MELO3C031262 (gene) Melon (DHL92) v4

Overview


Name	MELO3C031262
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr05: 21946133 .. 21946400 (+)
RNA-Seq Expression	MELO3C031262
Synteny	MELO3C031262

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGACCAGGAGATTTGAAAAAGGATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTTTCTTAACGCCTTCTTTTTTCTTCTCATCGGAGTTATTTCACAAAGACTTGCCATGGTAAGGAAGAAGGGGGGAACAAGCACACTTGGAGAGCGCAGTACAACGGAGAGTTGTATGCTGCGTTCGGGAAGGATGAATCGCTCCCGAAAAGGAATCTATTGATTCTCTCCCAATTGGTTGGACCGTAGGTGCGATGATTTACTTCACGGGCGAG

mRNA sequence

GGACCAGGAGATTTGAAAAAGGATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTTTCTTAACGCCTTCTTTTTTCTTCTCATCGGAGTTATTTCACAAAGACTTGCCATGGTAAGGAAGAAGGGGGGAACAAGCACACTTGGAGAGCGCAGTACAACGGAGAGTTGTATGCTGCGTTCGGGAAGGATGAATCGCTCCCGAAAAGGAATCTATTGATTCTCTCCCAATTGGTTGGACCGTAGGTGCGATGATTTACTTCACGGGCGAG

Coding sequence (CDS)

GGACCAGGAGATTTGAAAAAGGATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTTTCTTAACGCCTTCTTTTTTCTTCTCATCGGAGTTATTTCACAAAGACTTGCCATGGTAAGGAAGAAGGGGGGAACAAGCACACTTGGAGAGCGCAGTACAACGGAGAGTTGTATGCTGCGTTCGGGAAGGATGAATCGCTCCCGAAAAGGAATCTATTGA

Protein sequence

GPGDLKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY

Homology

[Close]

BLAST of MELO3C031262 vs. NCBI nr
Match: PQP98137.1 (hypothetical protein Pyn_20560 [Prunus yedoensis var. nudiflora] >TQD86668.1 hypothetical protein C1H46_027794 [Malus baccata])

HSP 1 Score: 130.6 bits (327), Expect = 5.5e-27
Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 5  LKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCMLRSGRMN 64
          LKKDLRVSRVGPGG LNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCMLRSGRMN
Sbjct: 5  LKKDLRVSRVGPGGSLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCMLRSGRMN 64

Query: 65 RSRKGIY 72
          RSRKGIY
Sbjct: 65 RSRKGIY 71

[Close]

BLAST of MELO3C031262 vs. NCBI nr
Match: PLY72645.1 (hypothetical protein LSAT_3X110420 [Lactuca sativa] >PLY86780.1 hypothetical protein LSAT_4X147820 [Lactuca sativa] >PLY90509.1 hypothetical protein LSAT_2X20541 [Lactuca sativa] >PLY92864.1 hypothetical protein LSAT_5X181860 [Lactuca sativa])

HSP 1 Score: 129.0 bits (323), Expect = 1.6e-26
Identity = 65/67 (97.01%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 5  LKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCMLRSGRMN 64
          LKKDLRVSRVGPGG LNAFFFLLIGVISQRLAMVRKKGGT TLGERSTTESCMLRSGRMN
Sbjct: 5  LKKDLRVSRVGPGGSLNAFFFLLIGVISQRLAMVRKKGGTGTLGERSTTESCMLRSGRMN 64

Query: 65 RSRKGIY 72
          RSRKGIY
Sbjct: 65 RSRKGIY 71

[Close]

BLAST of MELO3C031262 vs. NCBI nr
Match: YP_004891660.1 (unnamed protein product [Nicotiana undulata] >YP_004891676.1 unnamed protein product [Nicotiana undulata] >YP_398917.1 hypothetical protein NitoCp121 [Nicotiana tomentosiformis] >YP_398933.1 hypothetical protein NitoCp122 [Nicotiana tomentosiformis] >AEO95727.1 hypothetical protein [synthetic construct] >TMW90653.1 hypothetical protein EJD97_015428 [Solanum chilense] >CAJ32484.1 hypothetical protein [Nicotiana tabacum] >BAE46708.1 hypothetical protein [Nicotiana sylvestris] >AEO95618.1 hypothetical protein [Nicotiana undulata])

HSP 1 Score: 128.3 bits (321), Expect = 2.7e-26
Identity = 65/67 (97.01%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 5  LKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCMLRSGRMN 64
          LKKDLRVSRVGPGG LNAFFFLLIGVISQRLA VRKKGGTSTLGERSTTESCMLRSGRMN
Sbjct: 5  LKKDLRVSRVGPGGSLNAFFFLLIGVISQRLARVRKKGGTSTLGERSTTESCMLRSGRMN 64

Query: 65 RSRKGIY 72
          RSRKGIY
Sbjct: 65 RSRKGIY 71

[Close]

BLAST of MELO3C031262 vs. NCBI nr
Match: EXB37177.1 (hypothetical protein L484_013541 [Morus notabilis])

HSP 1 Score: 128.3 bits (321), Expect = 2.7e-26
Identity = 65/67 (97.01%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 5  LKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCMLRSGRMN 64
          LKKDLRVSRVGPGG LNAFFFLLIGVISQRLAMVRKKGG STLGERSTTESCMLRSGRMN
Sbjct: 5  LKKDLRVSRVGPGGSLNAFFFLLIGVISQRLAMVRKKGGRSTLGERSTTESCMLRSGRMN 64

Query: 65 RSRKGIY 72
          RSRKGIY
Sbjct: 65 RSRKGIY 71

[Close]

BLAST of MELO3C031262 vs. NCBI nr
Match: KZM80789.1 (hypothetical protein DCAR_031655 [Daucus carota subsp. sativus])

HSP 1 Score: 126.7 bits (317), Expect = 7.9e-26
Identity = 66/70 (94.29%), Postives = 67/70 (95.71%), Query Frame = 0


Query: 2   PGDLKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCMLRSG 61
           PG LKKDLRVSRVGPGG LNAFFFLLIGV+SQRLAMVRKKGGTSTL ERSTTESCMLRSG
Sbjct: 39  PG-LKKDLRVSRVGPGGSLNAFFFLLIGVLSQRLAMVRKKGGTSTLRERSTTESCMLRSG 98

Query: 62  RMNRSRKGIY 72
           RMNRSRKGIY
Sbjct: 99  RMNRSRKGIY 107

[Close]

BLAST of MELO3C031262 vs. ExPASy TrEMBL
Match: A0A314Y2L9 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_20560 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.6e-27
Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 5  LKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCMLRSGRMN 64
          LKKDLRVSRVGPGG LNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCMLRSGRMN
Sbjct: 5  LKKDLRVSRVGPGGSLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCMLRSGRMN 64

Query: 65 RSRKGIY 72
          RSRKGIY
Sbjct: 65 RSRKGIY 71

[Close]

BLAST of MELO3C031262 vs. ExPASy TrEMBL
Match: A0A540LJL3 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_027794 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.6e-27
Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 5  LKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCMLRSGRMN 64
          LKKDLRVSRVGPGG LNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCMLRSGRMN
Sbjct: 5  LKKDLRVSRVGPGGSLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCMLRSGRMN 64

Query: 65 RSRKGIY 72
          RSRKGIY
Sbjct: 65 RSRKGIY 71

[Close]

BLAST of MELO3C031262 vs. ExPASy TrEMBL
Match: A0A2J6KC38 (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_2X20541 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 7.7e-27
Identity = 65/67 (97.01%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 5  LKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCMLRSGRMN 64
          LKKDLRVSRVGPGG LNAFFFLLIGVISQRLAMVRKKGGT TLGERSTTESCMLRSGRMN
Sbjct: 5  LKKDLRVSRVGPGGSLNAFFFLLIGVISQRLAMVRKKGGTGTLGERSTTESCMLRSGRMN 64

Query: 65 RSRKGIY 72
          RSRKGIY
Sbjct: 65 RSRKGIY 71

[Close]

BLAST of MELO3C031262 vs. ExPASy TrEMBL
Match: Q3C1P2 (Uncharacterized protein OS=Nicotiana sylvestris OX=4096 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.3e-26
Identity = 65/67 (97.01%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 5  LKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCMLRSGRMN 64
          LKKDLRVSRVGPGG LNAFFFLLIGVISQRLA VRKKGGTSTLGERSTTESCMLRSGRMN
Sbjct: 5  LKKDLRVSRVGPGGSLNAFFFLLIGVISQRLARVRKKGGTSTLGERSTTESCMLRSGRMN 64

Query: 65 RSRKGIY 72
          RSRKGIY
Sbjct: 65 RSRKGIY 71

[Close]

BLAST of MELO3C031262 vs. ExPASy TrEMBL
Match: Q3HKA5 (Uncharacterized protein OS=Nicotiana tabacum OX=4097 GN=trnI PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.3e-26
Identity = 65/67 (97.01%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 5  LKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCMLRSGRMN 64
          LKKDLRVSRVGPGG LNAFFFLLIGVISQRLA VRKKGGTSTLGERSTTESCMLRSGRMN
Sbjct: 5  LKKDLRVSRVGPGGSLNAFFFLLIGVISQRLARVRKKGGTSTLGERSTTESCMLRSGRMN 64

Query: 65 RSRKGIY 72
          RSRKGIY
Sbjct: 65 RSRKGIY 71

The following BLAST results are available for this feature:

BLAST of MELO3C031262 vs. NCBI nr


Match Name	E-value	Identity	Description
PQP98137.1	5.5e-27	98.51	hypothetical protein Pyn_20560 [Prunus yedoensis var. nudiflora] >TQD86668.1 hyp...	[more]
PLY72645.1	1.6e-26	97.01	hypothetical protein LSAT_3X110420 [Lactuca sativa] >PLY86780.1 hypothetical pro...	[more]
YP_004891660.1	2.7e-26	97.01	unnamed protein product [Nicotiana undulata] >YP_004891676.1 unnamed protein pro...	[more]
EXB37177.1	2.7e-26	97.01	hypothetical protein L484_013541 [Morus notabilis]	[more]
KZM80789.1	7.9e-26	94.29	hypothetical protein DCAR_031655 [Daucus carota subsp. sativus]	[more]

BLAST of MELO3C031262 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C031262 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A314Y2L9	2.6e-27	98.51	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_205...	[more]
A0A540LJL3	2.6e-27	98.51	Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_027794 PE=4 SV=1	[more]
A0A2J6KC38	7.7e-27	97.01	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_2X20541 PE=4 SV=1	[more]
Q3C1P2	1.3e-26	97.01	Uncharacterized protein OS=Nicotiana sylvestris OX=4096 PE=4 SV=1	[more]
Q3HKA5	1.3e-26	97.01	Uncharacterized protein OS=Nicotiana tabacum OX=4097 GN=trnI PE=4 SV=1	[more]

BLAST of MELO3C031262 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031262.1	MELO3C031262.1	mRNA