MELO3C031790 (gene) Melon (DHL92) v4

Overview


Name	MELO3C031790
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Mediator of RNA polymerase II transcription subunit 12-like isoform X1
Location	chr06: 14942565 .. 14943428 (+)
RNA-Seq Expression	MELO3C031790
Synteny	MELO3C031790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTGCTCATTTAGTGATGCGATGGCATAATCGCAGAAGGTTTACTGCTACGGGACCTCCAATTGAGCAGTTTGATATGGATGTAACTCAAGAATACACCCATTGGTACAAAAACATTAGCAAGCTCTATATCACCCAACTGGGAGCTGCTATGAGTCATCTGGTATACATTTAAAAATTGTATATTTGTTTTTAGTGTTAATTTATTTTCAATGATTTCTAATTCATTTTAATATTTTACAGAGATCAAACAATATTAGACTTCGGAATGTTGCAGATGATCCACAACAGGTTCTAAATATATGCAACGATAACGAGCAGTACATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTGCTCCAGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTGACCAACACGGGGAAGAAGTGCCTCCAATGACAGAGACACAAAGCGAACATAATTACGTTAGTCCAGTAATGATGATGCCAACATTTGAAACGACATATTATGATTCAGGAGTCGGTCAATCGTTAGACTTTGGAAGAGGATATTACAATTCAGAGGCAGGTCAATCATCAACGGACTTTGGGCAACAATACTATGATTAGGGAGCGATCCATCGTCTTCATACATGCATGGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACGAAGTGCCTGCAGCGGTACTTGAACAATCAGATGAGCTACAACAACAAGAGAATGCAGCAGTACCCGAGCAATTAGATGAGCAACAACAACAAGAGAATCAGGAGGAAATACAACATCAGAGAGTTCAAAGTTGACGACGACAACCAGCTAGAAATCGTCGACGTC

mRNA sequence

AGTTGCTCATTTAGTGATGCGATGGCATAATCGCAGAAGGTTTACTGCTACGGGACCTCCAATTGAGCAGTTTGATATGGATGTAACTCAAGAATACACCCATTGGTACAAAAACATTAGCAAGCTCTATATCACCCAACTGGGAGCTGCTATGAGTCATCTGAGATCAAACAATATTAGACTTCGGAATGTTGCAGATGATCCACAACAGGTTCTAAATATATGCAACGATAACGAGCAGTACATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTGCTCCAGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTGACCAACACGGGGAAGAAGTGCCTCCAATGACAGAGACACAAAGCGAACATAATTACGTTAGTCCAGTAATGATGATGCCAACATTTGAAACGACATATTATGATTCAGGAGTCGGTCAATCGTTAGACTTTGGAAGAGGATATTACAATTCAGAGGCAGGGAGCGATCCATCGTCTTCATACATGCATGGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACGAAGTGCCTGCAGCGGTACTTGAACAATCAGATGAGCAACAACAACAAGAGAATCAGGAGGAAATACAACATCAGAGAGTTCAAAGTTGACGACGACAACCAGCTAGAAATCGTCGACGTC

Coding sequence (CDS)

ATGCGATGGCATAATCGCAGAAGGTTTACTGCTACGGGACCTCCAATTGAGCAGTTTGATATGGATGTAACTCAAGAATACACCCATTGGTACAAAAACATTAGCAAGCTCTATATCACCCAACTGGGAGCTGCTATGAGTCATCTGAGATCAAACAATATTAGACTTCGGAATGTTGCAGATGATCCACAACAGGTTCTAAATATATGCAACGATAACGAGCAGTACATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTGCTCCAGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTGACCAACACGGGGAAGAAGTGCCTCCAATGACAGAGACACAAAGCGAACATAATTACGTTAGTCCAGTAATGATGATGCCAACATTTGAAACGACATATTATGATTCAGGAGTCGGTCAATCGTTAGACTTTGGAAGAGGATATTACAATTCAGAGGCAGGGAGCGATCCATCGTCTTCATACATGCATGGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACGAAGTGCCTGCAGCGGTACTTGAACAATCAGATGAGCAACAACAACAAGAGAATCAGGAGGAAATACAACATCAGAGAGTTCAAAGTTGA

Protein sequence

MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEAGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQENQEEIQHQRVQS

Homology

[Close]

BLAST of MELO3C031790 vs. NCBI nr
Match: KAA0036767.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 392.9 bits (1008), Expect = 1.8e-105
Identity = 205/245 (83.67%), Postives = 209/245 (85.31%), Query Frame = 0


Query: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVA 60
           MRWHNRRRFTATGPPIEQFDMDVTQEY HWYKNISKLYITQ GAAMSHLRSNNIRLRNVA
Sbjct: 253 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 312

Query: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMT 120
           DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHG+EVPPMT
Sbjct: 313 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMT 372

Query: 121 ETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEA--------------GSDP 180
           +TQSEHNYVSPVMMMPTF TTYYDSGVGQS DFGRGYYNS+A              GSDP
Sbjct: 373 QTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSDP 432

Query: 181 SSSYMHGHGRGRGEHNEYLYYEVPAAVLE---------------QSDEQQQQENQEEIQH 217
           SSSYMHGHGRGRG+HNEYLYYEVPAAV E               QSDEQQQQEN EEIQ 
Sbjct: 433 SSSYMHGHGRGRGKHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDEQQQQENHEEIQQ 492

[Close]

BLAST of MELO3C031790 vs. NCBI nr
Match: TYJ95836.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 392.9 bits (1008), Expect = 1.8e-105
Identity = 205/245 (83.67%), Postives = 209/245 (85.31%), Query Frame = 0


Query: 1    MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVA 60
            MRWHNRRRFTATGPPIEQFDMDVTQEY HWYKNISKLYITQ GAAMSHLRSNNIRLRNVA
Sbjct: 1014 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 1073

Query: 61   DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMT 120
            DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHG+EVPPMT
Sbjct: 1074 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMT 1133

Query: 121  ETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEA--------------GSDP 180
            +TQSEHNYVSPVMMMPTF TTYYDSGVGQS DFGRGYYNS+A              GSDP
Sbjct: 1134 QTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSDP 1193

Query: 181  SSSYMHGHGRGRGEHNEYLYYEVPAAVLE---------------QSDEQQQQENQEEIQH 217
            SSSYMHGHGRGRG+HNEYLYYEVPAAV E               QSDEQQQQEN EEIQ 
Sbjct: 1194 SSSYMHGHGRGRGKHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDEQQQQENHEEIQQ 1253

[Close]

BLAST of MELO3C031790 vs. NCBI nr
Match: KAA0067080.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 392.1 bits (1006), Expect = 3.1e-105
Identity = 206/245 (84.08%), Postives = 208/245 (84.90%), Query Frame = 0


Query: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVA 60
           MRWHNRRRFTATGPPIEQFDMDVTQEY +WYKNISKLYITQ GA MSHLRSNNIRLRNVA
Sbjct: 366 MRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAVMSHLRSNNIRLRNVA 425

Query: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMT 120
           DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMT
Sbjct: 426 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMT 485

Query: 121 ETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEA--------------GSDP 180
           +TQSEHNYVSPVMMMPTF TTYYDS VGQS DFGRGYYNSEA              GSDP
Sbjct: 486 QTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDP 545

Query: 181 SSSYMHGHGRGRGEHNEYLYYEVPAAVLE---------------QSDEQQQQENQEEIQH 217
           SSSYMHGHGRGRGEHNEYLYYEVPAAV E               QSDEQQQQENQEEIQ 
Sbjct: 546 SSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQ 605

[Close]

BLAST of MELO3C031790 vs. NCBI nr
Match: XP_008449513.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo])

HSP 1 Score: 382.1 bits (980), Expect = 3.2e-102
Identity = 202/246 (82.11%), Postives = 205/246 (83.33%), Query Frame = 0


Query: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVA 60
           MRWHNRRRFTATGPPIEQFDMDVTQEY HWYKNISKLYITQ GAAMSHLRSNN RLRN+A
Sbjct: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIA 60

Query: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPM- 120
           DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQE DQLEEVDQHGEEVPPM 
Sbjct: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDQLEEVDQHGEEVPPMT 120

Query: 121 -TETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEA--------------GS 180
            T+TQSEHNYVSPVMMMPTF  TYYDSGVGQS DFGRGYYNSEA              GS
Sbjct: 121 QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 180

Query: 181 DPSSSYMHGHGRGRGEHNEYLYYEVP---------------AAVLEQSDEQQQQENQEEI 216
           DPSSSYMHGHGRGRGEHNEYLYY+VP               AAV EQSDEQQQQEN EEI
Sbjct: 181 DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 240

[Close]

BLAST of MELO3C031790 vs. NCBI nr
Match: TYK27427.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 382.1 bits (980), Expect = 3.2e-102
Identity = 202/246 (82.11%), Postives = 205/246 (83.33%), Query Frame = 0


Query: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVA 60
           MRWHNRRRFTATGPPIEQFDMDVTQEY HWYKNISKLYITQ GAAMSHLRSNN RLRN+A
Sbjct: 744 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIA 803

Query: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPM- 120
           DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQE DQLEEVDQHGEEVPPM 
Sbjct: 804 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDQLEEVDQHGEEVPPMT 863

Query: 121 -TETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEA--------------GS 180
            T+TQSEHNYVSPVMMMPTF  TYYDSGVGQS DFGRGYYNSEA              GS
Sbjct: 864 QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 923

Query: 181 DPSSSYMHGHGRGRGEHNEYLYYEVP---------------AAVLEQSDEQQQQENQEEI 216
           DPSSSYMHGHGRGRGEHNEYLYY+VP               AAV EQSDEQQQQEN EEI
Sbjct: 924 DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 983

[Close]

BLAST of MELO3C031790 vs. ExPASy TrEMBL
Match: A0A5D3BAB0 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001240 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 8.7e-106
Identity = 205/245 (83.67%), Postives = 209/245 (85.31%), Query Frame = 0


Query: 1    MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVA 60
            MRWHNRRRFTATGPPIEQFDMDVTQEY HWYKNISKLYITQ GAAMSHLRSNNIRLRNVA
Sbjct: 1014 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 1073

Query: 61   DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMT 120
            DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHG+EVPPMT
Sbjct: 1074 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMT 1133

Query: 121  ETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEA--------------GSDP 180
            +TQSEHNYVSPVMMMPTF TTYYDSGVGQS DFGRGYYNS+A              GSDP
Sbjct: 1134 QTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSDP 1193

Query: 181  SSSYMHGHGRGRGEHNEYLYYEVPAAVLE---------------QSDEQQQQENQEEIQH 217
            SSSYMHGHGRGRG+HNEYLYYEVPAAV E               QSDEQQQQEN EEIQ 
Sbjct: 1194 SSSYMHGHGRGRGKHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDEQQQQENHEEIQQ 1253

[Close]

BLAST of MELO3C031790 vs. ExPASy TrEMBL
Match: A0A5A7T598 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G00500 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 8.7e-106
Identity = 205/245 (83.67%), Postives = 209/245 (85.31%), Query Frame = 0


Query: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVA 60
           MRWHNRRRFTATGPPIEQFDMDVTQEY HWYKNISKLYITQ GAAMSHLRSNNIRLRNVA
Sbjct: 253 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIRLRNVA 312

Query: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMT 120
           DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHG+EVPPMT
Sbjct: 313 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMT 372

Query: 121 ETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEA--------------GSDP 180
           +TQSEHNYVSPVMMMPTF TTYYDSGVGQS DFGRGYYNS+A              GSDP
Sbjct: 373 QTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSDP 432

Query: 181 SSSYMHGHGRGRGEHNEYLYYEVPAAVLE---------------QSDEQQQQENQEEIQH 217
           SSSYMHGHGRGRG+HNEYLYYEVPAAV E               QSDEQQQQEN EEIQ 
Sbjct: 433 SSSYMHGHGRGRGKHNEYLYYEVPAAVPEQSDELQQQENAAVPGQSDEQQQQENHEEIQQ 492

[Close]

BLAST of MELO3C031790 vs. ExPASy TrEMBL
Match: A0A5A7VIP6 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G001330 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.5e-105
Identity = 206/245 (84.08%), Postives = 208/245 (84.90%), Query Frame = 0


Query: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVA 60
           MRWHNRRRFTATGPPIEQFDMDVTQEY +WYKNISKLYITQ GA MSHLRSNNIRLRNVA
Sbjct: 366 MRWHNRRRFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAVMSHLRSNNIRLRNVA 425

Query: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMT 120
           DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMT
Sbjct: 426 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMT 485

Query: 121 ETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEA--------------GSDP 180
           +TQSEHNYVSPVMMMPTF TTYYDS VGQS DFGRGYYNSEA              GSDP
Sbjct: 486 QTQSEHNYVSPVMMMPTFGTTYYDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDP 545

Query: 181 SSSYMHGHGRGRGEHNEYLYYEVPAAVLE---------------QSDEQQQQENQEEIQH 217
           SSSYMHGHGRGRGEHNEYLYYEVPAAV E               QSDEQQQQENQEEIQ 
Sbjct: 546 SSSYMHGHGRGRGEHNEYLYYEVPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQ 605

[Close]

BLAST of MELO3C031790 vs. ExPASy TrEMBL
Match: A0A5D3DUI1 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G001210 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.5e-102
Identity = 202/246 (82.11%), Postives = 205/246 (83.33%), Query Frame = 0


Query: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVA 60
           MRWHNRRRFTATGPPIEQFDMDVTQEY HWYKNISKLYITQ GAAMSHLRSNN RLRN+A
Sbjct: 744 MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIA 803

Query: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPM- 120
           DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQE DQLEEVDQHGEEVPPM 
Sbjct: 804 DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDQLEEVDQHGEEVPPMT 863

Query: 121 -TETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEA--------------GS 180
            T+TQSEHNYVSPVMMMPTF  TYYDSGVGQS DFGRGYYNSEA              GS
Sbjct: 864 QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 923

Query: 181 DPSSSYMHGHGRGRGEHNEYLYYEVP---------------AAVLEQSDEQQQQENQEEI 216
           DPSSSYMHGHGRGRGEHNEYLYY+VP               AAV EQSDEQQQQEN EEI
Sbjct: 924 DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 983

[Close]

BLAST of MELO3C031790 vs. ExPASy TrEMBL
Match: A0A1S3BLK4 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491376 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.5e-102
Identity = 202/246 (82.11%), Postives = 205/246 (83.33%), Query Frame = 0


Query: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVA 60
           MRWHNRRRFTATGPPIEQFDMDVTQEY HWYKNISKLYITQ GAAMSHLRSNN RLRN+A
Sbjct: 1   MRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIA 60

Query: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPM- 120
           DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQE DQLEEVDQHGEEVPPM 
Sbjct: 61  DDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQESDQLEEVDQHGEEVPPMT 120

Query: 121 -TETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEA--------------GS 180
            T+TQSEHNYVSPVMMMPTF  TYYDSGVGQS DFGRGYYNSEA              GS
Sbjct: 121 QTQTQSEHNYVSPVMMMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGS 180

Query: 181 DPSSSYMHGHGRGRGEHNEYLYYEVP---------------AAVLEQSDEQQQQENQEEI 216
           DPSSSYMHGHGRGRGEHNEYLYY+VP               AAV EQSDEQQQQEN EEI
Sbjct: 181 DPSSSYMHGHGRGRGEHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEI 240

The following BLAST results are available for this feature:

BLAST of MELO3C031790 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036767.1	1.8e-105	83.67	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
TYJ95836.1	1.8e-105	83.67	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
KAA0067080.1	3.1e-105	84.08	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]
XP_008449513.1	3.2e-102	82.11	PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X...	[more]
TYK27427.1	3.2e-102	82.11	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]

BLAST of MELO3C031790 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C031790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BAB0	8.7e-106	83.67	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5A7T598	8.7e-106	83.67	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5A7VIP6	1.5e-105	84.08	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A5D3DUI1	1.5e-102	82.11	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A1S3BLK4	1.5e-102	82.11	mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]

BLAST of MELO3C031790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031790.1	MELO3C031790.1	mRNA