MELO3C031008 (gene) Melon (DHL92) v4

Overview


Name	MELO3C031008
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	F-box/LRR-repeat protein At1g67190-like
Location	chr04: 30693247 .. 30699331 (+)
RNA-Seq Expression	MELO3C031008
Synteny	MELO3C031008

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGGGTTTGGGTTCCGGTCTTTTCGGTCTACCTCGACCTGAACCTCCAATATCGTTCCGGTCTTTTCGGTCTCCTCCGGCCATGTTCTCCCCCCCCCCCCCCCCCCCAAACGGCTTCTATTCTCCGTTCACCTGTGGCTGTGGCTTTCATCATCCTACTCGGAGATTTCCTTTCCTAGTTCGTGTTATCAGTTCGATTCCTCCAACAATGGCTTCAAATTCTCTCAAAATCATTCACATTCTTGCATTGAGGTAAGTTGTGCAGGTTTCTTGCTCTTCGTCGACCTTATCTTGTAAATTCTCGTCTGTACCTCAAATTTTCAACTGATACAGTTTTAAATCTTCTGTGCAATACTCTAGTCCCCCTTCTTTCGGTCGTTTGTGTTGATCATTCCTATTGCTTTACTCTGGATTTTCCTATGGTGAATTCAGATTTTGAATTGTTAATTCAGATTTTGAATTGTTGCTTACTTTCTTATATTTCATGGGTCAGTTTTTATGAGGCTTCTTTGAATTTTCTTAAACTAGGGTAATATCAAGCTCACAGAGTCTTCATTTTCTGTTGCTCTAACTGGACATGGAACACTTGCCAGTTGAAGTTATTGGAAACATACTTTCTCATCTAAAATCTGCTACGGTTACTTGTAAGAAATGGAGAGAGGCTTGGCAGAATCACCTCCATTCTTTGACTTCAACTCGAATGTTTGGCCTTATCCTGATGAAATTTCAACGTGGACTTTGAAGTTATCATAACACAAAAAGTACTTCAGACCACTGGACTTCAGAACTTGTCCAGTTTCATGGATGATGAAGTAGATGCATTCTTCTCGGTGATTTCTTGGCTCATGTATACGAGAGACGCAATCCGTTGACTTCACTATAATGTGAAGACTATTCCAAGTAGCAATGTAATTGAAAAGTGTGGTGGACAAAAACTTGAAACCTTAGATTGGCTAATAATCCGAGAAGCGGCATTGAACCGACGTATCATAAGTTGGTTGAAATGTCTATCTCTCAGTAATATCATCATATCTGCATTAGATTTGAACCTTCTTCTTGCAGCTTGTCTGAAGCTTGAAAAGTTAGCTTTAATTAACCCAGAAATTGTGATGTCAGATACGCAGACAGCAATGGAAGTTAGCATTTCTTCATTGAAGGATATCTTTGGTGGAAACCTCAGTTTAGAGAAGTTCACACTAGAGGCTGATACCCTTGAAATTTTACATTTAAGAGAATGTGCTATAGATATCTTTGAGCTCATTGGAAAAGCAAGTCTTGTAGATCGACGATTTTAGTGGTTCCAACTGAATGTAGGCGAGAACATATGAAATTGCGGACCTCTGCAGTTTTGCTTCGGATGTGAGGTCCAGCGTATGATTATAATGATGAAGATGTGGATATACTCAATTTCCATCTCTTTCCCTAAGTTAAGCTATTTATATTTGCGTTATTATCCAAGGCATGGAACCTTTCACCATAACTTTCGGGAATCGTTTCAGATGGAGAATGTGACCATAATAGACTTGGATGGAGCCACGTTAGTGATCCCTTCTCTAACCGGGTGGCTAAACTTTTTGAAAGATGCCCTAAGTTGAAAAAATTATAATTTGTGGGGTTGTATCGGAGATTAATACCCACGAGGAATGCCAAAACTTAGCTCACTTCATCACATATTTCGTTGAACTTGTGAGAAAACATCTGCATATTGAGGTCCAGTTTGATTTCGAATAGCATTTAGGCAACTTCGAAAGCGCAAATGTAACTACTTAGGTATAGTTTCCAGAATTGTCATCATCATCGAAGTTACGAGAAGTACGTTTTCTTCTCTTCAAGCAACTGTAAATCCATAAGTTCCTGGAAAGAAATAAGATCTCTTTATTTTCCTTACCACCCTACTAATATTTCTTATTGGCTTTCCTTCTTTTGATCTTTTCTTACATAACAATGTTCGCACTCGAACACTGTACCGATTTTGACATTTTACCGATGTTATGCTTTCCTTTGACCCAAGTGCCCGAGGCATTAAGAGATATATGTATTGCTTTTTGTCCCCTTGTTAACAAGAAATATCTTTTTACTATTGCTTTCCCATGAAATTTTGCTCCATGGCTGACATTTATCCTACACTCTTTGGGCCAAAAACAACTGAAGAAATCAAATCTGTCATCATTATTTTAGTTGTTTTACTCAATAATATCCTCCCATTTTCTACTTGTTGGTTACTTATGTATTTGTAGCTGTTTTTATGTCATGGATATGCCAAAGCCAAATAGTTCTCCTTACCAGTTTCAATTTGTTGCTACATGGTAATAGGTGCAATTTTTACAGGATTGGAAGCCCTTCAGGCTTCTATATTGAAATGAAAGAAGAGAGAAATAAAACTTGGTGATCAAATTTGATTTCGTTAGATTGATTTTTTTATTTTTATTTTGAGGTCTTGAGGATAGTATCTAAATGTTGAGAAATAGAAGAAGTCGAGAACCCAAGTAGATAAAATGATTGTAAAAGACTATGAAGTTCAGATTTTCAACCAATCGAAACCAGATAAAATATGATACCGCAAAGGTGACTCATTCTCTATTCTAGTCTTTATAGCTTACAAATACCTGAAGATCTATCAGATTTTGTGCAGATTACGCCTATCTACTTCATTACAATACCTCGACGAACCCATAAGGAAACAGAGTCAAAATATTGTACTGCTAGGCCATTCATTCGTGCAAGATTCGAGTCAATGAAGAAAATTATGTCCAGCAGCCCAAATTCCTGCTAGATGTTCTGCAGTCTCAGATTCCGAGTTCTAGATTTCCTGCATGCACGAGGTTTTCCTGTGACCCTTTCGAACTTTCCTGCTAACTACTTGAGTGCGTTTCATGTTGCCATAAGCACGGCCGGAACATCTGAACATTTTCTTTCACAATGGACAGCTCAAAGTTCTCCTCATAACACGAAGCTTTTCCTTGGCTCTTTGTGCTTTCGAATGAAAATTCTTTGTTTCCTCCAAGTACTGCAAAAATGAAGAGTAACAACAAAGTTGGATCTTAGGTTGAGAAAGATGTTGAAGGGACGACTTTACTGTGTTCTTGAACTTTAAAGAAAGAAATTCAAGGAAATAAAATTTGCATACATAGATTACAAGATTAGGATCGAACTACAAATCTGAATCCCTTTACTGTGAAAAGGTTTTGTATTTTATTTTTCAACTAAAGATACAATACATTCAAAAGAGAGAGATATCAGGTGACCAGTATATATCTTTACAGTTGCCAAACACGTATGCTGATAGATGCTATGCAACAATTTGTAGATGTACATACAGTTTACACATTAAGAGATATAGCAGTTATTATTTGAAATGTCAATCGTGCATTTATTTTCATATCATAAGGAAATAAAATGCAATTCTATCCTACTTGATATTGCTTCAAATTGTATCAGGTTAGGGATGGAGCAGTACATAGCCAGATGTTTTAGAAAAGGTACCTGTTGCTTTCTCTTCCTCTCAAGCTCTGCCTGTTAATTGTTACAGGAAAAAAAAGAGGATAAAATCTTATTAGGATTACAATAGTTGGCAATAAAAATCTGAGATATCAAATGTGTTCACGTGATACTTACCAAGGCCTGCTTAAGATGAGCATTTTCCTCTTTTAATTGGTTCAACTCTGCTTCTAACTCCACTGTGTAGGCCTGTTTCAAAGTAGGGAGGAAAATGCATATTAGTGTTACATCTTCTTATCATTTTATTGAATAACTATCAAAGCTGATACTAGAAAAAGAAAAATGCACCTGTTTTCTAGCTCTAGACCTTGCAGCTGACTCTCTATTCTTTATCATCCTTCTTTGTCTTCTTTCTACAACTTTTTCAACTGGCCCGTCAATTATCCTCTTCCTCCCTCTTAACCCACCCAAGTCCAACCCAAATTGATTTGAGCTATCCACCTGATTTGTACACATTCCTTCTGGGGATACTGGACTTACAGGCGCTGCCAACCCCATCGGTTGAGCAGGTGGATATCCTCCTCCCCCACCACCACCTCCGCCACCGTTCACCACTCTTCCACCATAACAAACTGCAGGTGGAGGCTGTGATGAGAACACACTGTTTCTTTTACCATTGCCAGCAAATCCTGATGCATCTCCAATAGTAGAGCCACCTTGGGGTACTGGTTGGTATGTCGTAATGCCACCTGCAGCGGCATTACCGCTAGCACCACCACCAGCTGCAGATGTATTGAGTCCCATAATAGGCCTGGAAACATAACCAGCACCAATGGCGTGGTTGCTATTTGGGTACATACCATATTGCTGGGACGGTGGCAATGGCTGCGGCACTCCTCCCCCAACGCAAGGTTCTCGAACAACTCCAGCTTTGATCAGAAAATCCTCCAGTGTCATCTCCCCAAACGTGGGTTGGCGTGTGGCAGATTCCGGATTCTGAGAGTTGGCATTACCACTGTTGCTATTTTGATTCCTGCCCTGCTGACTCTTATGTATCTCGGACCAAACCTCATCCACAGTTTTCCTACACAAGGGTGCAGGAAGTGTAAGCGAACCTTGGCGAGGTAGGCTTGCTTGTTTCTCTATGTTGCGTTTCTCAATAGACGCTCCTCTCACCGGCAAGTGGCCCTGAGCATTGCTCAATGCTGCCACGGCAGCAACCGCGGACGTCCCCGATTGACTGGCGTTAATTGCTTGGTTTTCCTCTGCTGTCCAAATGCTGGTGAGGAACTCATCCATGTTCATGGACCCAAAATTTTTGCCACTCTCACAAAGAGTATGTTGGAACTCATCCAATGTGAGTGAGTAAATGGAGGATTGCCTTCCAAGAGACGAGAATCTATGGTGCTTGAGCTGTTGTTCAGACTGTAATGGCGATTCCACTTCATCGTGTGAAATCATTTCTGATTCTTTTACAACCATTGTTTCTTTTTCTGAAGTCTATTTCAAAGATCAGTGACGAGCTTGAAGCTGCAACTTCAATGAAGGACCAAAAAAAAAAGAAAAAAAGGGAAAGATATGAGACTTAATTACCTTTAAAATTGTAATTAAAATTTTCAACTTATAAAACTATCAATGGCTAAGATGATCATCAAAACTATTGACCATAACATAGATTATATATATATATATATTGAATAATTTGATTAAACTCATATGGACAGATCCGTACATTACAAAAAAAAAAAAATCATGTTCACGAAAAAGTCGGGGAAATTTTGAAATCAAACATTACATACATAAACATCACAATAAACCTCACGAATTTAATTGGAAAATTAAAATATATAAATATTTGAAATGTTTGATGAAATGTCAAATACATACTTGAGAAGACCAAAAGTTTGTGTTTTTCTTTAAAAGAAATTTTATTCCACATCAGACCCCACTTATATTTCAAATAAGAAAACAAAATTAAAATAATACAGGAATAAATAAGTACCATAAAAGGTAAATTACAATCAAAGCAAAAGAGAATAAAAAACAACTTGGAAGTTATCAACTTCAATAGATTATTATTAATACCAAAACCCCATTACACTACCTTCCTTAATTTCATTACTATTATCTTTTTAATCTCTTCCGTAACTAAAAATCAAAAGGCACATTGAAATCAACTTGTAACAACAGGCCATCCTGCCCAATTTTTTTAACAATTCAGTTTAATGGACACCAACATCTACTTGGAAGACTCTGTTCAAATCTCTACCCCAATTCGTGCTAAAGTCGTCAAAAAGATTTCTACTGATCATTTTAATCAAGTGCTTAAAAATGCTAATTTTATTTTTTCAAAAACAAGAATGAAGCTTCAATGGCAGAAACAGAACAACCATTATTATTGAAGTTACCAGAAAGAATGAGAGAAGATGAAGAGAATTGGAGATCGAGTGAAGCTACTTCTGCGAGATTTGAAAAATGAAGCTTTGAGAGTTTATAAGCTCAAAACCATGGCTTCCAATCTAACAGAAGCCGCCATTAACGAAGCTTTCCCAAGCTCTGAGTCTTTGCAGAAATACGAAGCTTGAGAAGAAGATGAGAAAGAAGCAGAACTCCAAAAGGGCTTAAACTGCGGTCCTTTCCACTCAA

mRNA sequence

ATTTGGGTTTGGGTTCCGGTCTTTTCGGTCTACCTCGACCTGAACCTCCAATATCGTTCCGGTCTTTTCGGTCTCCTCCGGCCATGTTCTCCCCCCCCCCCCCCCCCCCAAACGGCTTCTATTCTCCGTTCACCTGTGGCTGTGGCTTTCATCATCCTACTCGGAGATTTCCTTTCCTAGTTCGTGTTATCAGTTCGATTCCTCCAACAATGGCTTCAAATTCTCTCAAAATCATTCACATTCTTGCATTGAGGTAAGTTGTGCAGGTTTCTTGCTCTTCGTCGACCTTATCTTGTAAATTCTCGTCTGTACCTCAAATTTTCAACTGATACAGTTTTAAATCTTCTGTGCAATACTCTAGTCCCCCTTCTTTCGGTCGTTTGTGTTGATCATTCCTATTGCTTTACTCTGGATTTTCCTATGGGTAATATCAAGCTCACAGAGTCTTCATTTTCTGTTGCTCTAACTGGACATGGAACACTTGCCAGTTGAAGTTATTGGAAACATACTTTCTCATCTAAAATCTGCTACGGTTACTTGTAAGAAATGGAGAGAGGCTTGGCAGAATCACCTCCATTCTTTGACTTCAACTCGAATGTTTGGCCTTATCCTGATGAAATTTCAACGTGGACTTTGAAGTTATCATAACACAAAAAGTACTTCAGACCACTGGACTTCAGAACTTGTCCAGTTTCATGGATGATGAAGTAGATGCATTCTTCTCGGTGATTTCTTGGCTCATGTATACGAGAGACGCAATCCGTTGACTTCACTATAATGTGAAGACTATTCCAAGTAGCAATGTAATTGAAAAGTGTGGTGGACAAAAACTTGAAACCTTAGATTGGCTAATAATCCGAGAAGCGGCATTGAACCGACGTATCATAAGTTGGTTGAAATGTCTATCTCTCAGTAATATCATCATATCTGCATTAGATTTGAACCTTCTTCTTGCAGCTTGTCTGAAGCTTGAAAAGTTAGCTTTAATTAACCCAGAAATTGTGATGTCAGATACGCAGACAGCAATGGAAGTTAGCATTTCTTCATTGAAGGATATCTTTGGTGGAAACCTCAGTTTAGAGAAGTTCACACTAGAGGCTGATACCCTTGAAATTTTACATTTAAGAGAATGTGCTATAGATATCTTTGAGCTCATTGGAAAAGCAAGTCTTGTAGATCGACGATTTTAGTGGTTCCAACTGAATGTAGGCGAGAACATATGAAATTGCGGACCTCTGCAGTTTTGCTTCGGATGTGAGGTCCAGCGTATGATTATAATGATGAAGATGTGGATATACTCAATTTCCATCTCTTTCCCTAAGTTAAGCTATTTATATTTGCGTTATTATCCAAGGCATGGAACCTTTCACCATAACTTTCGGGAATCGTTTCAGATGGAGAATGTGACCATAATAGACTTGGATGGAGCCACGTTAGTGATCCCTTCTCTAACCGGGTGGCTAAACTTTTTGAAAGATGCCCTAAGTTGAAAAAATTATAATTTGTGGGGTTGTATCGGAGATTAATACCCACGAGGAATGCCAAAACTTAGCTCACTTCATCACATATTTCGTTGAACTTGTGAGAAAACATCTGCATATTGAGGTCCAGTTTGATTTCGAATAGCATTTAGGCAACTTCGAAAGCGCAAATGTAACTACTTAGGTATAGTTTCCAGAATTGTCATCATCATCGAAGTTACGAGAAGTACGTTTTCTTCTCTTCAAGCAACTGTAAATCCATAAGTTCCTGGAAAGAAATAAGATCTCTTTATTTTCCTTACCACCCTACTAATATTTCTTATTGGCTTTCCTTCTTTTGATCTTTTCTTACATAACAATGTTCGCACTCGAACACTGTACCGATTTTGACATTTTACCGATGTTATGCTTTCCTTTGACCCAAGTGCCCGAGGCATTAAGAGATATATGTATTGCTTTTTGTCCCCTTGTTAACAAGAAATATCTTTTTACTATTGCTTTCCCATGAAATTTTGCTCCATGGCTGACATTTATCCTACACTCTTTGGGCCAAAAACAACTGAAGAAATCAAATCTGTCATCATTATTTTAGTTGTTTTACTCAATAATATCCTCCCATTTTCTACTTGTTGGTTACTTATGTATTTGTAGCTGTTTTTATGTCATGGATATGCCAAAGCCAAATAGTTCTCCTTACCAGTTTCAATTTGTTGCTACATGGTAATAGGTGCAATTTTTACAGGATTGGAAGCCCTTCAGGCTTCTATATTGAAATGAAAGAAGAGAGAAATAAAACTTGGTGATCAAATTTGATTTCGTTAGATTGATTTTTTTATTTTTATTTTGAGGTCTTGAGGATAGTATCTAAATGTTGAGAAATAGAAGAAGTCGAGAACCCAAGTAGATAAAATGATTGTAAAAGACTATGAAGTTCAGATTTTCAACCAATCGAAACCAGATAAAATATGATACCGCAAAGGTGACTCATTCTCTATTCTAGTCTTTATAGCTTACAAATACCTGAAGATCTATCAGATTTTGTGCAGATTACGCCTATCTACTTCATTACAATACCTCGACGAACCCATAAGGAAACAGAGTCAAAATATTGTACTGCTAGGCCATTCATTCGTGCAAGATTCGAGTCAATGAAGAAAATTATGTCCAGCAGCCCAAATTCCTGCTAGATGTTCTGCAGTCTCAGATTCCGAGTTCTAGATTTCCTGCATGCACGAGGTTAGGGATGGAGCAGTACATAGCCAGATGTTTTAGAAAAGAATGAAGCTTCAATGGCAGAAACAGAACAACCATTATTATTGAAGTTACCAGAAAGAATGAGAGAAGATGAAGAGAATTGGAGATCGAGTGAAGCTACTTCTGCGAGATTTGAAAAATGAAGCTTTGAGAGTTTATAAGCTCAAAACCATGGCTTCCAATCTAACAGAAGCCGCCATTAACGAAGCTTTCCCAAGCTCTGAGTCTTTGCAGAAATACGAAGCTTGAGAAGAAGATGAGAAAGAAGCAGAACTCCAAAAGGGCTTAAACTGCGGTCCTTTCCACTCAA

Coding sequence (CDS)

ATGATTATAATGATGAAGATGTGGATATACTCAATTTCCATCTCTTTCCCTAAGTTAAGCTATTTATATTTGCGTTATTATCCAAGGCATGGAACCTTTCACCATAACTTTCGGGAATCGTTTCAGATGGAGAATGTGACCATAATAGACTTGGATGGAGCCACGTTAGTGATCCCTTCTCTAACCGGGTGGCTAAACTTTTTGAAAGATGCCCTAAGTTGA

Protein sequence

MIIMMKMWIYSISISFPKLSYLYLRYYPRHGTFHHNFRESFQMENVTIIDLDGATLVIPSLTGWLNFLKDALS

Homology

[Close]

BLAST of MELO3C031008 vs. NCBI nr
Match: KAE8651088.1 (hypothetical protein Csa_002699 [Cucumis sativus])

HSP 1 Score: 79.7 bits (195), Expect = 1.1e-11
Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 0


Query: 9   IYSISISFPKLSYLYLRYYPRHGTFHHNFRESFQMENVTIIDL 52
           +YSISISF KLSYL L YYPRHGTFHHNFRESFQMENVTI++L
Sbjct: 167 LYSISISFSKLSYLSLHYYPRHGTFHHNFRESFQMENVTILEL 209

[Close]

BLAST of MELO3C031008 vs. ExPASy TrEMBL
Match: A0A0A0LEK3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G776870 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.5e-12
Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 0


Query: 9   IYSISISFPKLSYLYLRYYPRHGTFHHNFRESFQMENVTIIDL 52
           +YSISISF KLSYL L YYPRHGTFHHNFRESFQMENVTI++L
Sbjct: 104 LYSISISFSKLSYLSLHYYPRHGTFHHNFRESFQMENVTILEL 146

[Close]

BLAST of MELO3C031008 vs. ExPASy TrEMBL
Match: A0A6J1CTB9 (F-box/LRR-repeat protein At1g67190-like OS=Momordica charantia OX=3673 GN=LOC111014389 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 7.2e-04
Identity = 25/41 (60.98%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 11  SISISFPKLSYLYLRYYPRHGTFHHNFRESFQMENVTIIDL 52
           +ISISFPKLS+L L Y  +HG  HHN + S +MENVTI++L
Sbjct: 312 TISISFPKLSHLSLSYDLKHGAVHHNLQRSSRMENVTILEL 352

The following BLAST results are available for this feature:

BLAST of MELO3C031008 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651088.1	1.1e-11	86.05	hypothetical protein Csa_002699 [Cucumis sativus]	[more]

BLAST of MELO3C031008 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C031008 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEK3	5.5e-12	86.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G776870 PE=4 SV=1	[more]
A0A6J1CTB9	7.2e-04	60.98	F-box/LRR-repeat protein At1g67190-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of MELO3C031008 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031008.1	MELO3C031008.1	mRNA