MELO3C031829 (gene) Melon (DHL92) v4

Overview


Name	MELO3C031829
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	cell wall protein DAN4-like
Location	chr06: 21985397 .. 21985970 (+)
RNA-Seq Expression	MELO3C031829
Synteny	MELO3C031829

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGATCCCTTCTTTCCATCTTCTTTTTCTTCAATATCATCTCTTACATTAATTTTCACAATGGCTTATCAATCTCTTGCTTTCCTGACTCTTATCATTGTTGCCATCACCGGTGTTGTTGCCCAGGCTCCTTCTACCTCCCCTACCTCCACTCCAGCTACCATGACCTCCTCATTTGATTCCTCTACCTCGTCTTCATCTTCACTTGATTCAACTACCACCCCCACCACCACCACCACCTCCTCAACCGATGATTCATCAATCTCAATAGCTCCGGCATTCTCACCTGATTCGTCTGCTCAATCACCAACGACCGCGACATCTCCGACCGGTTCTACTTCTGCCGAGACTTCTCGCTTGTTTTCAAATGGTTTTTTTGGCTGATGGATTTATGGAGAGGAGATTCAAATATCAACTTTTGGTAGAGAACAATATTATTTTAATCCTTTGAGCTATGCTCCTTGAGGCAATGTCATCATCGAGTCATAATTTTACTTTTCACTTTTATTAAGTTTTATTCCATTGTAATCAATTTTCATTCCAATGTAATCACATACATATTATACACAAATTT

mRNA sequence

ATTGATCCCTTCTTTCCATCTTCTTTTTCTTCAATATCATCTCTTACATTAATTTTCACAATGGCTTATCAATCTCTTGCTTTCCTGACTCTTATCATTGTTGCCATCACCGGTGTTGTTGCCCAGGCTCCTTCTACCTCCCCTACCTCCACTCCAGCTACCATGACCTCCTCATTTGATTCCTCTACCTCGTCTTCATCTTCACTTGATTCAACTACCACCCCCACCACCACCACCACCTCCTCAACCGATGATTCATCAATCTCAATAGCTCCGGCATTCTCACCTGATTCGTCTGCTCAATCACCAACGACCGCGACATCTCCGACCGGTTCTACTTCTGCCGAGACTTCTCGCTTGTTTTCAAATGGTTTTTTTGGCTGATGGATTTATGGAGAGGAGATTCAAATATCAACTTTTGGTAGAGAACAATATTATTTTAATCCTTTGAGCTATGCTCCTTGAGGCAATGTCATCATCGAGTCATAATTTTACTTTTCACTTTTATTAAGTTTTATTCCATTGTAATCAATTTTCATTCCAATGTAATCACATACATATTATACACAAATTT

Coding sequence (CDS)

ATGGCTTATCAATCTCTTGCTTTCCTGACTCTTATCATTGTTGCCATCACCGGTGTTGTTGCCCAGGCTCCTTCTACCTCCCCTACCTCCACTCCAGCTACCATGACCTCCTCATTTGATTCCTCTACCTCGTCTTCATCTTCACTTGATTCAACTACCACCCCCACCACCACCACCACCTCCTCAACCGATGATTCATCAATCTCAATAGCTCCGGCATTCTCACCTGATTCGTCTGCTCAATCACCAACGACCGCGACATCTCCGACCGGTTCTACTTCTGCCGAGACTTCTCGCTTGTTTTCAAATGGTTTTTTTGGCTGA

Protein sequence

MAYQSLAFLTLIIVAITGVVAQAPSTSPTSTPATMTSSFDSSTSSSSSLDSTTTPTTTTTSSTDDSSISIAPAFSPDSSAQSPTTATSPTGSTSAETSRLFSNGFFG

Homology

[Close]

BLAST of MELO3C031829 vs. NCBI nr
Match: XP_008450206.1 (PREDICTED: cell wall protein DAN4-like [Cucumis melo])

HSP 1 Score: 165.2 bits (417), Expect = 3.0e-37
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAYQSLAFLTLIIVAITGVVAQAPSTSPTSTPATMTSSFDSSTSSSSSLDSTTTPTTTTT 60
           MAYQSLAFLTLIIVAITGVVAQAPSTSPTSTPATMTSSFDSSTSSSSSLDSTTTPTTTTT
Sbjct: 1   MAYQSLAFLTLIIVAITGVVAQAPSTSPTSTPATMTSSFDSSTSSSSSLDSTTTPTTTTT 60

Query: 61  SSTDDSSISIAPAFSPDSSAQSPTTATSPTGSTSAETSRLFSNGF 106
           SSTDDSSISIAPAFSPDSSAQSPTTATSPTGSTSAETSRLFSNGF
Sbjct: 61  SSTDDSSISIAPAFSPDSSAQSPTTATSPTGSTSAETSRLFSNGF 105

[Close]

BLAST of MELO3C031829 vs. NCBI nr
Match: KAA0056285.1 (cell wall protein DAN4-like [Cucumis melo var. makuwa] >TYK05215.1 cell wall protein DAN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 138.3 bits (347), Expect = 4.0e-29
Identity = 91/107 (85.05%), Postives = 96/107 (89.72%), Query Frame = 0


Query: 1   MAYQSLAFLTLIIVAITGVVAQAPSTSPTSTPATMTSSFDSSTSSSSSLDSTTTPTTTTT 60
           MAYQSLA L LI+VA+TG VAQAPSTSPTS+P TMTSS DSSTSSSSSLDSTTT TTTTT
Sbjct: 1   MAYQSLALLALIVVAVTGAVAQAPSTSPTSSPTTMTSSVDSSTSSSSSLDSTTT-TTTTT 60

Query: 61  SSTDDSSISIAPAFSPDSSAQSPTTATSPTGSTSAETSRLFSNGFFG 108
           SS D SSIS+APAFSPDSSAQSPTTATSPTGS S ETSR F+NGFFG
Sbjct: 61  SSADASSISVAPAFSPDSSAQSPTTATSPTGSPSGETSRFFTNGFFG 106

[Close]

BLAST of MELO3C031829 vs. NCBI nr
Match: KAA0056279.1 (cell wall protein DAN4-like [Cucumis melo var. makuwa] >TYK05220.1 cell wall protein DAN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 131.0 bits (328), Expect = 6.3e-27
Identity = 90/107 (84.11%), Postives = 94/107 (87.85%), Query Frame = 0


Query: 1   MAYQSLAFLTLIIVAITGVVAQAPSTSPTSTPATMTSSFDSSTSSSSSLDSTTTPTTTTT 60
           MAYQSLAFL LIIVA+TG VAQAP+TSPTSTPATMT    SS SSSSSLDSTT P TTT 
Sbjct: 1   MAYQSLAFLALIIVAVTGAVAQAPATSPTSTPATMT----SSASSSSSLDSTTIP-TTTI 60

Query: 61  SSTDDSSISIAPAFSPDSSAQSPTTATSPTGSTSAETSRLFSNGFFG 108
           SS D SSIS+APAFSPDSSAQSPTTATSPTGS SAETSRLF+NGFFG
Sbjct: 61  SSADASSISVAPAFSPDSSAQSPTTATSPTGSPSAETSRLFTNGFFG 102

[Close]

BLAST of MELO3C031829 vs. NCBI nr
Match: XP_031737565.1 (putative protein TPRXL [Cucumis sativus] >KAE8650787.1 hypothetical protein Csa_017464 [Cucumis sativus])

HSP 1 Score: 109.8 bits (273), Expect = 1.5e-20
Identity = 87/118 (73.73%), Postives = 94/118 (79.66%), Query Frame = 0


Query: 1   MAYQSLAFLTLIIVAITGVVAQAPSTS---PT--STPATMTSSFDSST-SSSSSLDSTTT 60
           MAYQSLAFL LIIVA+TGVVAQ P++S   PT  STPA  TSSFDSST SSSSSLDSTTT
Sbjct: 1   MAYQSLAFLALIIVAVTGVVAQGPTSSTPAPTTSSTPAPTTSSFDSSTPSSSSSLDSTTT 60

Query: 61  PTTTTTSST-----DDSSISIAPAFSPDSSAQSPTTATSPTGSTSAETSRLFSNGFFG 108
            TTTTTSS+     D  SIS+AP  +PDS AQSPTTA SPTGS SAETSR F+NGFFG
Sbjct: 61  TTTTTTSSSSGSSADSPSISVAPGLAPDSYAQSPTTAASPTGS-SAETSRFFTNGFFG 117

[Close]

BLAST of MELO3C031829 vs. NCBI nr
Match: KAA0056284.1 (cell wall protein DAN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 108.2 bits (269), Expect = 4.4e-20
Identity = 70/73 (95.89%), Postives = 70/73 (95.89%), Query Frame = 0


Query: 35  MTSSFDSSTSSSSSLDSTTTPTTTTTSSTDDSSISIAPAFSPDSSAQSPTTATSPTGSTS 94
           MTSSFDSSTSSSSSLDSTTTPTTTTTSS DDSSISIAPAFSPDSSAQSPTTATSPT S S
Sbjct: 1   MTSSFDSSTSSSSSLDSTTTPTTTTTSSIDDSSISIAPAFSPDSSAQSPTTATSPTDSAS 60

Query: 95  AETSRLFSNGFFG 108
           AETSRLFSNGFFG
Sbjct: 61  AETSRLFSNGFFG 73

[Close]

BLAST of MELO3C031829 vs. ExPASy TrEMBL
Match: A0A1S3BPQ2 (cell wall protein DAN4-like OS=Cucumis melo OX=3656 GN=LOC103491867 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.5e-37
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAYQSLAFLTLIIVAITGVVAQAPSTSPTSTPATMTSSFDSSTSSSSSLDSTTTPTTTTT 60
           MAYQSLAFLTLIIVAITGVVAQAPSTSPTSTPATMTSSFDSSTSSSSSLDSTTTPTTTTT
Sbjct: 1   MAYQSLAFLTLIIVAITGVVAQAPSTSPTSTPATMTSSFDSSTSSSSSLDSTTTPTTTTT 60

Query: 61  SSTDDSSISIAPAFSPDSSAQSPTTATSPTGSTSAETSRLFSNGF 106
           SSTDDSSISIAPAFSPDSSAQSPTTATSPTGSTSAETSRLFSNGF
Sbjct: 61  SSTDDSSISIAPAFSPDSSAQSPTTATSPTGSTSAETSRLFSNGF 105

[Close]

BLAST of MELO3C031829 vs. ExPASy TrEMBL
Match: A0A5D3C1H7 (Cell wall protein DAN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00200 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.9e-29
Identity = 91/107 (85.05%), Postives = 96/107 (89.72%), Query Frame = 0


Query: 1   MAYQSLAFLTLIIVAITGVVAQAPSTSPTSTPATMTSSFDSSTSSSSSLDSTTTPTTTTT 60
           MAYQSLA L LI+VA+TG VAQAPSTSPTS+P TMTSS DSSTSSSSSLDSTTT TTTTT
Sbjct: 1   MAYQSLALLALIVVAVTGAVAQAPSTSPTSSPTTMTSSVDSSTSSSSSLDSTTT-TTTTT 60

Query: 61  SSTDDSSISIAPAFSPDSSAQSPTTATSPTGSTSAETSRLFSNGFFG 108
           SS D SSIS+APAFSPDSSAQSPTTATSPTGS S ETSR F+NGFFG
Sbjct: 61  SSADASSISVAPAFSPDSSAQSPTTATSPTGSPSGETSRFFTNGFFG 106

[Close]

BLAST of MELO3C031829 vs. ExPASy TrEMBL
Match: A0A5D3C1I1 (Cell wall protein DAN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00260 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 3.1e-27
Identity = 90/107 (84.11%), Postives = 94/107 (87.85%), Query Frame = 0


Query: 1   MAYQSLAFLTLIIVAITGVVAQAPSTSPTSTPATMTSSFDSSTSSSSSLDSTTTPTTTTT 60
           MAYQSLAFL LIIVA+TG VAQAP+TSPTSTPATMT    SS SSSSSLDSTT P TTT 
Sbjct: 1   MAYQSLAFLALIIVAVTGAVAQAPATSPTSTPATMT----SSASSSSSLDSTTIP-TTTI 60

Query: 61  SSTDDSSISIAPAFSPDSSAQSPTTATSPTGSTSAETSRLFSNGFFG 108
           SS D SSIS+APAFSPDSSAQSPTTATSPTGS SAETSRLF+NGFFG
Sbjct: 61  SSADASSISVAPAFSPDSSAQSPTTATSPTGSPSAETSRLFTNGFFG 102

[Close]

BLAST of MELO3C031829 vs. ExPASy TrEMBL
Match: A0A0A0LB81 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G592680 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 7.3e-21
Identity = 84/113 (74.34%), Postives = 91/113 (80.53%), Query Frame = 0


Query: 1   MAYQSLAFLTLIIVAITGVVAQAPSTSPTSTPATMTSSFDSST-SSSSSLDSTTTPTTTT 60
           MAYQSLAFL LIIVA+TGVVAQ P+   +STPA  TSSFDSST SSSSSLDSTTT TTTT
Sbjct: 1   MAYQSLAFLALIIVAVTGVVAQGPT---SSTPAPTTSSFDSSTPSSSSSLDSTTTTTTTT 60

Query: 61  TSST-----DDSSISIAPAFSPDSSAQSPTTATSPTGSTSAETSRLFSNGFFG 108
           TSS+     D  SIS+AP  +PDS AQSPTTA SPTGS SAETSR F+NGFFG
Sbjct: 61  TSSSSGSSADSPSISVAPGLAPDSYAQSPTTAASPTGS-SAETSRFFTNGFFG 109

[Close]

BLAST of MELO3C031829 vs. ExPASy TrEMBL
Match: A0A5A7UM65 (Cell wall protein DAN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold226G00560 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.1e-20
Identity = 70/73 (95.89%), Postives = 70/73 (95.89%), Query Frame = 0


Query: 35  MTSSFDSSTSSSSSLDSTTTPTTTTTSSTDDSSISIAPAFSPDSSAQSPTTATSPTGSTS 94
           MTSSFDSSTSSSSSLDSTTTPTTTTTSS DDSSISIAPAFSPDSSAQSPTTATSPT S S
Sbjct: 1   MTSSFDSSTSSSSSLDSTTTPTTTTTSSIDDSSISIAPAFSPDSSAQSPTTATSPTDSAS 60

Query: 95  AETSRLFSNGFFG 108
           AETSRLFSNGFFG
Sbjct: 61  AETSRLFSNGFFG 73

The following BLAST results are available for this feature:

BLAST of MELO3C031829 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450206.1	3.0e-37	100.00	PREDICTED: cell wall protein DAN4-like [Cucumis melo]	[more]
KAA0056285.1	4.0e-29	85.05	cell wall protein DAN4-like [Cucumis melo var. makuwa] >TYK05215.1 cell wall pro...	[more]
KAA0056279.1	6.3e-27	84.11	cell wall protein DAN4-like [Cucumis melo var. makuwa] >TYK05220.1 cell wall pro...	[more]
XP_031737565.1	1.5e-20	73.73	putative protein TPRXL [Cucumis sativus] >KAE8650787.1 hypothetical protein Csa_...	[more]
KAA0056284.1	4.4e-20	95.89	cell wall protein DAN4-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C031829 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C031829 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BPQ2	1.5e-37	100.00	cell wall protein DAN4-like OS=Cucumis melo OX=3656 GN=LOC103491867 PE=4 SV=1	[more]
A0A5D3C1H7	1.9e-29	85.05	Cell wall protein DAN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5D3C1I1	3.1e-27	84.11	Cell wall protein DAN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A0A0LB81	7.3e-21	74.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G592680 PE=4 SV=1	[more]
A0A5A7UM65	2.1e-20	95.89	Cell wall protein DAN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]

BLAST of MELO3C031829 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031829.1	MELO3C031829.1	mRNA