.91	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO3C032206 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..138
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 20..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032206.1	MELO3C032206.1	mRNA