MELO3C030775 (gene) Melon (DHL92) v4

Overview


Name	MELO3C030775
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Transposon Tf2-1 polyprotein isoform X1
Location	chr04: 13086546 .. 13087060 (+)
RNA-Seq Expression	MELO3C030775
Synteny	MELO3C030775

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGCGAAGGTAAAGGTAAAGGAAAGCTGGCGAGCGACAGAGAAGGATTCGTGACATGCCATATGAGGACTCAGTTTTGCTTCCGCGTTTATGTTTCAGTGTTTTAATATTCCGTTTTTAATGAAAATTTAGTCTTCCCTCTTTTAAAAAAAAAGTGTCTCTTGTCATTGTTTCCTTTTAGTAACGACCTCAGCTTAGTATAAAGAGTTAGGTCGTTACAAGTTAATTGTTGATTCTTGAGAGAAAGATCAACAAGTGAGTCTTCTTGAATTGATTCCTTATCAATACTGTTGTAACACTATTGGTAAATAAATAAAATATCTATACCAAGATAGAGTTCTATCAAATTGGTATCAGAGCAACGATCTTGGAAGAAAAATGGTTCAAACAAGGATTGAGGAAAGGTTAGAGATGATTGACCAAGAAATTGCCGGAATGAAGAAAGAGATCGAGAAAATGCCTCCAATTGAATTAAGTTTGAGCGATATCATGAAGAATCTGGAAAAACAACAGTAA

mRNA sequence

AGGCGAAGGTAAAGGTAAAGGAAAGCTGGCGAGCGACAGAGAAGGATTCGTGACATGCCATATGAGGACTCAGTTTTGCTTCCGCAGCAACGATCTTGGAAGAAAAATGGTTCAAACAAGGATTGAGGAAAGGTTAGAGATGATTGACCAAGAAATTGCCGGAATGAAGAAAGAGATCGAGAAAATGCCTCCAATTGAATTAAGTTTGAGCGATATCATGAAGAATCTGGAAAAACAACAGTAA

Coding sequence (CDS)

ATGAGGACTCAGTTTTGCTTCCGCAGCAACGATCTTGGAAGAAAAATGGTTCAAACAAGGATTGAGGAAAGGTTAGAGATGATTGACCAAGAAATTGCCGGAATGAAGAAAGAGATCGAGAAAATGCCTCCAATTGAATTAAGTTTGAGCGATATCATGAAGAATCTGGAAAAACAACAGTAA

Protein sequence

MRTQFCFRSNDLGRKMVQTRIEERLEMIDQEIAGMKKEIEKMPPIELSLSDIMKNLEKQQ

Homology

[Close]

BLAST of MELO3C030775 vs. NCBI nr
Match: TYK23958.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 77.0 bits (188), Expect = 6.1e-11
Identity = 41/49 (83.67%), Postives = 44/49 (89.80%), Query Frame = 0


Query: 9   SNDLGRKMVQTRIEERLEMIDQEIAGMKKEIEKMPPIELSLSDIMKNLE 58
           SNDLGRKMVQ RIEERLE+IDQEI  +KKEI KMP IELSL+DIMKNLE
Sbjct: 210 SNDLGRKMVQKRIEERLELIDQEIVVLKKEIGKMPVIELSLNDIMKNLE 258

[Close]

BLAST of MELO3C030775 vs. NCBI nr
Match: KAA0050449.1 (histone-lysine N-methyltransferase ASHR1 isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 74.7 bits (182), Expect = 3.0e-10
Identity = 40/53 (75.47%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 5  FCFRSNDLGRKMVQTRIEERLEMIDQEIAGMKKEIEKMPPIELSLSDIMKNLE 58
          F ++SND G  MVQT+IEERLE+IDQEIAGMKKEI KM  IELSL+DI+KNLE
Sbjct: 12 FWYQSNDFGGIMVQTQIEERLELIDQEIAGMKKEISKMLLIELSLNDIVKNLE 64

[Close]

BLAST of MELO3C030775 vs. NCBI nr
Match: TYK03127.1 (histone-lysine N-methyltransferase ASHR1 isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 6.7e-10
Identity = 39/53 (73.58%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 5  FCFRSNDLGRKMVQTRIEERLEMIDQEIAGMKKEIEKMPPIELSLSDIMKNLE 58
          F ++SND G  MVQT+IEERLE+IDQEIAGMKK+I KM  IELSL+DI+KNLE
Sbjct: 12 FWYQSNDFGGIMVQTQIEERLELIDQEIAGMKKDISKMLLIELSLNDIVKNLE 64

[Close]

BLAST of MELO3C030775 vs. NCBI nr
Match: KAA0048764.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa] >TYK31569.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 73.2 bits (178), Expect = 8.8e-10
Identity = 40/45 (88.89%), Postives = 41/45 (91.11%), Query Frame = 0


Query: 16 MVQTRIEERLEMIDQEIAGMKKEIEKMPPIELSLSDIMKNLEKQQ 61
          MVQTRIEERLE+IDQEI GMKKEI KM  IELSLSDIMKNLEKQQ
Sbjct: 1  MVQTRIEERLELIDQEIVGMKKEIGKMRAIELSLSDIMKNLEKQQ 45

[Close]

BLAST of MELO3C030775 vs. NCBI nr
Match: KAA0056172.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 69.7 bits (169), Expect = 9.7e-09
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 0


Query: 16 MVQTRIEERLEMIDQEIAGMKKEIEKMPPIELSLSDIMKNLEKQQ 61
          MVQTR EERLE+IDQEIAGMKKEI KMP IE SL+DI KNLEKQQ
Sbjct: 1  MVQTRREERLELIDQEIAGMKKEIGKMPAIESSLNDIAKNLEKQQ 45

[Close]

BLAST of MELO3C030775 vs. ExPASy TrEMBL
Match: A0A5D3DKB1 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00160 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.9e-11
Identity = 41/49 (83.67%), Postives = 44/49 (89.80%), Query Frame = 0


Query: 9   SNDLGRKMVQTRIEERLEMIDQEIAGMKKEIEKMPPIELSLSDIMKNLE 58
           SNDLGRKMVQ RIEERLE+IDQEI  +KKEI KMP IELSL+DIMKNLE
Sbjct: 210 SNDLGRKMVQKRIEERLELIDQEIVVLKKEIGKMPVIELSLNDIMKNLE 258

[Close]

BLAST of MELO3C030775 vs. ExPASy TrEMBL
Match: A0A5A7UAD1 (Histone-lysine N-methyltransferase ASHR1 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00560 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.5e-10
Identity = 40/53 (75.47%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 5  FCFRSNDLGRKMVQTRIEERLEMIDQEIAGMKKEIEKMPPIELSLSDIMKNLE 58
          F ++SND G  MVQT+IEERLE+IDQEIAGMKKEI KM  IELSL+DI+KNLE
Sbjct: 12 FWYQSNDFGGIMVQTQIEERLELIDQEIAGMKKEISKMLLIELSLNDIVKNLE 64

[Close]

BLAST of MELO3C030775 vs. ExPASy TrEMBL
Match: A0A5D3BUH3 (Histone-lysine N-methyltransferase ASHR1 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00010 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.2e-10
Identity = 39/53 (73.58%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 5  FCFRSNDLGRKMVQTRIEERLEMIDQEIAGMKKEIEKMPPIELSLSDIMKNLE 58
          F ++SND G  MVQT+IEERLE+IDQEIAGMKK+I KM  IELSL+DI+KNLE
Sbjct: 12 FWYQSNDFGGIMVQTQIEERLELIDQEIAGMKKDISKMLLIELSLNDIVKNLE 64

[Close]

BLAST of MELO3C030775 vs. ExPASy TrEMBL
Match: A0A5A7U0E3 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold172G00630 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.2e-10
Identity = 40/45 (88.89%), Postives = 41/45 (91.11%), Query Frame = 0


Query: 16 MVQTRIEERLEMIDQEIAGMKKEIEKMPPIELSLSDIMKNLEKQQ 61
          MVQTRIEERLE+IDQEI GMKKEI KM  IELSLSDIMKNLEKQQ
Sbjct: 1  MVQTRIEERLELIDQEIVGMKKEIGKMRAIELSLSDIMKNLEKQQ 45

[Close]

BLAST of MELO3C030775 vs. ExPASy TrEMBL
Match: A0A5D3CI99 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00670 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.7e-09
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 0


Query: 16 MVQTRIEERLEMIDQEIAGMKKEIEKMPPIELSLSDIMKNLEKQQ 61
          MVQTR EERLE+IDQEIAGMKKEI KMP IE SL+DI KNLEKQQ
Sbjct: 1  MVQTRREERLELIDQEIAGMKKEIGKMPAIESSLNDIAKNLEKQQ 45

The following BLAST results are available for this feature:

BLAST of MELO3C030775 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK23958.1	6.1e-11	83.67	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0050449.1	3.0e-10	75.47	histone-lysine N-methyltransferase ASHR1 isoform X3 [Cucumis melo var. makuwa]	[more]
TYK03127.1	6.7e-10	73.58	histone-lysine N-methyltransferase ASHR1 isoform X3 [Cucumis melo var. makuwa]	[more]
KAA0048764.1	8.8e-10	88.89	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa] >TYK31569.1 t...	[more]
KAA0056172.1	9.7e-09	84.44	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C030775 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C030775 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DKB1	2.9e-11	83.67	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7UAD1	1.5e-10	75.47	Histone-lysine N-methyltransferase ASHR1 isoform X3 OS=Cucumis melo var. makuwa ...	[more]
A0A5D3BUH3	3.2e-10	73.58	Histone-lysine N-methyltransferase ASHR1 isoform X3 OS=Cucumis melo var. makuwa ...	[more]
A0A5A7U0E3	4.2e-10	88.89	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CI99	4.7e-09	84.44	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of MELO3C030775 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 18..38

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C030775.1	MELO3C030775.1	mRNA