MELO3C031131 (gene) Melon (DHL92) v4

Overview
NameMELO3C031131
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionCACTA en-spm transposon protein
Locationchr05: 9158591 .. 9158884 (-)
RNA-Seq ExpressionMELO3C031131
SyntenyMELO3C031131
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTATTTTCTTCTAAAATTTATTGTTTTCGCACTGTCTTGTTTGAGAAGTTGTTATATACTACAAGAAAACGGAGCATTCTCGACGCCAAAAAAGACGTCGGCATAACGGACGTTGGGAAAAAGGGTGTTCTCGATGCAGTCGAGACTCCGCCAGGAGAAGCGTTGGGAAAAACCTTTTTCCCGACGCATCAAACAGGCGTCGGCCACGCGACGTAGGAAAAAGGCCAAATTAATTTTAAAAAACCATTATTCCCGACGCCGTGCACAGTGCGTTGGGAACGGCGTCGGGAATAG

mRNA sequence

TTATTTTCTTCTAAAATTTATTGTTTTCGCACTGTCTTGTTTGAGAAGTTGTTATATACTACAAGAAAACGGAGCATTCTCGACGCCAAAAAAGACGTCGGCATAACGGACGTTGGGAAAAAGGGTGTTCTCGATGCAGTCGAGACTCCGCCAGGAGAAGCGTTGGGAAAAACCTTTTTCCCGACGCATCAAACAGGCGTCGGCCACGCGACGTAGGAAAAAGGCCAAATTAATTTTAAAAAACCATTATTCCCGACGCCGTGCACAGTGCGTTGGGAACGGCGTCGGGAATAG

Coding sequence (CDS)

TTATTTTCTTCTAAAATTTATTGTTTTCGCACTGTCTTGTTTGAGAAGTTGTTATATACTACAAGAAAACGGAGCATTCTCGACGCCAAAAAAGACGTCGGCATAACGGACGTTGGGAAAAAGGGTGTTCTCGATGCAGTCGAGACTCCGCCAGGAGAAGCGTTGGGAAAAACCTTTTTCCCGACGCATCAAACAGGCGTCGGCCACGCGACGTAG

Protein sequence

LFSSKIYCFRTVLFEKLLYTTRKRSILDAKKDVGITDVGKKGVLDAVETPPGEALGKTFFPTHQTGVGHAT
Homology
BLAST of MELO3C031131 vs. NCBI nr
Match: TYK21534.1 (protein TIME FOR COFFEE isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 102.8 bits (255), Expect = 1.2e-18
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0

Query: 23  KRSILDAKKDVGITDVGKKGVLDAVETPPGEALGKTFFPTHQTGVGHAT 72
           KRSILDAKKDVGITDVGKKGVLDAVETPPGEALGKTFFPTHQTGVGHAT
Sbjct: 328 KRSILDAKKDVGITDVGKKGVLDAVETPPGEALGKTFFPTHQTGVGHAT 376

BLAST of MELO3C031131 vs. NCBI nr
Match: KAA0060226.1 (WAT1-related protein [Cucumis melo var. makuwa])

HSP 1 Score: 102.8 bits (255), Expect = 1.2e-18
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0

Query: 23  KRSILDAKKDVGITDVGKKGVLDAVETPPGEALGKTFFPTHQTGVGHAT 72
           KRSILDAKKDVGITDVGKKGVLDAVETPPGEALGKTFFPTHQTGVGHAT
Sbjct: 660 KRSILDAKKDVGITDVGKKGVLDAVETPPGEALGKTFFPTHQTGVGHAT 708

BLAST of MELO3C031131 vs. NCBI nr
Match: KAA0045596.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 80.9 bits (198), Expect = 5.0e-12
Identity = 40/54 (74.07%), Postives = 45/54 (83.33%), Query Frame = 0

Query: 17  LLYTTRKRSILDAKKDVGITDVGKKGVLDAVETPPGEALGKTFFPTHQTGVGHA 71
           L+ TTRK SI DAKKDVGI +VGKKG+LDAV+T  GEA GK+ F THQTGVGHA
Sbjct: 52  LVVTTRKWSICDAKKDVGIKNVGKKGILDAVKTASGEASGKSVFQTHQTGVGHA 105

BLAST of MELO3C031131 vs. NCBI nr
Match: KAA0051560.1 (trans-resveratrol di-O-methyltransferase-like [Cucumis melo var. makuwa] >TYK21262.1 trans-resveratrol di-O-methyltransferase-like [Cucumis melo var. makuwa])

HSP 1 Score: 68.6 bits (166), Expect = 2.6e-08
Identity = 31/35 (88.57%), Postives = 32/35 (91.43%), Query Frame = 0

Query: 37 DVGKKGVLDAVETPPGEALGKTFFPTHQTGVGHAT 72
          DVGKKG+ DAVET PGEA GKTFFPTHQTGVGHAT
Sbjct: 2  DVGKKGIPDAVETAPGEASGKTFFPTHQTGVGHAT 36

BLAST of MELO3C031131 vs. NCBI nr
Match: KAA0043601.1 (hypothetical protein E6C27_scaffold320G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 68.6 bits (166), Expect = 2.6e-08
Identity = 34/63 (53.97%), Postives = 42/63 (66.67%), Query Frame = 0

Query: 8  CFRTVLFEKLLYTTRKRSILDAKKDVGITDVGKKGVLDAVETPPGEALGKTFFPTHQTGV 67
          C +  +  KL+   +K    D KKDV I +V KKG+ DA+ET   +A GKTFFPTHQTGV
Sbjct: 2  CHKYEISSKLVVHYKKTEHSDTKKDVSIKNVEKKGIPDAIETASRKASGKTFFPTHQTGV 61

Query: 68 GHA 71
          GHA
Sbjct: 62 GHA 64

BLAST of MELO3C031131 vs. ExPASy TrEMBL
Match: A0A5A7V174 (WAT1-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold386G00550 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.9e-19
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0

Query: 23  KRSILDAKKDVGITDVGKKGVLDAVETPPGEALGKTFFPTHQTGVGHAT 72
           KRSILDAKKDVGITDVGKKGVLDAVETPPGEALGKTFFPTHQTGVGHAT
Sbjct: 660 KRSILDAKKDVGITDVGKKGVLDAVETPPGEALGKTFFPTHQTGVGHAT 708

BLAST of MELO3C031131 vs. ExPASy TrEMBL
Match: A0A5D3DD71 (Protein TIME FOR COFFEE isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G00180 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.9e-19
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0

Query: 23  KRSILDAKKDVGITDVGKKGVLDAVETPPGEALGKTFFPTHQTGVGHAT 72
           KRSILDAKKDVGITDVGKKGVLDAVETPPGEALGKTFFPTHQTGVGHAT
Sbjct: 328 KRSILDAKKDVGITDVGKKGVLDAVETPPGEALGKTFFPTHQTGVGHAT 376

BLAST of MELO3C031131 vs. ExPASy TrEMBL
Match: A0A5A7TTZ4 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001010 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.4e-12
Identity = 40/54 (74.07%), Postives = 45/54 (83.33%), Query Frame = 0

Query: 17  LLYTTRKRSILDAKKDVGITDVGKKGVLDAVETPPGEALGKTFFPTHQTGVGHA 71
           L+ TTRK SI DAKKDVGI +VGKKG+LDAV+T  GEA GK+ F THQTGVGHA
Sbjct: 52  LVVTTRKWSICDAKKDVGIKNVGKKGILDAVKTASGEASGKSVFQTHQTGVGHA 105

BLAST of MELO3C031131 vs. ExPASy TrEMBL
Match: A0A5D3DCG2 (Trans-resveratrol di-O-methyltransferase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold101G00130 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.2e-08
Identity = 31/35 (88.57%), Postives = 32/35 (91.43%), Query Frame = 0

Query: 37 DVGKKGVLDAVETPPGEALGKTFFPTHQTGVGHAT 72
          DVGKKG+ DAVET PGEA GKTFFPTHQTGVGHAT
Sbjct: 2  DVGKKGIPDAVETAPGEASGKTFFPTHQTGVGHAT 36

BLAST of MELO3C031131 vs. ExPASy TrEMBL
Match: A0A5A7TPY2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold320G00340 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.2e-08
Identity = 34/63 (53.97%), Postives = 42/63 (66.67%), Query Frame = 0

Query: 8  CFRTVLFEKLLYTTRKRSILDAKKDVGITDVGKKGVLDAVETPPGEALGKTFFPTHQTGV 67
          C +  +  KL+   +K    D KKDV I +V KKG+ DA+ET   +A GKTFFPTHQTGV
Sbjct: 2  CHKYEISSKLVVHYKKTEHSDTKKDVSIKNVEKKGIPDAIETASRKASGKTFFPTHQTGV 61

Query: 68 GHA 71
          GHA
Sbjct: 62 GHA 64

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK21534.11.2e-18100.00protein TIME FOR COFFEE isoform X1 [Cucumis melo var. makuwa][more]
KAA0060226.11.2e-18100.00WAT1-related protein [Cucumis melo var. makuwa][more]
KAA0045596.15.0e-1274.07NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
KAA0051560.12.6e-0888.57trans-resveratrol di-O-methyltransferase-like [Cucumis melo var. makuwa] >TYK212... [more]
KAA0043601.12.6e-0853.97hypothetical protein E6C27_scaffold320G00340 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7V1745.9e-19100.00WAT1-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold386... [more]
A0A5D3DD715.9e-19100.00Protein TIME FOR COFFEE isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A5A7TTZ42.4e-1274.07NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5D3DCG21.2e-0888.57Trans-resveratrol di-O-methyltransferase-like OS=Cucumis melo var. makuwa OX=119... [more]
A0A5A7TPY21.2e-0853.97Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031131.1MELO3C031131.1mRNA