MELO3C031764 (gene) Melon (DHL92) v4

Overview


Name	MELO3C031764
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Retrotransposon protein
Location	chr06: 16702850 .. 16706929 (-)
RNA-Seq Expression	MELO3C031764
Synteny	MELO3C031764

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGGTCTTTCGCTTGGCAATAAGACAGATACTTCACTCTGCCATTGGATGTCGATGGAGCTTGGTAGGGAGGTATTGGAGTTTTCAATCCACTTTTTTTTAAAGCCGATGATGAGTTCGATTTTTGTGTAAAACTGAATTCTTTTGTAATGTATGTATTTGTTCGCATTCTGTTGTGTCTTCTGTCTTATTTGTTTACATTTTCCAGCCATGTGTTCTGTATTATTCCGGCCATGTCGTCTGTGTTATTGCTTTACCTTTGGTGGCCATGTCTTCTGTATTATTGCACCCATGTGTTCTGTGTTATTGGTTAAATTTCTCCGGCCATGTTACAATTATGTTACAATTCTGTTATGTCTTCTCTGTATTCTTACCAATTTTGTTACAATTCTTCTATTTTTTTACAATTCTTCTATTCTTATCTCTCTGTACAATTCTTCTATGTCTTCTCTGTATTCTTTTGTTACATATTATTTTCTTACAAATTTTGTTACATTTCTTCTATTCTTATCTCTCTGTATTGTTAAATTCTTCTATTATTTTCATAGTGTATTCTTATCTCTCTGTATTGTTGCCATGTCTTTATTAGTGTTGTCTCTTCCATCTGTTTTTATTGTATGGTTTTGACTTCATATTTGCTTACAAAATTTGTTACAATCCTTCTATTCTTATCTCTCTGTATTGTTACATTCTTCATTTACTTTCATACTGTATTTGTCTTCCTTTCTGTCCAGTGTTGTATCTTCCATCTGTTTTTAGTGTATGGTTTTGGTATAGGTTTCAGTATATAGCCTTTGACTCTTTGGACTTTGCTATGCTTTATGTCAGTTGTAGCAGAGAGATTCCCTATCTTTTATTGATAGATAGGTTGCAGTCCATTACTTTGGTCTTTATTTTTTGGTTTACCTCCCATCAAGTCCTCTCAACTTGCCCCATCTTTCCTCTATATATTACCACGTTTCCTCTTTTGATTCACTGCATTCTTGTCTCTCTTTGTATCCTCTCTCTGGTTCTAACTTATCTTTTGTAAGTTCTCTTTTTCTTTTTCTCTGTTTGCTGATTCTTCATTACTGTTAGCATATATCATTACTGTAATTTCCCTTTTCCTATATCATTCTGTTCTCCTTTTTGTATATGTTTATGCACAACTTTTCTTTTAGGTTGGTGTCCTTTTCTGTTATGTTTTTGTGATATGTTTTCTATACCTTTCTGTCCTTTATTTTTTTATCTATAACTATAATGGAATTCCATTCATTATTTTGAATGGAATCAAAACTCTGAGGCTATTAATTTAAAAATAAACTTATTCTTTCGGTTTCCCGTTTCAATCTTCATTTCGAGTAACATTTTTCGTCATAAAAGGTATGTATATGTAATATTTTTTTTCATACCTTCTATATTGTGTGTTATGTACAAATAATAATCATCTTGTTGTCATATGTAGGACGTTGCGACGAACGAGTTGGAAAATATTTCAAGAGGTACTCTTGTAATGGCCGTTTGTAGGCTTTCTATATTGTATTTTTTTATTTTTTTTCGGTTTTGTATAATTTTATAATTAACATTTTGTTTGGGTTTATAATATGTATATAGAACATTCAGTTTAATTTTGTTACATATTGTATCCTATTAATTTTCTCTTTTTTAACTATTTTTTTTTCTATATAGTAAGAACAATTTGCATTAACAAAATATGCAATTAATTCGATAAAATATGATAATAAAGGGGATTTCAATATCATAATTCGGTAAAAATTTGAGTAATGCATATCAAAAACTCCATATGAACAACCCTTCCCTAATAGTGATTTTTTAATATCATCATAAATTGAAATATGAACAACTTTTTAGTAATAGTGTTTTTTCAATATAATCACAACTTTTGATATTAATTAAATTATATTAAGGGAATACACATTTCATAAACTTCTTCAATATGTCTTTAATAAACTTCTTCAAACTTCTTCAATAAGTACTTCTTCAAACTTCTTCATAAACTTCTTCAAACTTCTTCAATAAGTACTATTATTCAGTTTTTTTTAAAAAAAAAGAAACTTCTTCAAACTTCTTCAATAAGTACTTCTTCAAACTTCTTCATAAACTTCTTCAAACTTCTTCAATAAGTACTATTGTTCGGTTTTTTAAAAAAAAGAAACTTCTTCAAACTTCTTCATAAACTTCTTAAAAAATTGAAATATGTTCAATGAGTACTATTGTTCAATAAGTACTTCTTGTTGTCTTTATTGGATTTTTTTTCCTTTTTTCTTATATTTTTCTTTTCTTTTAACCTTTTCTATGTTTTGTTTAATTTTTTTTTTTATTTTCAACCAAATTTATTTCTATTTTTAAAATACTTAATTTAGAACTAAAATACATTGTAAAATTTGTTGAAAATAAAATAAAATTATAAGTAAAAATTTCAAATTACAAATTCCAAACTATTGTTCGGTTTTCAAAAAAAAGAGTCTTAAAAATTAGGGGTGCTTTAAGAAAAAAAAACACAAAGGAAAATTAGTTAAAAGGAATTGAGTTGAAAAATATTAGGAAAATAGGATAAACTTCCATTTGCAACTTCTTTAATTTTATGTATCATTTTCAATGTTCTGGTCACTCATAATCTATTTTTTTTGTTCTATGTTTATGGTTTTACGAAATACGGATATTACTAAGTTTACAGATCTTTTCACAATATATCGATATTGTACTAATTTAATTAGTACATGTTTTTTAGGGAACTTTACATACATTGTAATGGATGAACAAATACTTATTGGAGTCCTAACTGCATTCACGTTGGCCCAACGTCAGATTTTACTAACGTTGGAGCTATTAATGAACAACAATAAGCGTCTCCCACATACACCGCCCGATACACGCCATAGAATTAGGGAGCTTGCTTACTTTCGCATGATACACGAGTCAGATCTTGTGTGTCGGCAAAGCACGCGGATGGATAGGCGAACATTCGCAATTCTATGCCATTTACTTAGAAATGTGGCTGGTCTTTCTTCAACTGAAATTGTCGATGTTGAGGAAATGGTAGCAATGTTCTTGCATGTCATCGCTCATGACATGAAGAACCGCGTCATCCAACGGGAATTTGTACGGTCCGGTGAGACAGTATCTCGACATTTCAACATCGTATTGTTGGCTGTTCTTCGACTGTACGAGGAGTTGATAAAGAGACCTGTTCCGGTAACAAGTAACTGCAATGATCAACGTTGGAAGTGTTTCGAGGTGGGCATCATAGAAGTTCACTATATTTCACCTTTACGTACATCGCACTTAATTGAATGTGTTTATTTCAACCTGCAGAACTGCCTTGGCGCGTTAGACGGGACGTACATAAAGGTCAACGTCCCCGTAGGAGATTGGCCTACATTCAGAACGCGTAAGGGGGAAATTGCCACAAACGTTCTGGGAGTCTGTGACACGAAAGGGGATTTCGTTTATGTCCTCGCCGGTTGGGAAGGATCCGCAGCAAACTCGTGGATCCTACGTGATGCGATTTCACGAGAAAATGGACTACAAGTGCCAAAGGGTATATCTTCTTTATAATAAAACACCGTCGCTTCCTACTTACCTATTTAAAGGTCATAAACAAACCATTTAATAACAGGATATTATTATCTGTGCGATGCGGGATATCTAAACGCGGAGGGGTTTCTCGCCCCGTACAGAGGCCAACGGTACCATTTGCAAGAGTGGCGTGGTGCTGCAAATGCGACAACAAATGCAAAGGAGTACTTCAACATGAAGCACTCCTCGGCAAGGAATGTTATTGAGCGCGTGTTCGGTGTTCTCAAGGGTCGTTGGGCCATTCTTCGTGGAAAGTCGTATTATCCCCTGCAAGTCCAGTGTCGCACCATTCTAGCATGTGCCTTGCTTCACAATTTGATCAACAGGAAAATGACATATTGCGACGACGTTGACGACGAGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAATGGTGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGTAACGCTTAG

mRNA sequence

ATGTCCGGTCTTTCGCTTGGCAATAAGACAGATACTTCACTCTGCCATTGGATGTCGATGGAGCTTGGTAGGGAGATTTTACTAACGTTGGAGCTATTAATGAACAACAATAAGCGTCTCCCACATACACCGCCCGATACACGCCATAGAATTAGGGAGCTTGCTTACTTTCGCATGATACACGAGTCAGATCTTGTGTGTCGGCAAAGCACGCGGATGGATAGGCGAACATTCGCAATTCTATGCCATTTACTTAGAAATGTGGCTGGTCTTTCTTCAACTGAAATTGTCGATGTTGAGGAAATGGTAGCAATGTTCTTGCATGTCATCGCTCATGACATGAAGAACCGCGTCATCCAACGGGAATTTGTACGGTCCGGTGAGACAGTATCTCGACATTTCAACATCGTATTGTTGGCTGTTCTTCGACTGTACGAGGAGTTGATAAAGAGACCTGTTCCGAACTGCCTTGGCGCGTTAGACGGGACGTACATAAAGGTCAACGTCCCCGTAGGAGATTGGCCTACATTCAGAACGCGTAAGGGGGAAATTGCCACAAACGTTCTGGGAGTCTGTGACACGAAAGGGGATTTCGTTTATGTCCTCGCCGGTTGGGAAGGATCCGCAGCAAACTCGTGGATCCTACGTGATGCGATTTCACGAGAAAATGGACTACAAGTGCCAAAGGGATATTATTATCTGTGCGATGCGGGATATCTAAACGCGGAGGGGTTTCTCGCCCCGTACAGAGGCCAACGGTACCATTTGCAAGAGTGGCGTGGTGCTGCAAATGCGACAACAAATGCAAAGGAGTACTTCAACATGAAGCACTCCTCGGCAAGGAATGTTATTGAGCGCGTGTTCGGTGTTCTCAAGGGTCGTTGGGCCATTCTTCGTGGAAAGTCGTATTATCCCCTGCAAGTCCAGTGTCGCACCATTCTAGCATGTGCCTTGCTTCACAATTTGATCAACAGGAAAATGACATATTGCGACGACGTTGACGACGAGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAATGGTGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGTAACGCTTAG

Coding sequence (CDS)

ATGTCCGGTCTTTCGCTTGGCAATAAGACAGATACTTCACTCTGCCATTGGATGTCGATGGAGCTTGGTAGGGAGATTTTACTAACGTTGGAGCTATTAATGAACAACAATAAGCGTCTCCCACATACACCGCCCGATACACGCCATAGAATTAGGGAGCTTGCTTACTTTCGCATGATACACGAGTCAGATCTTGTGTGTCGGCAAAGCACGCGGATGGATAGGCGAACATTCGCAATTCTATGCCATTTACTTAGAAATGTGGCTGGTCTTTCTTCAACTGAAATTGTCGATGTTGAGGAAATGGTAGCAATGTTCTTGCATGTCATCGCTCATGACATGAAGAACCGCGTCATCCAACGGGAATTTGTACGGTCCGGTGAGACAGTATCTCGACATTTCAACATCGTATTGTTGGCTGTTCTTCGACTGTACGAGGAGTTGATAAAGAGACCTGTTCCGAACTGCCTTGGCGCGTTAGACGGGACGTACATAAAGGTCAACGTCCCCGTAGGAGATTGGCCTACATTCAGAACGCGTAAGGGGGAAATTGCCACAAACGTTCTGGGAGTCTGTGACACGAAAGGGGATTTCGTTTATGTCCTCGCCGGTTGGGAAGGATCCGCAGCAAACTCGTGGATCCTACGTGATGCGATTTCACGAGAAAATGGACTACAAGTGCCAAAGGGATATTATTATCTGTGCGATGCGGGATATCTAAACGCGGAGGGGTTTCTCGCCCCGTACAGAGGCCAACGGTACCATTTGCAAGAGTGGCGTGGTGCTGCAAATGCGACAACAAATGCAAAGGAGTACTTCAACATGAAGCACTCCTCGGCAAGGAATGTTATTGAGCGCGTGTTCGGTGTTCTCAAGGGTCGTTGGGCCATTCTTCGTGGAAAGTCGTATTATCCCCTGCAAGTCCAGTGTCGCACCATTCTAGCATGTGCCTTGCTTCACAATTTGATCAACAGGAAAATGACATATTGCGACGACGTTGACGACGAGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAATGGTGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGTAACGCTTAG

Protein sequence

MSGLSLGNKTDTSLCHWMSMELGREILLTLELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVIAHDMKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPNCLGALDGTYIKVNVPVGDWPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAANSWILRDAISRENGLQVPKGYYYLCDAGYLNAEGFLAPYRGQRYHLQEWRGAANATTNAKEYFNMKHSSARNVIERVFGVLKGRWAILRGKSYYPLQVQCRTILACALLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWCDDLAESMFTEWQLRNA

Homology

[Close]

BLAST of MELO3C031764 vs. NCBI nr
Match: KAA0062587.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 682.6 bits (1760), Expect = 2.0e-192
Identity = 331/348 (95.11%), Postives = 339/348 (97.41%), Query Frame = 0


Query: 34  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 93
           MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 94  TEIVDVEEMVAMFLHVIAHDMKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 153
           TEIVDVEEMVAMFLHV+AHD+KNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 120

Query: 154 PNCLGALDGTYIKVNVPVGDWPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAANSW 213
           PNCLGALDGTYIKVNVP GD PTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAA+S 
Sbjct: 121 PNCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSQ 180

Query: 214 ILRDAISRENGLQVPKGYYYLCDAGYLNAEGFLAPYRGQRYHLQEWRGAANATTNAKEYF 273
           ILRDAISRENGLQVPKGYYYLCDAGY NAEGFLAPYRGQRYHLQEWRGAANA TNAKEYF
Sbjct: 181 ILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEWRGAANAPTNAKEYF 240

Query: 274 NMKHSSARNVIERVFGVLKGRWAILRGKSYYPLQVQCRTILACALLHNLINRKMTYCDDV 333
           NMKHSSA+NVIER FGVLKGRWAILRGKSYYPLQVQCRTILACALLHNLINR+MTYCDDV
Sbjct: 241 NMKHSSAKNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALLHNLINREMTYCDDV 300

Query: 334 DDEDEGDSTYATTTASEDIQYIETTNEWSQWCDDLAESMFTEWQLRNA 382
           +DEDEGDSTYATTTASEDIQYI+TTNEWSQW DDLA SMFT+WQ RNA
Sbjct: 301 EDEDEGDSTYATTTASEDIQYIKTTNEWSQWRDDLAASMFTDWQFRNA 348

[Close]

BLAST of MELO3C031764 vs. NCBI nr
Match: KAA0051443.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 680.6 bits (1755), Expect = 7.6e-192
Identity = 331/348 (95.11%), Postives = 339/348 (97.41%), Query Frame = 0


Query: 34  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 93
           MNNNKRLPHTPPDTRHRIRELAYFRMI+ESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIYESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 94  TEIVDVEEMVAMFLHVIAHDMKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 153
           TEIVDVEEMVAMFLHV+AHD+KNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 120

Query: 154 PNCLGALDGTYIKVNVPVGDWPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAANSW 213
           PNCLGALDGTYIKVNVP GD PTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAA+S 
Sbjct: 121 PNCLGALDGTYIKVNVPTGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSR 180

Query: 214 ILRDAISRENGLQVPKGYYYLCDAGYLNAEGFLAPYRGQRYHLQEWRGAANATTNAKEYF 273
           ILRDAISRENGLQVPKGYYYLCDAGY NAEGFLAPYRGQRYHLQEWRGAANA TNAKEYF
Sbjct: 181 ILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEWRGAANAPTNAKEYF 240

Query: 274 NMKHSSARNVIERVFGVLKGRWAILRGKSYYPLQVQCRTILACALLHNLINRKMTYCDDV 333
           NMKHSSARNVIER FGVLKGRWAILRGKSYYPLQVQCRTILACALLHNLINR+MTYCDDV
Sbjct: 241 NMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALLHNLINREMTYCDDV 300

Query: 334 DDEDEGDSTYATTTASEDIQYIETTNEWSQWCDDLAESMFTEWQLRNA 382
           +DEDEGDSTYATTTASEDIQYIETTNEWSQW D+LA SMFT+WQ RNA
Sbjct: 301 EDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA 348

[Close]

BLAST of MELO3C031764 vs. NCBI nr
Match: KAA0056561.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 675.2 bits (1741), Expect = 3.2e-190
Identity = 333/362 (91.99%), Postives = 339/362 (93.65%), Query Frame = 0


Query: 34  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 93
           MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 94  TEIVDVEEMVAMFLHVIAHDMKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 153
           TEIVDVEEMVAMFLHV+AHD+KNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 120

Query: 154 P--------------NCLGALDGTYIKVNVPVGDWPTFRTRKGEIATNVLGVCDTKGDFV 213
           P              NCLGALDGTYIKVNVP GD PTFRTRKGEIATNVLGVCDTKGDFV
Sbjct: 121 PVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 180

Query: 214 YVLAGWEGSAANSWILRDAISRENGLQVPKGYYYLCDAGYLNAEGFLAPYRGQRYHLQEW 273
           YVLAGWEGSAA+S ILRDAISRENGLQVPKGYYYLCDAGY NAEGFLAPYRGQRYHLQEW
Sbjct: 181 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 240

Query: 274 RGAANATTNAKEYFNMKHSSARNVIERVFGVLKGRWAILRGKSYYPLQVQCRTILACALL 333
           RGAANA TNAKEYFNMKHSSARNVIER FGVLKGRWAILRGKSYYPLQVQCRTILACALL
Sbjct: 241 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 300

Query: 334 HNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWCDDLAESMFTEWQLR 382
           HNLINR+MTYCDDV+DEDEGDSTYATTTASEDIQYIETTNEWSQW DDLA SMFT+WQ R
Sbjct: 301 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFR 360

[Close]

BLAST of MELO3C031764 vs. NCBI nr
Match: TYK28297.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 673.7 bits (1737), Expect = 9.3e-190
Identity = 333/362 (91.99%), Postives = 338/362 (93.37%), Query Frame = 0


Query: 34  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 93
           MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 94  TEIVDVEEMVAMFLHVIAHDMKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 153
           TEIVDVEEMVAMFLHVIAHDMKN VIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVIAHDMKNHVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 120

Query: 154 P--------------NCLGALDGTYIKVNVPVGDWPTFRTRKGEIATNVLGVCDTKGDFV 213
           P              NCLGALDGTYIKVNVP GD PTFRTRKGEIATNVLGVCDTKGDFV
Sbjct: 121 PVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 180

Query: 214 YVLAGWEGSAANSWILRDAISRENGLQVPKGYYYLCDAGYLNAEGFLAPYRGQRYHLQEW 273
           YVLAGWEGSAA+S ILRDAISRENGLQVPKGYYYLCDAGY NAEGFLAPYRGQRYHLQEW
Sbjct: 181 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 240

Query: 274 RGAANATTNAKEYFNMKHSSARNVIERVFGVLKGRWAILRGKSYYPLQVQCRTILACALL 333
           RGAANA TNAKEYFNMKHSSARNVIER FGVLKGRWAILRGKSYYPLQVQCRTILACALL
Sbjct: 241 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 300

Query: 334 HNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWCDDLAESMFTEWQLR 382
           HNLINR+MTYCDDV+DEDEGDSTYATTTASEDIQYIETTNEWSQW D+LA SMFT+WQ R
Sbjct: 301 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR 360

[Close]

BLAST of MELO3C031764 vs. NCBI nr
Match: KAA0032767.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 673.7 bits (1737), Expect = 9.3e-190
Identity = 334/366 (91.26%), Postives = 341/366 (93.17%), Query Frame = 0


Query: 30  LELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVA 89
           LELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLV RQSTRMDRRTFAILCHLLRNVA
Sbjct: 2   LELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVSRQSTRMDRRTFAILCHLLRNVA 61

Query: 90  GLSSTEIVDVEEMVAMFLHVIAHDMKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELI 149
           GLSSTEIVDVEEMVAMFLHV+AHDMKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELI
Sbjct: 62  GLSSTEIVDVEEMVAMFLHVLAHDMKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELI 121

Query: 150 KRPVP--------------NCLGALDGTYIKVNVPVGDWPTFRTRKGEIATNVLGVCDTK 209
           KRPVP              NCLGALDGTYIKVNVP GD PTFRTRKG+IATNVLGVCDTK
Sbjct: 122 KRPVPVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGKIATNVLGVCDTK 181

Query: 210 GDFVYVLAGWEGSAANSWILRDAISRENGLQVPKGYYYLCDAGYLNAEGFLAPYRGQRYH 269
           GDFVYVLAGWEGSAA+S ILRDAISRENGLQVPKGYYYLCDAGY NAEGFLAPYRGQRYH
Sbjct: 182 GDFVYVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYH 241

Query: 270 LQEWRGAANATTNAKEYFNMKHSSARNVIERVFGVLKGRWAILRGKSYYPLQVQCRTILA 329
           LQEWRGAANA TNAKEYFNMKHSSARNVIER FGVLKGRWAIL GKSYYPLQVQCRTILA
Sbjct: 242 LQEWRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILSGKSYYPLQVQCRTILA 301

Query: 330 CALLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWCDDLAESMFTE 382
           CALLHNLINR+MTYCDDV+DEDEGDSTYATTTASEDIQYIETTNEWSQW D+LA SMFT+
Sbjct: 302 CALLHNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTD 361

[Close]

BLAST of MELO3C031764 vs. ExPASy TrEMBL
Match: A0A5A7V6J9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G00810 PE=3 SV=1)

HSP 1 Score: 682.6 bits (1760), Expect = 9.7e-193
Identity = 331/348 (95.11%), Postives = 339/348 (97.41%), Query Frame = 0


Query: 34  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 93
           MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 94  TEIVDVEEMVAMFLHVIAHDMKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 153
           TEIVDVEEMVAMFLHV+AHD+KNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 120

Query: 154 PNCLGALDGTYIKVNVPVGDWPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAANSW 213
           PNCLGALDGTYIKVNVP GD PTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAA+S 
Sbjct: 121 PNCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSQ 180

Query: 214 ILRDAISRENGLQVPKGYYYLCDAGYLNAEGFLAPYRGQRYHLQEWRGAANATTNAKEYF 273
           ILRDAISRENGLQVPKGYYYLCDAGY NAEGFLAPYRGQRYHLQEWRGAANA TNAKEYF
Sbjct: 181 ILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEWRGAANAPTNAKEYF 240

Query: 274 NMKHSSARNVIERVFGVLKGRWAILRGKSYYPLQVQCRTILACALLHNLINRKMTYCDDV 333
           NMKHSSA+NVIER FGVLKGRWAILRGKSYYPLQVQCRTILACALLHNLINR+MTYCDDV
Sbjct: 241 NMKHSSAKNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALLHNLINREMTYCDDV 300

Query: 334 DDEDEGDSTYATTTASEDIQYIETTNEWSQWCDDLAESMFTEWQLRNA 382
           +DEDEGDSTYATTTASEDIQYI+TTNEWSQW DDLA SMFT+WQ RNA
Sbjct: 301 EDEDEGDSTYATTTASEDIQYIKTTNEWSQWRDDLAASMFTDWQFRNA 348

[Close]

BLAST of MELO3C031764 vs. ExPASy TrEMBL
Match: A0A5A7U6C1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G001970 PE=3 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 3.7e-192
Identity = 331/348 (95.11%), Postives = 339/348 (97.41%), Query Frame = 0


Query: 34  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 93
           MNNNKRLPHTPPDTRHRIRELAYFRMI+ESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIYESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 94  TEIVDVEEMVAMFLHVIAHDMKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 153
           TEIVDVEEMVAMFLHV+AHD+KNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 120

Query: 154 PNCLGALDGTYIKVNVPVGDWPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAANSW 213
           PNCLGALDGTYIKVNVP GD PTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAA+S 
Sbjct: 121 PNCLGALDGTYIKVNVPTGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSR 180

Query: 214 ILRDAISRENGLQVPKGYYYLCDAGYLNAEGFLAPYRGQRYHLQEWRGAANATTNAKEYF 273
           ILRDAISRENGLQVPKGYYYLCDAGY NAEGFLAPYRGQRYHLQEWRGAANA TNAKEYF
Sbjct: 181 ILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEWRGAANAPTNAKEYF 240

Query: 274 NMKHSSARNVIERVFGVLKGRWAILRGKSYYPLQVQCRTILACALLHNLINRKMTYCDDV 333
           NMKHSSARNVIER FGVLKGRWAILRGKSYYPLQVQCRTILACALLHNLINR+MTYCDDV
Sbjct: 241 NMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALLHNLINREMTYCDDV 300

Query: 334 DDEDEGDSTYATTTASEDIQYIETTNEWSQWCDDLAESMFTEWQLRNA 382
           +DEDEGDSTYATTTASEDIQYIETTNEWSQW D+LA SMFT+WQ RNA
Sbjct: 301 EDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFRNA 348

[Close]

BLAST of MELO3C031764 vs. ExPASy TrEMBL
Match: A0A5A7UST8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G00660 PE=3 SV=1)

HSP 1 Score: 675.2 bits (1741), Expect = 1.5e-190
Identity = 333/362 (91.99%), Postives = 339/362 (93.65%), Query Frame = 0


Query: 34  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 93
           MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 94  TEIVDVEEMVAMFLHVIAHDMKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 153
           TEIVDVEEMVAMFLHV+AHD+KNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 120

Query: 154 P--------------NCLGALDGTYIKVNVPVGDWPTFRTRKGEIATNVLGVCDTKGDFV 213
           P              NCLGALDGTYIKVNVP GD PTFRTRKGEIATNVLGVCDTKGDFV
Sbjct: 121 PVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 180

Query: 214 YVLAGWEGSAANSWILRDAISRENGLQVPKGYYYLCDAGYLNAEGFLAPYRGQRYHLQEW 273
           YVLAGWEGSAA+S ILRDAISRENGLQVPKGYYYLCDAGY NAEGFLAPYRGQRYHLQEW
Sbjct: 181 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 240

Query: 274 RGAANATTNAKEYFNMKHSSARNVIERVFGVLKGRWAILRGKSYYPLQVQCRTILACALL 333
           RGAANA TNAKEYFNMKHSSARNVIER FGVLKGRWAILRGKSYYPLQVQCRTILACALL
Sbjct: 241 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 300

Query: 334 HNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWCDDLAESMFTEWQLR 382
           HNLINR+MTYCDDV+DEDEGDSTYATTTASEDIQYIETTNEWSQW DDLA SMFT+WQ R
Sbjct: 301 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFR 360

[Close]

BLAST of MELO3C031764 vs. ExPASy TrEMBL
Match: A0A5A7STY2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold708G00110 PE=3 SV=1)

HSP 1 Score: 673.7 bits (1737), Expect = 4.5e-190
Identity = 334/366 (91.26%), Postives = 341/366 (93.17%), Query Frame = 0


Query: 30  LELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVA 89
           LELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLV RQSTRMDRRTFAILCHLLRNVA
Sbjct: 2   LELLMNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVSRQSTRMDRRTFAILCHLLRNVA 61

Query: 90  GLSSTEIVDVEEMVAMFLHVIAHDMKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELI 149
           GLSSTEIVDVEEMVAMFLHV+AHDMKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELI
Sbjct: 62  GLSSTEIVDVEEMVAMFLHVLAHDMKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELI 121

Query: 150 KRPVP--------------NCLGALDGTYIKVNVPVGDWPTFRTRKGEIATNVLGVCDTK 209
           KRPVP              NCLGALDGTYIKVNVP GD PTFRTRKG+IATNVLGVCDTK
Sbjct: 122 KRPVPVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGKIATNVLGVCDTK 181

Query: 210 GDFVYVLAGWEGSAANSWILRDAISRENGLQVPKGYYYLCDAGYLNAEGFLAPYRGQRYH 269
           GDFVYVLAGWEGSAA+S ILRDAISRENGLQVPKGYYYLCDAGY NAEGFLAPYRGQRYH
Sbjct: 182 GDFVYVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYH 241

Query: 270 LQEWRGAANATTNAKEYFNMKHSSARNVIERVFGVLKGRWAILRGKSYYPLQVQCRTILA 329
           LQEWRGAANA TNAKEYFNMKHSSARNVIER FGVLKGRWAIL GKSYYPLQVQCRTILA
Sbjct: 242 LQEWRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILSGKSYYPLQVQCRTILA 301

Query: 330 CALLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWCDDLAESMFTE 382
           CALLHNLINR+MTYCDDV+DEDEGDSTYATTTASEDIQYIETTNEWSQW D+LA SMFT+
Sbjct: 302 CALLHNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTD 361

[Close]

BLAST of MELO3C031764 vs. ExPASy TrEMBL
Match: A0A5D3DWU0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001160 PE=3 SV=1)

HSP 1 Score: 673.7 bits (1737), Expect = 4.5e-190
Identity = 333/362 (91.99%), Postives = 338/362 (93.37%), Query Frame = 0


Query: 34  MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 93
           MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS
Sbjct: 1   MNNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSS 60

Query: 94  TEIVDVEEMVAMFLHVIAHDMKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 153
           TEIVDVEEMVAMFLHVIAHDMKN VIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV
Sbjct: 61  TEIVDVEEMVAMFLHVIAHDMKNHVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPV 120

Query: 154 P--------------NCLGALDGTYIKVNVPVGDWPTFRTRKGEIATNVLGVCDTKGDFV 213
           P              NCLGALDGTYIKVNVP GD PTFRTRKGEIATNVLGVCDTKGDFV
Sbjct: 121 PVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFV 180

Query: 214 YVLAGWEGSAANSWILRDAISRENGLQVPKGYYYLCDAGYLNAEGFLAPYRGQRYHLQEW 273
           YVLAGWEGSAA+S ILRDAISRENGLQVPKGYYYLCDAGY NAEGFLAPYRGQRYHLQEW
Sbjct: 181 YVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEW 240

Query: 274 RGAANATTNAKEYFNMKHSSARNVIERVFGVLKGRWAILRGKSYYPLQVQCRTILACALL 333
           RGAANA TNAKEYFNMKHSSARNVIER FGVLKGRWAILRGKSYYPLQVQCRTILACALL
Sbjct: 241 RGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACALL 300

Query: 334 HNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWCDDLAESMFTEWQLR 382
           HNLINR+MTYCDDV+DEDEGDSTYATTTASEDIQYIETTNEWSQW D+LA SMFT+WQ R
Sbjct: 301 HNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQFR 360

[Close]

BLAST of MELO3C031764 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 185.3 bits (469), Expect = 9.4e-47
Identity = 104/280 (37.14%), Postives = 150/280 (53.57%), Query Frame = 0


Query: 57  FRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVIAHDMKN 116
           +++++  +  C ++ RMD+  F  LC LL+    L  T  + +E  +A+FL +I H+++ 
Sbjct: 32  YQILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRT 91

Query: 117 RVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPN-------------CLGALDGT 176
           R +Q  F  SGET+SRHFN VL AV+ + ++   +P  N             C+G +D  
Sbjct: 92  RAVQELFCYSGETISRHFNNVLNAVIAISKDFF-QPNSNSDTLENDDPYFKDCVGVVDSF 151

Query: 177 YIKVNVPVGDWPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAANSWILRDAISREN 236
           +I V V V +   FR   G +  NVL        F YVLAGWEGSA++  +L  A++R N
Sbjct: 152 HIPVMVGVDEQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAALTRRN 211

Query: 237 GLQVPKGYYYLCDAGYLNAEGFLAPYRGQRYHLQEWRGAANATTNAKEYFNMKHSSARNV 296
            LQVP+G YY+ D  Y N  GF+APY G          + N+   AKE FN +H      
Sbjct: 212 KLQVPQGKYYIVDNKYPNLPGFIAPYHGV---------STNSREEAKEMFNERHKLLHRA 271

Query: 297 IERVFGVLKGRWAILRGKSYYPLQVQCRTILACALLHNLI 324
           I R FG LK R+ IL     YPLQ Q + ++A   LHN +
Sbjct: 272 IHRTFGALKERFPILLSAPPYPLQTQVKLVIAACALHNYV 301

[Close]

BLAST of MELO3C031764 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 123.6 bits (309), Expect = 3.3e-28
Identity = 84/265 (31.70%), Postives = 124/265 (46.79%), Query Frame = 0


Query: 57  FRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVIAHDMKN 116
           +R + +    C Q  RM    F  LC++L+    L  T  + +EE VAMFL +  H+   
Sbjct: 56  WRRLQQDAAACLQLLRMSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVY 115

Query: 117 RVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRP-------VPNCL------------ 176
           R +   F R+ ETV R F  VL A   L  + I+ P       +P  L            
Sbjct: 116 RDVGLRFGRNQETVQRKFREVLTATELLACDYIRTPTRQELYRIPERLQVDQRYWPYFSG 175

Query: 177 --GALDGTYIKVNVPVGDWPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAANSWIL 236
             GA+DGT++ V V       +  R    + N++ +CD K  F Y+  G  GS  ++ +L
Sbjct: 176 FVGAMDGTHVCVKVKPDLQGMYWNRHDNASLNIMAICDLKMLFTYIWNGAPGSCYDTAVL 235

Query: 237 RDAISRENGLQVPKG-YYYLCDAGYLNAEGFLAPYRGQ-----RYHLQEWRGAANATTNA 295
           + A   ++   +P    YYL D+GY N +G LAPYR       RYH+ ++        N 
Sbjct: 236 QIAQQSDSEFPLPPSEKYYLVDSGYPNKQGLLAPYRSSRNRVVRYHMSQFYYGPR-PRNK 295

[Close]

BLAST of MELO3C031764 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 119.8 bits (299), Expect = 4.8e-27
Identity = 62/141 (43.97%), Postives = 83/141 (58.87%), Query Frame = 0


Query: 198 FVYVLAGWEGSAANSWILRDAISRENGLQVPKGYYYLCDAGYLNAEGFLAPYRGQRYHLQ 257
           F+YVL+GWEGSA +S +L DA+ +          +YL D G+ N   FLAP+RG RYHLQ
Sbjct: 25  FIYVLSGWEGSAHDSRVLSDALRK----------FYLVDCGFANRLNFLAPFRGVRYHLQ 84

Query: 258 EWRGAANATTNAKEYFNMKHSSARNVIERVFGVLKGRWAILRGKSYYPLQVQCRTILACA 317
           E+ G         E FN++H S RNVIER+FG+ K R+AI +    +  + Q   +L CA
Sbjct: 85  EFAGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVLTCA 144

Query: 318 LLHNLINRKMTYCDDVDDEDE 339
            LHN + RK    D+ D  DE
Sbjct: 145 ALHNFL-RKECRSDEADFPDE 154

[Close]

BLAST of MELO3C031764 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 107.1 bits (266), Expect = 3.2e-23
Identity = 73/225 (32.44%), Postives = 105/225 (46.67%), Query Frame = 0


Query: 60  IHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVIAHDMKNRVI 119
           I+ +++ C+   RM    F  LC +L    GL S+  + ++E VA+FL + A +   R I
Sbjct: 17  IYSNEVSCQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDI 76

Query: 120 QREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPNCLGALDGTYIKVNVPVGDWPTFRT 179
              F  + ET+ R F+ VL A+ RL  E I+   P  +  L     ++      WP    
Sbjct: 77  ALRFGHAQETIWRKFHDVLKAMERLAVEYIR---PRKVEELRAISNRLQDDTRYWPFLMD 136

Query: 180 RKGEIATNVLGVCDTKGDFVYVLAGWEGSAANSWILRDAISRENGLQV-PKGYYYLCDAG 239
             G  + NVL +CD    F Y   G  GS  ++ +L  AIS +    V P   YYL D+G
Sbjct: 137 LLGIASFNVLAICDLDMLFTYCFVGMAGSTHDARVLSAAISDDPLFHVPPDSKYYLVDSG 196

Query: 240 YLNAEGFLAPYRGQRYHLQEWRGAANATTNAKEYFNMKHSSARNV 284
           Y N  G+LAPYR +    Q+       T N  E  N+K     NV
Sbjct: 197 YANKRGYLAPYRREHREAQDIISNNFLTVNLFETHNIKDYDFDNV 238

[Close]

BLAST of MELO3C031764 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 78.6 bits (192), Expect = 1.2e-14
Identity = 46/123 (37.40%), Postives = 70/123 (56.91%), Query Frame = 0


Query: 155 NCLGALDGTYIKVNVPVGDWPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAANSWI 214
           +C+GA+D T+I   V     P+FR RKG+I+ N+L  C+   +F+YVL+GWEGSA +S +
Sbjct: 24  DCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEFMYVLSGWEGSAHDSKV 83

Query: 215 LRDAISR-ENGLQVP---KGYYYLCDAGYLNAEGFLAPYRGQRYHLQEWRG--AANATTN 272
           L DA++R  N L VP   +    + +    N +  L     QR +  +WR   A+N   N
Sbjct: 84  LNDALTRNSNRLPVPEEDESAEEVVEEVNDNNDEVLTTQDQQREYANQWRETIASNMWNN 143

The following BLAST results are available for this feature:

BLAST of MELO3C031764 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062587.1	2.0e-192	95.11	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0051443.1	7.6e-192	95.11	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0056561.1	3.2e-190	91.99	retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK28297.1	9.3e-190	91.99	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0032767.1	9.3e-190	91.26	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C031764 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C031764 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V6J9	9.7e-193	95.11	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7U6C1	3.7e-192	95.11	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UST8	1.5e-190	91.99	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7STY2	4.5e-190	91.26	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DWU0	4.5e-190	91.99	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C031764 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41980.1	9.4e-47	37.14	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT1G43722.1	3.3e-28	31.70	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G35695.1	4.8e-27	43.97	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT5G28730.1	3.2e-23	32.44	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G28950.1	1.2e-14	37.40	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027806	Harbinger transposase-derived nuclease domain	PFAM	PF13359	DDE_Tnp_4	coord: 160..321 e-value: 5.8E-23 score: 81.3
None	No IPR available	PANTHER	PTHR22930:SF211	NUCLEASE HARBI1-RELATED	coord: 35..377
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 35..377

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031764.1	MELO3C031764.1	mRNA