MELO3C031791 (gene) Melon (DHL92) v4

Overview


Name	MELO3C031791
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	GATA zinc finger domain-containing protein 10-like isoform X2
Location	chr06: 19018244 .. 19019037 (-)
RNA-Seq Expression	MELO3C031791
Synteny	MELO3C031791

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGATGGCTAAATCATAGAAGGTTTACTGCTAAGGGACCTCCAATTGAGCAATTTAATATGGATATAACTCAAGAATACATCCATTGGTACAAAAACATTACTAGGCCCTATATCACCCAATCAGGAGCTGCTGTAGGTCATCTGGTATACATTTAAATATTGTATAGTTGTTTTTAGTAAAAATTCATTTTGGATACTTTCTAATTCATTTTAATATTTTACAGAGATCGAACAATAGTAGACGTCGAAATGTTGCAGATGATCCACAACAGGTTTTAAGTATATGCAACGATGACGAGCAGTACATGGAGAACATTCACTATATGTATAATGTATCTATTGTACCTGCTCCAGTTTAGAGGAGACGTGCTTTAGTGCAAGAGCTCGATCAATTGGAAGAAGTTGACCAACACGTGAAAGAAGTGTCTCTTGTTACACAGACACAAAGCGAGCATGGTTACGTTAGTCCATCAATGATGATACCGGCATTTGGAATGACATATTATGATTCAGGATTCCGTCAATCCTCAGACTTTGGAATATAATATTATAATTAAGAGGCGGGTCTATCATCATCAAACTTTGGGCAACAATACTATGATTTAGGGAGCGATCCATCGTCTTCATACATGCATGGTCACGAGTGTAGTCGTGGAAAACATAATGAATATTTGTACTACAAAGTGCTTGCAGCGGTACTTGAGCAATCAAATGAGCAACAACAACAAGAGAATCAGGAGGAAATACAACAACAAAGAGTTTATAGTCGACGACGACAACCAGCTGAAAAT

mRNA sequence

ATGCGATGGCTAAATCATAGAAGGTTTACTGCTAAGGGACCTCCAATTGAGCAATTTAATATGGATATAACTCAAGAATACATCCATTGGTACAAAAACATTACTAGGCCCTATATCACCCAATCAGGAGCTGCTGTAGGTCATCTGGTATACATTTAAATATTAGATCGAACAATAGTAGACGTCGAAATGTTGCAGATGATCCACAACAGGTTTTAAGTATATGCAACGATGACGAGCAGTACATGGAGAACATTCACTATATGTATAATGTATCTATTGTACCTGCTCCAGTTTAGAGGAGACGTGCTTTAGTGCAAGAGCTCGATCAATTGGAAGAAGTTGACCAACACGTGAAAGAAGTGTCTCTTGTTACACAGACACAAAGCGAGCATGGTTACGTTAGTCCATCAATGATGATACCGGCATTTGGAATGACATATTATGATTCAGGATTCCGTCAATCCTCAGACTTTGGAATATAATATTATAATTAAGAGGCGGGTCTATCATCATCAAACTTTGGGCAACAATACTATGATTTAGGGAGCGATCCATCGTCTTCATACATGCATGGTCACGAGTGTAGTCGTGGAAAACATAATGAATATTTGTACTACAAAGTGCTTGCAGCGGTACTTGAGCAATCAAATGAGCAACAACAACAAGAGAATCAGGAGGAAATACAACAACAAAGAGTTTATAGTCGACGACGACAACCAGCTGAAAAT

Coding sequence (CDS)

ATGCATGGTCACGAGTGTAGTCGTGGAAAACATAATGAATATTTGTACTACAAAGTGCTTGCAGCGGTACTTGAGCAATCAAATGAGCAACAACAACAAGAGAATCAGGAGGAAATACAACAACAAAGAGTTTATAGTCGACGACGACAACCAGCTGAAAAT

Protein sequence

MHGHECSRGKHNEYLYYKVLAAVLEQSNEQQQQENQEEIQQQRVYSRRRQPAEN

Homology

[Close]

BLAST of MELO3C031791 vs. NCBI nr
Match: KAA0060411.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 103.6 bits (257), Expect = 5.4e-19
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 1   MHGHECSRGKHNEYLYYKVLAAVLEQSNEQQQQENQEEIQQQRVYSRRRQPAEN 55
           MHGHECSRGKHNEYLYYKVLAAVLEQSNEQQQQENQEEIQQQRVYSRRRQPAEN
Sbjct: 103 MHGHECSRGKHNEYLYYKVLAAVLEQSNEQQQQENQEEIQQQRVYSRRRQPAEN 156

[Close]

BLAST of MELO3C031791 vs. NCBI nr
Match: KAA0062959.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 77.0 bits (188), Expect = 5.5e-11
Identity = 43/54 (79.63%), Postives = 47/54 (87.04%), Query Frame = 0


Query: 1   MHGHECSRGKHNEYLYYKVLAAVLEQSNEQQQQENQEEIQQQRVYSRRRQPAEN 55
           MHGHE  RG+H EYLYY+V AAV EQS+EQQQQENQEEIQ+QRV SRRRQPA N
Sbjct: 53  MHGHEHGRGEHIEYLYYEVPAAVPEQSDEQQQQENQEEIQKQRVQSRRRQPARN 106

[Close]

BLAST of MELO3C031791 vs. NCBI nr
Match: TYK16383.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 73.9 bits (180), Expect = 4.6e-10
Identity = 41/54 (75.93%), Postives = 46/54 (85.19%), Query Frame = 0


Query: 1   MHGHECSRGKHNEYLYYKVLAAVLEQSNEQQQQENQEEIQQQRVYSRRRQPAEN 55
           +HGHE   G+H EYLYY+V AAV EQS+EQQQQENQEEIQ+QRV SRRRQPA N
Sbjct: 53  LHGHEHGHGEHIEYLYYEVPAAVPEQSDEQQQQENQEEIQKQRVQSRRRQPARN 106

[Close]

BLAST of MELO3C031791 vs. NCBI nr
Match: TYK02811.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 71.2 bits (173), Expect = 3.0e-09
Identity = 45/69 (65.22%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 1   MHGHECSRGKHNEYLYYKVLAAVLEQSN---------------EQQQQENQEEIQQQRVY 55
           MHGH   RG+HNEYLYY+V AAV EQSN               EQQQQENQEEIQQQRV 
Sbjct: 53  MHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQ 112

[Close]

BLAST of MELO3C031791 vs. NCBI nr
Match: KAA0051098.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa] >TYK02687.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 71.2 bits (173), Expect = 3.0e-09
Identity = 39/54 (72.22%), Postives = 43/54 (79.63%), Query Frame = 0


Query: 1   MHGHECSRGKHNEYLYYKVLAAVLEQSNEQQQQENQEEIQQQRVYSRRRQPAEN 55
           MHGH   RG+HNEYLYY   AAV E+ NEQQQQENQEE+QQQRV SRR QP +N
Sbjct: 378 MHGHGRGRGEHNEYLYYVAPAAVSEEPNEQQQQENQEELQQQRVQSRRGQPTKN 431

[Close]

BLAST of MELO3C031791 vs. ExPASy TrEMBL
Match: A0A5A7V3V8 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G002250 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.6e-19
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 1   MHGHECSRGKHNEYLYYKVLAAVLEQSNEQQQQENQEEIQQQRVYSRRRQPAEN 55
           MHGHECSRGKHNEYLYYKVLAAVLEQSNEQQQQENQEEIQQQRVYSRRRQPAEN
Sbjct: 103 MHGHECSRGKHNEYLYYKVLAAVLEQSNEQQQQENQEEIQQQRVYSRRRQPAEN 156

[Close]

BLAST of MELO3C031791 vs. ExPASy TrEMBL
Match: A0A5A7VBH9 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00540 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.6e-11
Identity = 43/54 (79.63%), Postives = 47/54 (87.04%), Query Frame = 0


Query: 1   MHGHECSRGKHNEYLYYKVLAAVLEQSNEQQQQENQEEIQQQRVYSRRRQPAEN 55
           MHGHE  RG+H EYLYY+V AAV EQS+EQQQQENQEEIQ+QRV SRRRQPA N
Sbjct: 53  MHGHEHGRGEHIEYLYYEVPAAVPEQSDEQQQQENQEEIQKQRVQSRRRQPARN 106

[Close]

BLAST of MELO3C031791 vs. ExPASy TrEMBL
Match: A0A5D3CWX5 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001770 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.2e-10
Identity = 41/54 (75.93%), Postives = 46/54 (85.19%), Query Frame = 0


Query: 1   MHGHECSRGKHNEYLYYKVLAAVLEQSNEQQQQENQEEIQQQRVYSRRRQPAEN 55
           +HGHE   G+H EYLYY+V AAV EQS+EQQQQENQEEIQ+QRV SRRRQPA N
Sbjct: 53  LHGHEHGHGEHIEYLYYEVPAAVPEQSDEQQQQENQEEIQKQRVQSRRRQPARN 106

[Close]

BLAST of MELO3C031791 vs. ExPASy TrEMBL
Match: A0A5A7U731 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1161G00130 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-09
Identity = 39/54 (72.22%), Postives = 43/54 (79.63%), Query Frame = 0


Query: 1   MHGHECSRGKHNEYLYYKVLAAVLEQSNEQQQQENQEEIQQQRVYSRRRQPAEN 55
           MHGH   RG+HNEYLYY   AAV E+ NEQQQQENQEE+QQQRV SRR QP +N
Sbjct: 378 MHGHGRGRGEHNEYLYYVAPAAVSEEPNEQQQQENQEELQQQRVQSRRGQPTKN 431

[Close]

BLAST of MELO3C031791 vs. ExPASy TrEMBL
Match: A0A5D3BSU2 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1418G00180 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-09
Identity = 45/69 (65.22%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 1   MHGHECSRGKHNEYLYYKVLAAVLEQSN---------------EQQQQENQEEIQQQRVY 55
           MHGH   RG+HNEYLYY+V AAV EQSN               EQQQQENQEEIQQQRV 
Sbjct: 53  MHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQ 112

The following BLAST results are available for this feature:

BLAST of MELO3C031791 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060411.1	5.4e-19	100.00	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]
KAA0062959.1	5.5e-11	79.63	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]
TYK16383.1	4.6e-10	75.93	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]
TYK02811.1	3.0e-09	65.22	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]
KAA0051098.1	3.0e-09	72.22	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]

BLAST of MELO3C031791 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C031791 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V3V8	2.6e-19	100.00	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]
A0A5A7VBH9	2.6e-11	79.63	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]
A0A5D3CWX5	2.2e-10	75.93	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]
A0A5A7U731	1.4e-09	72.22	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5D3BSU2	1.4e-09	65.22	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]

BLAST of MELO3C031791 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 21..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031791.1	MELO3C031791.1	mRNA