MELO3C031181 (gene) Melon (DHL92) v4

Overview
NameMELO3C031181
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionBeta-amylase
Locationchr08: 9532472 .. 9532681 (+)
RNA-Seq ExpressionMELO3C031181
SyntenyMELO3C031181
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTTGGTGGTGACTTTATGTTGGTTCTTTTGTTTGGCAATGGAAAGACTATTATGGTGGTGACTATTTCTCAAAACTTGAGTTGTCTGCAGGTGGCTTGTCTACTCCATTTCAAGTACAAGCCAAAACGTTTGAATACTTATAAAAAGAATGATCAGTACAAGTCAAAGTGTTCAAGTACTTATAAAAAGAATGGTCCGTAAGAATTAA

mRNA sequence

GTTTTGGTGGTGACTTTATGTTGGTTCTTTTGTTTGGCAATGGAAAGACTATTATGGTGGTGACTATTTCTCAAAACTTGAGTTGTCTGCAGGTGGCTTGTCTACTCCATTTCAAGTACAAGCCAAAACGTTTGAATACTTATAAAAAGAATGATCAGTACAAGTCAAAGTGTTCAAGTACTTATAAAAAGAATGGTCCGTAAGAATTAA

Coding sequence (CDS)

ATGTTGGTTCTTTTGTTTGGCAATGGAAAGACTATTATGGTGGTGACTATTTCTCAAAACTTGAGTTGTCTGCAGGTGGCTTGTCTACTCCATTTCAAGTACAAGCCAAAACGTTTGAATACTTATAAAAAGAATGATCAGTACAAGTCAAAGTGTTCAAGTACTTATAAAAAGAATGGTCCGTAA

Protein sequence

MLVLLFGNGKTIMVVTISQNLSCLQVACLLHFKYKPKRLNTYKKNDQYKSKCSSTYKKNGP
Homology
[Close]
BLAST of MELO3C031181 vs. NCBI nr
Match: TYK26663.1 (peptidyl-prolyl cis-trans isomerase CYP21-1 [Cucumis melo var. makuwa])

HSP 1 Score: 74.3 bits (181), Expect = 4.0e-10
Identity = 40/56 (71.43%), Postives = 42/56 (75.00%), Query Frame = 0 

Query: 11  TIMVVTISQNL-----SCLQVACLLHFKYKPKRLNTYKKNDQYKSKCSSTYKKNGP 62
           T++  T S NL      C  VACLLHFKYK KRLNTYKKNDQYKSK SSTYKKNGP
Sbjct: 268 TVVFDTGSSNLWVPSSKCFSVACLLHFKYKSKRLNTYKKNDQYKSKRSSTYKKNGP 323

[Close]
BLAST of MELO3C031181 vs. NCBI nr
Match: TYK07944.1 (aspartic proteinase A1-like [Cucumis melo var. makuwa])

HSP 1 Score: 71.2 bits (173), Expect = 3.4e-09
Identity = 39/56 (69.64%), Postives = 41/56 (73.21%), Query Frame = 0 

Query: 11 TIMVVTISQNL-----SCLQVACLLHFKYKPKRLNTYKKNDQYKSKCSSTYKKNGP 62
          T+   T S NL      C  VACLL+FKYK KRLNTYKKNDQYKSK SSTYKKNGP
Sbjct: 35 TVAFDTGSSNLWVPSSKCFSVACLLYFKYKSKRLNTYKKNDQYKSKRSSTYKKNGP 90

[Close]
BLAST of MELO3C031181 vs. ExPASy TrEMBL
Match: A0A5D3DSU7 (Beta-amylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G003180 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.9e-10
Identity = 40/56 (71.43%), Postives = 42/56 (75.00%), Query Frame = 0 

Query: 11  TIMVVTISQNL-----SCLQVACLLHFKYKPKRLNTYKKNDQYKSKCSSTYKKNGP 62
           T++  T S NL      C  VACLLHFKYK KRLNTYKKNDQYKSK SSTYKKNGP
Sbjct: 268 TVVFDTGSSNLWVPSSKCFSVACLLHFKYKSKRLNTYKKNDQYKSKRSSTYKKNGP 323

[Close]
BLAST of MELO3C031181 vs. ExPASy TrEMBL
Match: A0A5D3C9N6 (Beta-amylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00610 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.6e-09
Identity = 39/56 (69.64%), Postives = 41/56 (73.21%), Query Frame = 0 

Query: 11 TIMVVTISQNL-----SCLQVACLLHFKYKPKRLNTYKKNDQYKSKCSSTYKKNGP 62
          T+   T S NL      C  VACLL+FKYK KRLNTYKKNDQYKSK SSTYKKNGP
Sbjct: 35 TVAFDTGSSNLWVPSSKCFSVACLLYFKYKSKRLNTYKKNDQYKSKRSSTYKKNGP 90

The following BLAST results are available for this feature:
BLAST of MELO3C031181 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK26663.14.0e-1071.43peptidyl-prolyl cis-trans isomerase CYP21-1 [Cucumis melo var. makuwa][more]
TYK07944.13.4e-0969.64aspartic proteinase A1-like [Cucumis melo var. makuwa][more]
BLAST of MELO3C031181 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C031181 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DSU71.9e-1071.43Beta-amylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G003180 ... [more]
A0A5D3C9N61.6e-0969.64Beta-amylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00610 P... [more]
BLAST of MELO3C031181 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031181.1MELO3C031181.1mRNA