MELO3C031841 (gene) Melon (DHL92) v4

Overview


Name	MELO3C031841
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr11: 27368901 .. 27369269 (+)
RNA-Seq Expression	MELO3C031841
Synteny	MELO3C031841

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAGCGACAATCACCGCCGCCGTAGACCGGCCCAAAGACCCGACGGCCACCGTATCCTCAACCAGAATCGCCTTCCCTTCCAAATCCCCAAAAGGATTCTCAGCGATTACATTACACGCGCCACCAACAGACCCAGATCTGCCCCCAGCAGTAGCCGCAATACACTGAATAGAGCGACTGGGAATCGAACGGCTGGAAGAAGATCCACCACAAGCCATCCAGAGAGACCGGCCGCCAAGATCGACAGCGAGATGGACGGGCTTAATAGGAGAACCATGGAAAACAGTGGCCAAATACTGATTGGTGAGGGAATCTTTAGTGAGGGGGATGACGAGAGAGAAGGTTTGGCCATGGAAGAGGGTTAA

mRNA sequence

ATGAAGAGCGACAATCACCGCCGCCGTAGACCGGCCCAAAGACCCGACGGCCACCGTATCCTCAACCAGAATCGCCTTCCCTTCCAAATCCCCAAAAGGATTCTCAGCGATTACATTACACGCGCCACTAGCCGCAATACACTGAATAGAGCGACTGGGAATCGAACGGCTGGAAGAAGATCCACCACAAGCCATCCAGAGAGACCGGCCGCCAAGATCGACAGCGAGATGGACGGGCTTAATAGGAGAACCATGGAAAACAGTGGCCAAATACTGATTGGTGAGGGAATCTTTAGTGAGGGGGATGACGAGAGAGAAGGTTTGGCCATGGAAGAGGGTTAA

Coding sequence (CDS)

ATGAAGAGCGACAATCACCGCCGCCGTAGACCGGCCCAAAGACCCGACGGCCACCGTATCCTCAACCAGAATCGCCTTCCCTTCCAAATCCCCAAAAGGATTCTCAGCGATTACATTACACGCGCCACTAGCCGCAATACACTGAATAGAGCGACTGGGAATCGAACGGCTGGAAGAAGATCCACCACAAGCCATCCAGAGAGACCGGCCGCCAAGATCGACAGCGAGATGGACGGGCTTAATAGGAGAACCATGGAAAACAGTGGCCAAATACTGATTGGTGAGGGAATCTTTAGTGAGGGGGATGACGAGAGAGAAGGTTTGGCCATGGAAGAGGGTTAA

Protein sequence

MKSDNHRRRRPAQRPDGHRILNQNRLPFQIPKRILSDYITRATSRNTLNRATGNRTAGRRSTTSHPERPAAKIDSEMDGLNRRTMENSGQILIGEGIFSEGDDEREGLAMEEG

Homology

[Close]

BLAST of MELO3C031841 vs. ExPASy TrEMBL
Match: A0A0A0KFQ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G237605 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.3e-44
Identity = 103/122 (84.43%), Postives = 104/122 (85.25%), Query Frame = 0


Query: 1   MKSDNHRRRRPAQRPDGHRILNQNRLPFQIPKRILSDYITRAT---------SRNTLNRA 60
           MKSDNHR RRP QRPDGHRILNQNRLPFQIPK I SDYITRAT         SRNTLNRA
Sbjct: 1   MKSDNHRCRRPVQRPDGHRILNQNRLPFQIPKGIPSDYITRATNRPRSTPTSSRNTLNRA 60

Query: 61  TGNRTAGRRSTTSHPERPAAKIDSEMDGLNRRTMENSGQILIGEGIFSEGDDEREGLAME 114
            GNRTAGRRSTTSHPER AAKI+ EMDGLNRR MENSG ILIGEGIFSEGDDEREGLAME
Sbjct: 61  AGNRTAGRRSTTSHPERLAAKINGEMDGLNRRAMENSGYILIGEGIFSEGDDEREGLAME 120

The following BLAST results are available for this feature:

BLAST of MELO3C031841 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C031841 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C031841 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFQ4	1.3e-44	84.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G237605 PE=4 SV=1	[more]

BLAST of MELO3C031841 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031841.1	MELO3C031841.1	mRNA