MELO3C030997 (gene) Melon (DHL92) v4

Overview


Name	MELO3C030997
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr04: 29360140 .. 29361822 (+)
RNA-Seq Expression	MELO3C030997
Synteny	MELO3C030997

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAGTGCGTCGGGAGCGGCGTCGGGAATAGGGGTTTTTCCTGACGCCGCATGAGACGTCGGGAAAAGCGTTTAATGAGCGTCGGGAATTCCCCTTTTCCCGACGCATTTTGAGGGATTTCCCGATGCCACGTCACAGCGTCGGGAAATCCCCTTTAAAATCATTTCAGTTTTGTAATTTACAGAACCAAAACCGAGAGGGGAAATTAAGAAAGGAGAAGAAGTCGTCGCGATTTTCGTCGCCCTTCCGCCGTTGTTCCGCCACCGTCCGTCGCTGCCCTCCCTCGCCGCCGTCCGCCACTTTAGGTAAGTGGAATATGAAAATTTATTTAGTTTAAGTTTATGTTTTAGGGTTTTTTTTTTGATGAAAATTAGTTTAGGATTTTCTTTTGGAATAGATTTTTGTTTGTTAAATGTATTTTTGTATAGAGTGTGTGTAATTTGTGGTTGAATTGAAATTGAAATTTGAAATTTGAATGGTTTAGGATTTTTGTTTTAGAAAATTGAATTGAGGGGAGATTTTATAGTTAAATGACATCTAGAGGTTCACGCTTATGTTCGCTCGATCTAGAGATCTTTACGCCCAGAAAGAGTAAAGAATCATGACCTTACTAATTTGCCATTTCAAGCCCAACGGCATACCCAATCGATCGAACTCAAACTTCGAAGATGCGAGGAAGTCAATAGAGTAGAAGGATAGGGATAGATGCGAGGGAGAATGAAATTTTGCGTGCGAATCTAGGTTGTTTTGCCGTTGGGTGTAAACGAAAGGAAAAAAAAAAAACTAAAAGATTTTAGGGTCGAACTCTTGACTTAAATGTCTATGAGATCATTACCAATTAGGCGTGCATAAATATTTAGTGTTAAAATTTATTTTTAATAAACTAAACAATATAGCTGATCCAATTGTCATTCCCAAATTCAATTCCATTGCAATCTTCAACAGCATAACGTTATCTTTCGAGCTTCATATCTCCATCAATACTAACTCAATTTACGCATATAACCACTTGATTTGATGCGTTTTTTTACGATCTTTACATCTATAATCATAACCGTAGCATTTTATTAGCGTATCTTGACCTTGAATTCCCTTCAAAATTTCGTAAAACCAAGTCAAAACTTTGAAAGACCATAACTTTGAGCATAGTTGTCCGAATTGCGCAAATTTTTTTTTGATTCAATGTAACTTTTCGAGATCTACCCCTTTGGCAGCTTGTCCGCCTTTCATCCTCAAAAACGTTCGTTTTGACCCCCAAATTGGATTACACAATGTTTTTCACCAACGTTTCATGGTTTTGAAGTTTGAAACTACCATCTCCAAGTTCCTCTATGGTGCTAATTTTTTTATCTTCTTTCTTTTATATGTAGAAACAATACGAGGACATGAAAAATTAGGTGTGGCGGTACCCATATGTGGCTACAGTCCATGTTCGAACCAAGCGCATGTAAACGTCGAGCGGGGATAGAGAGCGGTATGTGCGGTCGAGGTGGGGGATGAGCTTGCTTGGATAATGCTTGCACCTCATTGCGGGCGTGTTCTCGGCATGCTTTCCTCTGTTCATTATGTTTATGCTTTTTCTAAGCATACGCACCTCGTTGGGAGACTATTCATTATGTTTATGTTTTTTATTTTGAGAACTATATTTTGTTGTAGTCAACCTATTCGTATTATTAATTT

mRNA sequence

ATGAACAGTGCGTCGGGAGCGGCGTCGGGAATAGGGAACCAAAACCGAGAGGGGAAATTAAGAAAGGAGAAGAAGTCGTCGCGATTTTCGTCGCCCTTCCGCCGTTGTTCCGCCACCGTCCGTCGCTGCCCTCCCTCGCCGCCGTCCGCCACTTTAGCTGATCCAATTGTCATTCCCAAATTCAATTCCATTGCAATCTTCAACAGCATAACATCTACCCCTTTGGCAGCTTGTCCGCCTTTCATCCTCAAAAACGTTCGTTTTGACCCCCAAATTGGATTACACAATAAACAATACGAGGACATGAAAAATTAGGTGTGGCGGTACCCATATGTGGCTACAGTCCATGTTCGAACCAAGCGCATGTAAACGTCGAGCGGGGATAGAGAGCGGTATGTGCGGTCGAGGTGGGGGATGAGCTTGCTTGGATAATGCTTGCACCTCATTGCGGGCGTGTTCTCGGCATGCTTTCCTCTGTTCATTATGTTTATGCTTTTTCTAAGCATACGCACCTCGTTGGGAGACTATTCATTATGTTTATGTTTTTTATTTTGAGAACTATATTTTGTTGTAGTCAACCTATTCGTATTATTAATTT

Coding sequence (CDS)

ATGAACAGTGCGTCGGGAGCGGCGTCGGGAATAGGGAACCAAAACCGAGAGGGGAAATTAAGAAAGGAGAAGAAGTCGTCGCGATTTTCGTCGCCCTTCCGCCGTTGTTCCGCCACCGTCCGTCGCTGCCCTCCCTCGCCGCCGTCCGCCACTTTAGCTGATCCAATTGTCATTCCCAAATTCAATTCCATTGCAATCTTCAACAGCATAACATCTACCCCTTTGGCAGCTTGTCCGCCTTTCATCCTCAAAAACGTTCGTTTTGACCCCCAAATTGGATTACACAATAAACAATACGAGGACATGAAAAATTAG

Protein sequence

MNSASGAASGIGNQNREGKLRKEKKSSRFSSPFRRCSATVRRCPPSPPSATLADPIVIPKFNSIAIFNSITSTPLAACPPFILKNVRFDPQIGLHNKQYEDMKN

Homology

[Close]

BLAST of MELO3C030997 vs. ExPASy TrEMBL
Match: A0A5A7TMA1 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G004390 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 6.0e-04
Identity = 30/42 (71.43%), Postives = 33/42 (78.57%), Query Frame = 0


Query: 13 NQNREGKL-RKEKKSSRFSSPFRRCSATVRRCPPSPPSATLA 54
          N+NREGK   K + SSRF SPFRRCS+ VR  PPSPPSATLA
Sbjct: 21 NRNREGKREEKPRSSSRFPSPFRRCSSAVRCRPPSPPSATLA 62

The following BLAST results are available for this feature:

BLAST of MELO3C030997 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C030997 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C030997 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TMA1	6.0e-04	71.43	Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G...	[more]

BLAST of MELO3C030997 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..30

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C030997.1	MELO3C030997.1	mRNA