MELO3C031757 (gene) Melon (DHL92) v4

Overview
NameMELO3C031757
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionAcetyl-CoA carboxylase 1-like
Locationchr06: 15562058 .. 15562946 (-)
RNA-Seq ExpressionMELO3C031757
SyntenyMELO3C031757
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGATTAAATGATGCTTCAAATGGATTGTTGGTTGTTGATTGTGTATTTTGTGTTGATATTTTTGTTATGAAATACAATGGTAGAAAGGGGAAGACCTTTAATAACACTAGAGTGAAGCGGTCGATTAAAGTGCCCACGATTAGTAACAAGCTAGCACATATGATGATTATTCATGGAGGAAATATGGCCAAAAGTCAATCAAGGGTTCTCCACACCCAAGGTATACAAATATGATTGCTTTACTTTTCAGCTTATTGTGTTGATGTTGCTTATTTCTTTATAGATTGATATTGGTTTTCATAATAATGTTATGTAAAAAAATGTTGATTATTCATTTTGCGGGCAATATTATGAGCTAATCAATTACAAGAATTCATAGGTTGCCACATAAAATGTTTTTCTTTTCTATTTGGGAAAAGGATTGTATATGATTGCATCTATGGAAAATTTCTAATATTAGATTAAAGAGATTTAGGAAAGCCTGATGGATGGGGTAGACTGAAGAGAGTTATGTGGATTGTGGTATTGATATAAAATCTTGAGAACTTTTCATCCTTCTCTGCAATTTTAGTGCTTCAAACAGCTTTGTTATTCTATATAAATGGTTTATTTGGATATTGTTTGTAGATAATTGAAGTCATATCGGGTTGAAAGCTAAGCGATTGTGCAGAGATGGCTAAGCGACCGTTGAAAATTGAAGACTGAGAAGGCGTTTAGGATTTTTAATTATTTAATTCTTGTATTAGGATCTTTTTTCATGTATTGTTGTAGAATTTATATATAAACATAATATTAAGATTTTATTTTGTGTATTCAAATGTAAAAGACAAATATTATAGTTTCTAAAATAATATGAATTTCATTGATTTCTTGACGTGTGAAAAACA

mRNA sequence

AAAGATTAAATGATGCTTCAAATGGATTGTTGGTTGTTGATTGTGTATTTTGTGTTGATATTTTTGTTATGAAATACAATGGTAGAAAGGGGAAGACCTTTAATAACACTAGAGTGAAGCGGTCGATTAAAGTGCCCACGATTAGTAACAAGCTAGCACATATGATGATTATTCATGGAGGAAATATGGCCAAAAGTCAATCAAGGGTTCTCCACACCCAAGGAAAGCCTGATGGATGGGGTAGACTGAAGAGAGTTATGTGGATTGTGATAATTGAAGTCATATCGGGTTGAAAGCTAAGCGATTGTGCAGAGATGGCTAAGCGACCGTTGAAAATTGAAGACTGAGAAGGCGTTTAGGATTTTTAATTATTTAATTCTTGTATTAGGATCTTTTTTCATGTATTGTTGTAGAATTTATATATAAACATAATATTAAGATTTTATTTTGTGTATTCAAATGTAAAAGACAAATATTATAGTTTCTAAAATAATATGAATTTCATTGATTTCTTGACGTGTGAAAAACA

Coding sequence (CDS)

ATGAAATACAATGGTAGAAAGGGGAAGACCTTTAATAACACTAGAGTGAAGCGGTCGATTAAAGTGCCCACGATTAGTAACAAGCTAGCACATATGATGATTATTCATGGAGGAAATATGGCCAAAAGTCAATCAAGGGTTCTCCACACCCAAGGAAAGCCTGATGGATGGGGTAGACTGAAGAGAGTTATGTGGATTGTGATAATTGAAGTCATATCGGGTTGA

Protein sequence

MKYNGRKGKTFNNTRVKRSIKVPTISNKLAHMMIIHGGNMAKSQSRVLHTQGKPDGWGRLKRVMWIVIIEVISG
Homology
[Close]
BLAST of MELO3C031757 vs. NCBI nr
Match: KAA0032276.1 (NAD-dependent protein deacylase SRT2 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 81.3 bits (199), Expect = 4.0e-12
Identity = 42/51 (82.35%), Postives = 44/51 (86.27%), Query Frame = 0 

Query: 2   KYNGRKGKTFNNTRVKRSIKVPTISNKLAHMMIIHGGNMAKSQSRVLHTQG 53
           +Y   KGK FNNTRVKRSIKVPTISNKLA MMIIH GNMAKSQSR+L TQG
Sbjct: 67  RYFCGKGKAFNNTRVKRSIKVPTISNKLADMMIIHRGNMAKSQSRLLRTQG 117

[Close]
BLAST of MELO3C031757 vs. NCBI nr
Match: KAA0065344.1 (ABC transporter I family member 6 [Cucumis melo var. makuwa])

HSP 1 Score: 80.5 bits (197), Expect = 6.8e-12
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 0 

Query: 7   KGKTFNNTRVKRSIKVPTISNKLAHMMIIHGGNMAKSQSRVLHTQG 53
           KGK FNNTRVKRSIKVPTISNKLA MMII+ GNM KSQSR+LHTQG
Sbjct: 420 KGKAFNNTRVKRSIKVPTISNKLADMMIIYRGNMTKSQSRLLHTQG 465

[Close]
BLAST of MELO3C031757 vs. NCBI nr
Match: KAA0042275.1 (transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 77.8 bits (190), Expect = 4.4e-11
Identity = 42/50 (84.00%), Postives = 43/50 (86.00%), Query Frame = 0 

Query: 6   RKGKTFNNT----RVKRSIKVPTISNKLAHMMIIHGGNMAKSQSRVLHTQ 52
           RK K FNNT    RVKRSIKVPTISN+LA MMIIHGGNMAKSQSRVLHTQ
Sbjct: 143 RKEKAFNNTRVKHRVKRSIKVPTISNRLADMMIIHGGNMAKSQSRVLHTQ 192

[Close]
BLAST of MELO3C031757 vs. NCBI nr
Match: KAA0045996.1 (acetyl-CoA carboxylase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 75.9 bits (185), Expect = 1.7e-10
Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 0 

Query: 7   KGKTFNNTRVKRSIKVPTISNKLAHMMIIHGGNMAKSQSRV 48
           KGK FNNTRVKRSIKVPTISNKLA MMIIHGGNMAKSQS++
Sbjct: 203 KGKAFNNTRVKRSIKVPTISNKLADMMIIHGGNMAKSQSKI 243

[Close]
BLAST of MELO3C031757 vs. NCBI nr
Match: KAA0042207.1 (triacylglycerol lipase 1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 74.3 bits (181), Expect = 4.8e-10
Identity = 40/49 (81.63%), Postives = 41/49 (83.67%), Query Frame = 0 

Query: 7   KGKTFNNTRVKR----SIKVPTISNKLAHMMIIHGGNMAKSQSRVLHTQ 52
           KGK FNNTRVK     SIKVPTISNKLA MMIIHGGNMAKSQS+VL TQ
Sbjct: 302 KGKAFNNTRVKHRVKWSIKVPTISNKLADMMIIHGGNMAKSQSKVLRTQ 350

[Close]
BLAST of MELO3C031757 vs. ExPASy TrEMBL
Match: A0A5A7SQI0 (NAD-dependent protein deacylase SRT2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G001160 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.9e-12
Identity = 42/51 (82.35%), Postives = 44/51 (86.27%), Query Frame = 0 

Query: 2   KYNGRKGKTFNNTRVKRSIKVPTISNKLAHMMIIHGGNMAKSQSRVLHTQG 53
           +Y   KGK FNNTRVKRSIKVPTISNKLA MMIIH GNMAKSQSR+L TQG
Sbjct: 67  RYFCGKGKAFNNTRVKRSIKVPTISNKLADMMIIHRGNMAKSQSRLLRTQG 117

[Close]
BLAST of MELO3C031757 vs. ExPASy TrEMBL
Match: A0A5A7VDI7 (ABC transporter I family member 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold301G00160 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.3e-12
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 0 

Query: 7   KGKTFNNTRVKRSIKVPTISNKLAHMMIIHGGNMAKSQSRVLHTQG 53
           KGK FNNTRVKRSIKVPTISNKLA MMII+ GNM KSQSR+LHTQG
Sbjct: 420 KGKAFNNTRVKRSIKVPTISNKLADMMIIYRGNMTKSQSRLLHTQG 465

[Close]
BLAST of MELO3C031757 vs. ExPASy TrEMBL
Match: A0A5A7TLF6 (Transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00590 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.1e-11
Identity = 42/50 (84.00%), Postives = 43/50 (86.00%), Query Frame = 0 

Query: 6   RKGKTFNNT----RVKRSIKVPTISNKLAHMMIIHGGNMAKSQSRVLHTQ 52
           RK K FNNT    RVKRSIKVPTISN+LA MMIIHGGNMAKSQSRVLHTQ
Sbjct: 143 RKEKAFNNTRVKHRVKRSIKVPTISNRLADMMIIHGGNMAKSQSRVLHTQ 192

[Close]
BLAST of MELO3C031757 vs. ExPASy TrEMBL
Match: A0A5A7TV25 (Acetyl-CoA carboxylase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005560 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 8.1e-11
Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 0 

Query: 7   KGKTFNNTRVKRSIKVPTISNKLAHMMIIHGGNMAKSQSRV 48
           KGK FNNTRVKRSIKVPTISNKLA MMIIHGGNMAKSQS++
Sbjct: 203 KGKAFNNTRVKRSIKVPTISNKLADMMIIHGGNMAKSQSKI 243

[Close]
BLAST of MELO3C031757 vs. ExPASy TrEMBL
Match: A0A5A7TKJ7 (Triacylglycerol lipase 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G007180 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.3e-10
Identity = 40/49 (81.63%), Postives = 41/49 (83.67%), Query Frame = 0 

Query: 7   KGKTFNNTRVKR----SIKVPTISNKLAHMMIIHGGNMAKSQSRVLHTQ 52
           KGK FNNTRVK     SIKVPTISNKLA MMIIHGGNMAKSQS+VL TQ
Sbjct: 302 KGKAFNNTRVKHRVKWSIKVPTISNKLADMMIIHGGNMAKSQSKVLRTQ 350

The following BLAST results are available for this feature:
BLAST of MELO3C031757 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0032276.14.0e-1282.35NAD-dependent protein deacylase SRT2 isoform X2 [Cucumis melo var. makuwa][more]
KAA0065344.16.8e-1286.96ABC transporter I family member 6 [Cucumis melo var. makuwa][more]
KAA0042275.14.4e-1184.00transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 [Cucumis melo var. ma... [more]
KAA0045996.11.7e-1090.24acetyl-CoA carboxylase 1-like [Cucumis melo var. makuwa][more]
KAA0042207.14.8e-1081.63triacylglycerol lipase 1 isoform X2 [Cucumis melo var. makuwa][more]
BLAST of MELO3C031757 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C031757 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SQI01.9e-1282.35NAD-dependent protein deacylase SRT2 isoform X2 OS=Cucumis melo var. makuwa OX=1... [more]
A0A5A7VDI73.3e-1286.96ABC transporter I family member 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7TLF62.1e-1184.00Transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 OS=Cucumis melo var. ... [more]
A0A5A7TV258.1e-1190.24Acetyl-CoA carboxylase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A5A7TKJ72.3e-1081.63Triacylglycerol lipase 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
BLAST of MELO3C031757 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031757.1MELO3C031757.1mRNA