MELO3C031723 (gene) Melon (DHL92) v4

Overview


Name	MELO3C031723
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Transpos_assoc domain-containing protein
Location	chr06: 13402872 .. 13403742 (-)
RNA-Seq Expression	MELO3C031723
Synteny	MELO3C031723

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGTTTTGGCTATCCTGCAGTTATAGTAGCCTTTAGTTCAATTCTAGTAGTTTATTTTCTTAGTAGTTTTGAATAACATTGTTGTTGATTTGGAATGACTATTATGCAGTTATAGTAGCCTTTTTTTTATTTTGAATTTGTTTGTATTTCTAAGGGTTTGAAAGGGTGGTAATAGGGTAGCTTGTAAGGTAGCATTGTTAGAACGGGTGGGTAGGATGCAAAGATTAAAATTGTTTGTGGTTAATTAGGTTGTGGTGACTATCTTGCAGTTATGATAGCCTCTATAGTTTGAAGTTAGTTTTAGTGAACAATTTTGGGAGATTGTATATTTAGGGGAGTAAGTTTAGGATATGAGAGGAAAATGATATGCTTCTAATCAGACCTATTTATGTTTTAGGGACTTAAAATGGACAAGGGTCGGATGAAACTTAGGAATAAGTTTTTTTTTTAGTATAGAGAGAGAATGGCTCAATTTCTAGACGTTGTCAAGGTTCACGTTGATGCCAATGGACGAATAAGGTGTCCATGCAAGAGATGTATGAACTCAAATTGGAACTCACTAAAGGGTGTGGAACGACATCTACAGACTATTGAAATTATATCCCCCTACTACATAGAATGGGTGTTCATAGAGAGTCGATTAGCTTTAGAGGTACAAAAAACTTAAAGAAAAGAACTAGTAGTAACCCTTTTGATAAAGGAACTAGTAGTATGCAGTTTGATGAAAAAGATAATATATTCAGTATGCTGAATAATTTACAAGTCCCGAACACGAAGAGGAAATGAAGGAAAGTCGTTTGGAGGATGAAATGTCGAGGAATATTGGGATAGATATAAATGAAGATACAACAAACATATTTCAAGGCTTA

mRNA sequence

ATTTGTTTTGGCTATCCTGCAGTTATAGGACTTAAAATGGACAAGGGTCGGATGAAACTTAGGAATAAGTTTTTTTTTTAGTATAGAGAGAGAATGGCTCAATTTCTAGACGTTGTCAAGGTTCACGTTGATGCCAATGGACGAATAAGGTGTCCATGCAAGAGATGTATGAACTCAAATTGGAACTCACTAAAGGGTGTGGAACGACATCTACAGACTATTGAAATTATATCCCCCTACTACATAGAATGGGTGTTCATAGAGAGTCGATTAGCTTTAGAGGTACAAAAAACTTAAAGAAAAGAACTAGTAGTAACCCTTTTGATAAAGGAACTAGTAGTATGCAGTTTGATGAAAAAGATAATATATTCAGTATGCTGAATAATTTACAAGTCCCGAACACGAAGAGGAAATGAAGGAAAGTCGTTTGGAGGATGAAATGTCGAGGAATATTGGGATAGATATAAATGAAGATACAACAAACATATTTCAAGGCTTA

Coding sequence (CDS)

ATGGCTCAATTTCTAGACGTTGTCAAGGTTCACGTTGATGCCAATGGACGAATAAGGTGTCCATGCAAGAGATGTATGAACTCAAATTGGAACTCACTAAAGGGTGTGGAACGACATCTACAGACTATTGAAATTATATCCCCCTACTACATAGAATGGGTGTTCATAGAGAGTCGATTAGCTTTAGAGGTACAAAAAACTTAA

Protein sequence

MAQFLDVVKVHVDANGRIRCPCKRCMNSNWNSLKGVERHLQTIEIISPYYIEWVFIESRLALEVQKT

Homology

[Close]

BLAST of MELO3C031723 vs. NCBI nr
Match: KAA0056368.1 (uncharacterized protein E6C27_scaffold186G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 90.1 bits (222), Expect = 7.7e-15
Identity = 39/55 (70.91%), Postives = 46/55 (83.64%), Query Frame = 0


Query: 1  MAQFLDVVKVHVDANGRIRCPCKRCMNSNWNSLKGVERHLQTIEIISPYYIEWVF 56
          + QFL+  K HVDA GR+RCPCKRC+N NW+SL+GVERHL TI  ISPYYIEWV+
Sbjct: 20 VTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIG-ISPYYIEWVY 73

[Close]

BLAST of MELO3C031723 vs. NCBI nr
Match: TYK18968.1 (uncharacterized protein E5676_scaffold418G00580 [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 2.9e-14
Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 1   MAQFLDVVKVHVDANGRIRCPCKRCMNSNWNSLKGVERHLQTIEIISPYYIEWVF 56
           + QFL+  K HVDA GR+RCPCKRC+N NW+SL+GVERHL TI  ISPYY EWV+
Sbjct: 94  VTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIG-ISPYYTEWVY 147

[Close]

BLAST of MELO3C031723 vs. NCBI nr
Match: TYK16353.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 2.9e-14
Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 1  MAQFLDVVKVHVDANGRIRCPCKRCMNSNWNSLKGVERHLQTIEIISPYYIEWVF 56
          + QFL+  K HVDA GR+RCPCKRC+N NW+SL+GVERHL TI  ISPYY EWV+
Sbjct: 20 VTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIG-ISPYYTEWVY 73

[Close]

BLAST of MELO3C031723 vs. NCBI nr
Match: TYJ95864.1 (uncharacterized protein E5676_scaffold110G001580 [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 2.9e-14
Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 1   MAQFLDVVKVHVDANGRIRCPCKRCMNSNWNSLKGVERHLQTIEIISPYYIEWVF 56
           + QFL+  K HVDA GR+RCPCKRC+N NW+SL+GVERHL TI  ISPYY EWV+
Sbjct: 71  VTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIG-ISPYYTEWVY 124

[Close]

BLAST of MELO3C031723 vs. NCBI nr
Match: TYK28867.1 (uncharacterized protein E5676_scaffold381G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 2.9e-14
Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 1   MAQFLDVVKVHVDANGRIRCPCKRCMNSNWNSLKGVERHLQTIEIISPYYIEWVF 56
           + QFL+  K HVDA GR+RCPCKRC+N NW+SL+GVERHL TI  ISPYY EWV+
Sbjct: 149 VTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIG-ISPYYTEWVY 202

[Close]

BLAST of MELO3C031723 vs. ExPASy TrEMBL
Match: A0A5A7UMP4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G001050 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.7e-15
Identity = 39/55 (70.91%), Postives = 46/55 (83.64%), Query Frame = 0


Query: 1  MAQFLDVVKVHVDANGRIRCPCKRCMNSNWNSLKGVERHLQTIEIISPYYIEWVF 56
          + QFL+  K HVDA GR+RCPCKRC+N NW+SL+GVERHL TI  ISPYYIEWV+
Sbjct: 20 VTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIG-ISPYYIEWVY 73

[Close]

BLAST of MELO3C031723 vs. ExPASy TrEMBL
Match: A0A5D3D5X7 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00580 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.4e-14
Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 1   MAQFLDVVKVHVDANGRIRCPCKRCMNSNWNSLKGVERHLQTIEIISPYYIEWVF 56
           + QFL+  K HVDA GR+RCPCKRC+N NW+SL+GVERHL TI  ISPYY EWV+
Sbjct: 94  VTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIG-ISPYYTEWVY 147

[Close]

BLAST of MELO3C031723 vs. ExPASy TrEMBL
Match: A0A5D3BP89 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00540 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.4e-14
Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 1   MAQFLDVVKVHVDANGRIRCPCKRCMNSNWNSLKGVERHLQTIEIISPYYIEWVF 56
           + QFL+  K HVDA GR+RCPCKRC+N NW+SL+GVERHL TI  ISPYY EWV+
Sbjct: 77  VTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIG-ISPYYTEWVY 130

[Close]

BLAST of MELO3C031723 vs. ExPASy TrEMBL
Match: A0A5D3CWU5 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001370 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.4e-14
Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 1  MAQFLDVVKVHVDANGRIRCPCKRCMNSNWNSLKGVERHLQTIEIISPYYIEWVF 56
          + QFL+  K HVDA GR+RCPCKRC+N NW+SL+GVERHL TI  ISPYY EWV+
Sbjct: 20 VTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIG-ISPYYTEWVY 73

[Close]

BLAST of MELO3C031723 vs. ExPASy TrEMBL
Match: A0A5A7UL57 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G00420 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.4e-14
Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 1   MAQFLDVVKVHVDANGRIRCPCKRCMNSNWNSLKGVERHLQTIEIISPYYIEWVF 56
           + QFL+  K HVDA GR+RCPCKRC+N NW+SL+GVERHL TI  ISPYY EWV+
Sbjct: 233 VTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIG-ISPYYTEWVY 286

The following BLAST results are available for this feature:

BLAST of MELO3C031723 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056368.1	7.7e-15	70.91	uncharacterized protein E6C27_scaffold186G001050 [Cucumis melo var. makuwa]	[more]
TYK18968.1	2.9e-14	69.09	uncharacterized protein E5676_scaffold418G00580 [Cucumis melo var. makuwa]	[more]
TYK16353.1	2.9e-14	69.09	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYJ95864.1	2.9e-14	69.09	uncharacterized protein E5676_scaffold110G001580 [Cucumis melo var. makuwa]	[more]
TYK28867.1	2.9e-14	69.09	uncharacterized protein E5676_scaffold381G00070 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C031723 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C031723 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UMP4	3.7e-15	70.91	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3D5X7	1.4e-14	69.09	Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3BP89	1.4e-14	69.09	Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3CWU5	1.4e-14	69.09	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7UL57	1.4e-14	69.09	Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of MELO3C031723 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029480	Transposase-associated domain	PFAM	PF13963	Transpos_assoc	coord: 2..54 e-value: 2.4E-9 score: 37.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031723.1	MELO3C031723.1	mRNA