MELO3C030822.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C030822.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr04: 17483503 .. 17486328 (-)
RNA-Seq ExpressionMELO3C030822.jh1
SyntenyMELO3C030822.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTTGGGCTCCCTCAGTATCAGAGCTTGTGTGGGGAACTCTTCACTTTTGGCGTAACCAAAACCAGACCTATCTTGCCCTTAGAGTTCAGTCGGTTAGGTTAAGTAGAATGCATGCAATTATAGTCAATTCTAGTGGAATGTTCTTATAAAAACTTAAAGTTTGCTGAGTTTGATATTGTATATGGAAATAATTGTATTTTTCCCTTAAATTTTGATGAAATTGCATTTCTTTTTTATTTGAGTCATATTCTTATTTAGAACATTGAAAATTTTGTTAATTCATGTTTTTGTAATGTTGAATGAAACAATGTTAGGGTCTGAAATCTTGGAGGAGTGTTGGGATGAGTATTTAGGAATTAATTCCTCTTTCTTGGAAGAGTCTAAATCTATCTAAAGGTCTTCTTCTCTGTTTCCAATCATTTGTGGTAATCTTATAAGTTCTTCAATTTTCGGTGGAAATTCTAGGATACTCTAAGGTAATTCTTGTTTTTTAATAGGTTTTGTTGCTTGTTTTGATGCAACTGTTGTGTTTTTCTTGGTTGATTATCAACTATTATTCCAATTGGTTCTAAAACCCAATTGTCCATACTCAAAGTGAAATCTTTTTGTATAATTAAGAGATTCTTCCATGTTAATTTTCTATTTACTACATAGGTGCTCTATCTTGAAATGCAAATGACTCAACTTAAGTTACTCTCCATCTTACAGTCATGCAAATCTTAGATCTCTCAAAAGTTTTCCTCTTTTGTTTCAATTGTACATAAGAGAAGAAATAGAAGATTTCTGAAGGTAGAATAATGAACAAGTAGAAGAAGATGAAGAGAAAGGTTAGTGAAAGAAGAAAGAAAACAAAGGTTAACTGGTTCTGTTAGGTTTATCTTTTTTATTGCTTTTCAATCTGTGTGAAGAATTTTATTAAAAGAACTCTCTCTCAACTTCATTTATGACTTTTTTTGCATGTAGAAATTTAAAGGATGTGCTTCAACAATGAGCCTAATGGTTACATCAGAAAATAGGTATTTTGTTTTGATTTCTTTTTGTCTAACCAACTTGGTTAGCATGTCGAAGCATTGCCAGAGGTATGGATCTTGACAACATAGGTTTCTATTTTCTCAAATGTTTTTCTAATGAAGTGATGCCTATTAACTATGTGTTTTATTATGTTGTGAAACTGGTGATTCTTAGTTAGATATATTATGCTCTAGTTATCACAATATATTTTGATTTTTGCTTGTTTGATTCTGAAATCATTCAGTAACTCTTTTTCTCTCAAAGTTTGAAATCCCCACATCACATTTGACTTATGGAGGGTATTGTGAGCTCTATTTGAACAAAAATGTGATTAATCACTTTTGCTTGCTTGTGTTATGGAGTTTCTTTCTTAGGTTGAAAGTTGTTTCAAATTTTTAAGTTTTAAAGCATGACATAACAAAGGGAAACGTTAACAAGCAAGAAAAAACAGTACACACATACATATACATGTGAATATGTGAGTCTAAAACCAAGTAGTTTTGCTTTCAAATTTTCAAGAATGAATTGACTTGATTGAATTCCAATTTTGTTCGTTCCAATTGCACGATTGAGTTCGATTTCTAAAAGATGTAGGTTGAAAAAGGAGGTGAGTTAACATGAAAAGGAAGAACCATAACTAGAAGAGCACTGGATTCATGGAGAAATGGGAGAGAGACTCCATGGCTCCCATTTGTGAAACATTTGCAATCGATATTAATGTCGATCTTGACAAGTAATGTTAATCTGTTTAAGTTGAGAGGTTTTGAATACTTCATGAAAATAAGTTTGATATAGTCCCTAATTTAATGTTGGTCCGGTAGGGATACAAATATAAGATCCGATCTTGGTTCTTTTTGCATGCAATTCTTGTGGATTGTTCTTAAAAAAAAAAAACTAAGTTTGCTGAATTTGAGATTGGGTATGCAAATAATTGTCTTTTTTACTTGAAATTTTTGATGAAATTGCATCTCTTTTGTTTGAGTCAAATTCTTCTTTTGAATATTGAAAATTTTCTTGATTCATGTTTTTGTAATGTTGAATGAGTTTGAAACAAAGTTGGGGGCTGAAATCTTGAAAGAATTTTGGGATGAGGATTGAGGAATTAATTCCTCTTAGAAGAATTTGAATCTATATAAAGGTCTTCTTTTCTGTTTCCAATCGTTTGAGGTAATCATGTAGGTTCTTTAATTCTTGGTGAAAATTCTAAAATACTCTGAGGTAATTCTTGCTTTCTTAACAGGTTTTGTTGTTTGTTTTCATGCCATTGTTGAAAATCTTGAGGTTGTTCTTGATTGTTCCTATGCTTGGTTTATCGCAAGAACTTCTTGATTGTTTCTTGGTTGATTATCAACTATTCTTCCCATACACAATGTGAAATCTTCTTGTATAAGAGTATTATTCCATGTTAATTTTCATTTACCATACAGGCGCTCTATCTTGAAATTCAAAGGACTCAACTTGAGTTACTCTCTGCCTTATAGTCATGCAAATTTAAGAACTATAAAAAAAAATCTCTTTTGTTTCAGACATTCAAAGAAGAGAAATTTCTCTCTTTCTCTTTCAGGTAGAGAAGATGTTTAAAGGTAGAATGATTAATAAGTAGAAGAAGATGATAAAAAGAAAGGTTTGGGAAAGAAGAAAGAACTACAGAGGTTAACTGGTTTGGCTAGGTTTATCTTCTTTGTTGCTTTTCAATTTGTGAAGAATTTTACAAAATAAATCTTTCCTAACCTCACTCTTGACTTCTTTTGTATGTAGAAATTTAAAGGATATGCTTCGACAATGAGCCTGATGGTTACATCAGAAAATAG

mRNA sequence

ATGCGTTGGGCTCCCTCAGTATCAGAGCTTGTGTGGGGAACTCTTCACTTTTGGCGTAACCAAAACCAGACCTATCTTGCCCTTAGAGTTCAGTCGAAATTTAAAGGATGTGCTTCAACAATGAGCCTAATGGTTACATCAGAAAATAGACATTCAAAGAAGAGAAATTTCTCTCTTTCTCTTTCAGAAGAAGATGATAAAAAGAAAGGTTTGGGAAAGAAGAAAGAACTACAGAGGTTAACTGGTTTGGCTAGGATATGCTTCGACAATGAGCCTGATGGTTACATCAGAAAATAG

Coding sequence (CDS)

ATGCGTTGGGCTCCCTCAGTATCAGAGCTTGTGTGGGGAACTCTTCACTTTTGGCGTAACCAAAACCAGACCTATCTTGCCCTTAGAGTTCAGTCGAAATTTAAAGGATGTGCTTCAACAATGAGCCTAATGGTTACATCAGAAAATAGACATTCAAAGAAGAGAAATTTCTCTCTTTCTCTTTCAGAAGAAGATGATAAAAAGAAAGGTTTGGGAAAGAAGAAAGAACTACAGAGGTTAACTGGTTTGGCTAGGATATGCTTCGACAATGAGCCTGATGGTTACATCAGAAAATAG

Protein sequence

MRWAPSVSELVWGTLHFWRNQNQTYLALRVQSKFKGCASTMSLMVTSENRHSKKRNFSLSLSEEDDKKKGLGKKKELQRLTGLARICFDNEPDGYIRK
Homology
[Close]
BLAST of MELO3C030822.jh1 vs. NCBI nr
Match: TYJ97149.1 (hypothetical protein E5676_scaffold174G00240 [Cucumis melo var. makuwa])

HSP 1 Score: 70.9 bits (172), Expect = 9.64e-12
Identity = 49/107 (45.79%), Postives = 59/107 (55.14%), Query Frame = 0 

Query: 1   MRWAPSVSELVWGTLHFWRNQNQTYLALRVQ---SKFKGCASTMSLMVTSENRHSKKRNF 60
           MRWAPSVSELVWGTLHFW NQN T LA RVQ   S     A ++S +V         +N 
Sbjct: 269 MRWAPSVSELVWGTLHFWPNQNLTCLAFRVQPVRSSRMRWAPSVSKLVWGTLHFWPNQNL 328

Query: 61  S-LSLSEEDD-----KKKGLGKKKELQRLTGLARICFDNEPDGYIRK 98
           + L+L  +       K KGL             RICF+NEP+GYIR+
Sbjct: 329 TFLTLRVQPVRCSILKCKGLNMSYSPPYGDRNLRICFNNEPNGYIRQ 375

[Close]
BLAST of MELO3C030822.jh1 vs. NCBI nr
Match: KAA0046424.1 (hypothetical protein E6C27_scaffold149G001800 [Cucumis melo var. makuwa])

HSP 1 Score: 65.5 bits (158), Expect = 7.77e-10
Identity = 29/31 (93.55%), Postives = 29/31 (93.55%), Query Frame = 0 

Query: 1   MRWAPSVSELVWGTLHFWRNQNQTYLALRVQ 31
           MRWAPSVSELVWGTLHFW NQNQT LALRVQ
Sbjct: 84  MRWAPSVSELVWGTLHFWPNQNQTCLALRVQ 114

[Close]
BLAST of MELO3C030822.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BDS4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00240 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 4.67e-12
Identity = 49/107 (45.79%), Postives = 59/107 (55.14%), Query Frame = 0 

Query: 1   MRWAPSVSELVWGTLHFWRNQNQTYLALRVQ---SKFKGCASTMSLMVTSENRHSKKRNF 60
           MRWAPSVSELVWGTLHFW NQN T LA RVQ   S     A ++S +V         +N 
Sbjct: 269 MRWAPSVSELVWGTLHFWPNQNLTCLAFRVQPVRSSRMRWAPSVSKLVWGTLHFWPNQNL 328

Query: 61  S-LSLSEEDD-----KKKGLGKKKELQRLTGLARICFDNEPDGYIRK 98
           + L+L  +       K KGL             RICF+NEP+GYIR+
Sbjct: 329 TFLTLRVQPVRCSILKCKGLNMSYSPPYGDRNLRICFNNEPNGYIRQ 375

[Close]
BLAST of MELO3C030822.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TTN6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G001800 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.76e-10
Identity = 29/31 (93.55%), Postives = 29/31 (93.55%), Query Frame = 0 

Query: 1   MRWAPSVSELVWGTLHFWRNQNQTYLALRVQ 31
           MRWAPSVSELVWGTLHFW NQNQT LALRVQ
Sbjct: 84  MRWAPSVSELVWGTLHFWPNQNQTCLALRVQ 114

The following BLAST results are available for this feature:
BLAST of MELO3C030822.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
TYJ97149.19.64e-1245.79hypothetical protein E5676_scaffold174G00240 [Cucumis melo var. makuwa][more]
KAA0046424.17.77e-1093.55hypothetical protein E6C27_scaffold149G001800 [Cucumis melo var. makuwa][more]
BLAST of MELO3C030822.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C030822.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BDS44.67e-1245.79Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TTN63.76e-1093.55Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of MELO3C030822.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..72

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030822.jh1.t1MELO3C030822.jh1.t1mRNA