MELO3C030802 (gene) Melon (DHL92) v4

Overview


Name	MELO3C030802
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	CACTA en-spm transposon protein
Location	chr04: 15666447 .. 15666703 (+)
RNA-Seq Expression	MELO3C030802
Synteny	MELO3C030802

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGACCAGGCTACTCAAAAGGCCTTGGTTGGGGACCCAAGCCGAAGGCCCGCAGAACGGCAAGTGCAAGCAGTTCGTCGATATCTTGTTCGCAGTACACACAAAAAGAGATTGAATTACAAGCTAAACTTCATGAAGCTTTGGAACGGATTGAAGTACAAGATAGAAATCACCAAGCATTAGCTTCACAAGTGGAAGCTATGAAAAAGATGATTGAAGACCTAACTCGTGCACAACAGGGACCACCACATGATCCCTA

mRNA sequence

CGACCAGGCTACTCAAAAGGCCTTGGTTGGGGACCCAAGCCGAAGGCCCGCAGAACGGCAAGTGCAAGCAGTTCGTCGATATCTTGTTCGCAGTACACACAAAAAGAGATTGAATTACAAGCTAAACTTCATGAAGCTTTGGAACGGATTGAAGTACAAGATAGAAATCACCAAGCATTAGCTTCACAAGTGGAAGCTATGAAAAAGATGATTGAAGACCTAACTCGTGCACAACAGGGACCACCACATGATCCCTA

Coding sequence (CDS)

CGACCAGGCTACTCAAAAGGCCTTGGTTGGGGACCCAAGCCGAAGGCCCGCAGAACGGCAAGTGCAAGCAGTTCGTCGATATCTTGTTCGCAGTACACACAAAAAGAGATTGAATTACAAGCTAAACTTCATGAAGCTTTGGAACGGATTGAAGTACAAGATAGAAATCACCAAGCATTAGCTTCACAAGTGGAAGCTATGAAAAAGATGATTGAAGACCTAACTCGTGCACAACAGGGACCACCACATGATCCC

Protein sequence

RPGYSKGLGWGPKPKARRTASASSSSISCSQYTQKEIELQAKLHEALERIEVQDRNHQALASQVEAMKKMIEDLTRAQQGPPHDP

Homology

[Close]

BLAST of MELO3C030802 vs. NCBI nr
Match: KAA0050852.1 (uncharacterized protein E6C27_scaffold404G001210 [Cucumis melo var. makuwa])

HSP 1 Score: 165.6 bits (418), Expect = 1.8e-37
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 1   RPGYSKGLGWGPKPKARRTASASSSSISCSQYTQKEIELQAKLHEALERIEVQDRNHQAL 60
           RPGYSKGLGWGPKPKARRTASASSSSISCSQYTQKEIELQAKLHEALERIEVQDRNHQAL
Sbjct: 164 RPGYSKGLGWGPKPKARRTASASSSSISCSQYTQKEIELQAKLHEALERIEVQDRNHQAL 223

Query: 61  ASQVEAMKKMIEDLTRAQQGPPHDP 86
           ASQVEAMKKMIEDLTRAQQGPPHDP
Sbjct: 224 ASQVEAMKKMIEDLTRAQQGPPHDP 248

[Close]

BLAST of MELO3C030802 vs. NCBI nr
Match: KAA0036425.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >KAA0049153.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa] >KAA0050864.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa] >KAA0051889.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa] >KAA0060883.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 160.2 bits (404), Expect = 7.7e-36
Identity = 83/85 (97.65%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 1   RPGYSKGLGWGPKPKARRTASASSSSISCSQYTQKEIELQAKLHEALERIEVQDRNHQAL 60
           RPGYSKGLGWGPKPKARRTASASSSS SCSQ TQKEIELQAKLHEALERIEVQDRNHQAL
Sbjct: 283 RPGYSKGLGWGPKPKARRTASASSSSTSCSQSTQKEIELQAKLHEALERIEVQDRNHQAL 342

Query: 61  ASQVEAMKKMIEDLTRAQQGPPHDP 86
           ASQVEAMKKMIEDLTRAQQGPPHDP
Sbjct: 343 ASQVEAMKKMIEDLTRAQQGPPHDP 367

[Close]

BLAST of MELO3C030802 vs. NCBI nr
Match: TYK22506.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 160.2 bits (404), Expect = 7.7e-36
Identity = 83/85 (97.65%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 1   RPGYSKGLGWGPKPKARRTASASSSSISCSQYTQKEIELQAKLHEALERIEVQDRNHQAL 60
           RPGYSKGLGWGPKPKARRTASASSSS SCSQ TQKEIELQAKLHEALERIEVQDRNHQAL
Sbjct: 435 RPGYSKGLGWGPKPKARRTASASSSSTSCSQSTQKEIELQAKLHEALERIEVQDRNHQAL 494

Query: 61  ASQVEAMKKMIEDLTRAQQGPPHDP 86
           ASQVEAMKKMIEDLTRAQQGPPHDP
Sbjct: 495 ASQVEAMKKMIEDLTRAQQGPPHDP 519

[Close]

BLAST of MELO3C030802 vs. NCBI nr
Match: KAA0040239.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 160.2 bits (404), Expect = 7.7e-36
Identity = 83/85 (97.65%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 1   RPGYSKGLGWGPKPKARRTASASSSSISCSQYTQKEIELQAKLHEALERIEVQDRNHQAL 60
           RPGYSKGLGWGPKPKARRTASASSSS SCSQ TQKEIELQAKLHEALERIEVQDRNHQAL
Sbjct: 379 RPGYSKGLGWGPKPKARRTASASSSSTSCSQSTQKEIELQAKLHEALERIEVQDRNHQAL 438

Query: 61  ASQVEAMKKMIEDLTRAQQGPPHDP 86
           ASQVEAMKKMIEDLTRAQQGPPHDP
Sbjct: 439 ASQVEAMKKMIEDLTRAQQGPPHDP 463

[Close]

BLAST of MELO3C030802 vs. NCBI nr
Match: KAA0047149.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 160.2 bits (404), Expect = 7.7e-36
Identity = 83/85 (97.65%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 1   RPGYSKGLGWGPKPKARRTASASSSSISCSQYTQKEIELQAKLHEALERIEVQDRNHQAL 60
           RPGYSKGLGWGPKPKARRTASASSSS SCSQ TQKEIELQAKLHEALERIEVQDRNHQAL
Sbjct: 220 RPGYSKGLGWGPKPKARRTASASSSSTSCSQSTQKEIELQAKLHEALERIEVQDRNHQAL 279

Query: 61  ASQVEAMKKMIEDLTRAQQGPPHDP 86
           ASQVEAMKKMIEDLTRAQQGPPHDP
Sbjct: 280 ASQVEAMKKMIEDLTRAQQGPPHDP 304

[Close]

BLAST of MELO3C030802 vs. ExPASy TrEMBL
Match: A0A5A7U4T2 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold404G001210 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 8.9e-38
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 1   RPGYSKGLGWGPKPKARRTASASSSSISCSQYTQKEIELQAKLHEALERIEVQDRNHQAL 60
           RPGYSKGLGWGPKPKARRTASASSSSISCSQYTQKEIELQAKLHEALERIEVQDRNHQAL
Sbjct: 164 RPGYSKGLGWGPKPKARRTASASSSSISCSQYTQKEIELQAKLHEALERIEVQDRNHQAL 223

Query: 61  ASQVEAMKKMIEDLTRAQQGPPHDP 86
           ASQVEAMKKMIEDLTRAQQGPPHDP
Sbjct: 224 ASQVEAMKKMIEDLTRAQQGPPHDP 248

[Close]

BLAST of MELO3C030802 vs. ExPASy TrEMBL
Match: A0A5A7T4P0 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1161G00310 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.7e-36
Identity = 83/85 (97.65%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 1   RPGYSKGLGWGPKPKARRTASASSSSISCSQYTQKEIELQAKLHEALERIEVQDRNHQAL 60
           RPGYSKGLGWGPKPKARRTASASSSS SCSQ TQKEIELQAKLHEALERIEVQDRNHQAL
Sbjct: 283 RPGYSKGLGWGPKPKARRTASASSSSTSCSQSTQKEIELQAKLHEALERIEVQDRNHQAL 342

Query: 61  ASQVEAMKKMIEDLTRAQQGPPHDP 86
           ASQVEAMKKMIEDLTRAQQGPPHDP
Sbjct: 343 ASQVEAMKKMIEDLTRAQQGPPHDP 367

[Close]

BLAST of MELO3C030802 vs. ExPASy TrEMBL
Match: A0A5D3DD82 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1734G00120 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.7e-36
Identity = 83/85 (97.65%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 1   RPGYSKGLGWGPKPKARRTASASSSSISCSQYTQKEIELQAKLHEALERIEVQDRNHQAL 60
           RPGYSKGLGWGPKPKARRTASASSSS SCSQ TQKEIELQAKLHEALERIEVQDRNHQAL
Sbjct: 282 RPGYSKGLGWGPKPKARRTASASSSSTSCSQSTQKEIELQAKLHEALERIEVQDRNHQAL 341

Query: 61  ASQVEAMKKMIEDLTRAQQGPPHDP 86
           ASQVEAMKKMIEDLTRAQQGPPHDP
Sbjct: 342 ASQVEAMKKMIEDLTRAQQGPPHDP 366

[Close]

BLAST of MELO3C030802 vs. ExPASy TrEMBL
Match: A0A5D3BMQ0 (Zinc finger protein ZPR1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold118G00250 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.7e-36
Identity = 83/85 (97.65%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 1   RPGYSKGLGWGPKPKARRTASASSSSISCSQYTQKEIELQAKLHEALERIEVQDRNHQAL 60
           RPGYSKGLGWGPKPKARRTASASSSS SCSQ TQKEIELQAKLHEALERIEVQDRNHQAL
Sbjct: 29  RPGYSKGLGWGPKPKARRTASASSSSTSCSQSTQKEIELQAKLHEALERIEVQDRNHQAL 88

Query: 61  ASQVEAMKKMIEDLTRAQQGPPHDP 86
           ASQVEAMKKMIEDLTRAQQGPPHDP
Sbjct: 89  ASQVEAMKKMIEDLTRAQQGPPHDP 113

[Close]

BLAST of MELO3C030802 vs. ExPASy TrEMBL
Match: A0A5D3C6Z8 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00370 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.7e-36
Identity = 83/85 (97.65%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 1   RPGYSKGLGWGPKPKARRTASASSSSISCSQYTQKEIELQAKLHEALERIEVQDRNHQAL 60
           RPGYSKGLGWGPKPKARRTASASSSS SCSQ TQKEIELQAKLHEALERIEVQDRNHQAL
Sbjct: 282 RPGYSKGLGWGPKPKARRTASASSSSTSCSQSTQKEIELQAKLHEALERIEVQDRNHQAL 341

Query: 61  ASQVEAMKKMIEDLTRAQQGPPHDP 86
           ASQVEAMKKMIEDLTRAQQGPPHDP
Sbjct: 342 ASQVEAMKKMIEDLTRAQQGPPHDP 366

The following BLAST results are available for this feature:

BLAST of MELO3C030802 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050852.1	1.8e-37	100.00	uncharacterized protein E6C27_scaffold404G001210 [Cucumis melo var. makuwa]	[more]
KAA0036425.1	7.7e-36	97.65	CACTA en-spm transposon protein [Cucumis melo var. makuwa] >KAA0049153.1 CACTA e...	[more]
TYK22506.1	7.7e-36	97.65	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0040239.1	7.7e-36	97.65	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0047149.1	7.7e-36	97.65	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C030802 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C030802 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U4T2	8.9e-38	100.00	Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7T4P0	3.7e-36	97.65	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3DD82	3.7e-36	97.65	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3BMQ0	3.7e-36	97.65	Zinc finger protein ZPR1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5D3C6Z8	3.7e-36	97.65	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of MELO3C030802 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 57..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C030802.1	MELO3C030802.1	mRNA